RNA–Protein interactions for RNA: ENST00000395936.5

PMP22-202, Transcript of peripheral myelin protein 22, humanhuman

TSL 3 BASIC

Gene PMP22, Length 816 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-202ENST00000395936 POGZQ7Z3K3 1410 aa27.65■■■□□ 2.02
PMP22-202ENST00000395936 CLIP1P30622 1438 aa27.64■■■□□ 2.02
PMP22-202ENST00000395936 LRRIQ1Q96JM4 1722 aa27.64■■■□□ 2.01
PMP22-202ENST00000395936 YEATS2Q9ULM3 1422 aa27.63■■■□□ 2.01
PMP22-202ENST00000395936 MADDQ8WXG6 1647 aa27.63■■■□□ 2.01
PMP22-202ENST00000395936 CASKIN1Q8WXD9 1431 aa27.62■■■□□ 2.01
PMP22-202ENST00000395936 CCDC18Q5T9S5 1454 aa27.58■■■□□ 2.01
PMP22-202ENST00000395936 ILDR1Q86SU0 546 aaPredicted RBP27.55■■■□□ 2
PMP22-202ENST00000395936 ARHGAP5Q13017 1502 aa27.55■■■□□ 2
PMP22-202ENST00000395936 PCF11O94913 1555 aaKnown RBP27.55■■■□□ 2
PMP22-202ENST00000395936 SIGLEC1Q9BZZ2 1709 aa27.55■■■□□ 2
PMP22-202ENST00000395936 ATP10AO60312 1499 aa27.53■■■□□ 2
PMP22-202ENST00000395936 RIMS1Q86UR5 1692 aaKnown RBP27.52■■■□□ 2
PMP22-202ENST00000395936 ZNF518AQ6AHZ1 1483 aa27.51■■■□□ 2
PMP22-202ENST00000395936 AFAP1Q8N556 730 aa27.49■■□□□ 1.99
PMP22-202ENST00000395936 CDC42BPBQ9Y5S2 1711 aa27.49■■□□□ 1.99
PMP22-202ENST00000395936 FYCO1Q9BQS8 1478 aa27.49■■□□□ 1.99
PMP22-202ENST00000395936 C9orf84Q5VXU9 1444 aa27.49■■□□□ 1.99
PMP22-202ENST00000395936 MLECQ14165 292 aa27.46■■□□□ 1.99
PMP22-202ENST00000395936 KDM5CP41229 1560 aa27.46■■□□□ 1.99
PMP22-202ENST00000395936 LMTK3Q96Q04 1460 aa27.44■■□□□ 1.98
PMP22-202ENST00000395936 PREX2Q70Z35 1606 aa27.43■■□□□ 1.98
PMP22-202ENST00000395936 ARHGEF12Q9NZN5 1544 aa27.4■■□□□ 1.98
PMP22-202ENST00000395936 FER1L4A9Z1Z3 1794 aa27.4■■□□□ 1.98
PMP22-202ENST00000395936 MLH3Q9UHC1 1453 aa27.38■■□□□ 1.97
PMP22-202ENST00000395936 PLPPR3Q6T4P5 718 aa27.38■■□□□ 1.97
PMP22-202ENST00000395936 MYT1LQ9UL68 1186 aa27.38■■□□□ 1.97
PMP22-202ENST00000395936 ABCC1P33527 1531 aa27.37■■□□□ 1.97
PMP22-202ENST00000395936 CDC42BPAQ5VT25 1732 aa27.36■■□□□ 1.97
PMP22-202ENST00000395936 TRAPPC8Q9Y2L5 1435 aa27.35■■□□□ 1.97
PMP22-202ENST00000395936 REREQ9P2R6 1566 aa27.34■■□□□ 1.97
PMP22-202ENST00000395936 DIP2CQ9Y2E4 1556 aa27.34■■□□□ 1.97
PMP22-202ENST00000395936 ITSN2Q9NZM3 1697 aa27.33■■□□□ 1.97
PMP22-202ENST00000395936 GPATCH8Q9UKJ3 1502 aaKnown RBP27.3■■□□□ 1.96
PMP22-202ENST00000395936 HSPA2P54652 639 aa27.29■■□□□ 1.96
PMP22-202ENST00000395936 ABCA6Q8N139 1617 aa27.29■■□□□ 1.96
PMP22-202ENST00000395936 ZNF777Q9ULD5 760 aaPredicted RBP27.27■■□□□ 1.96
PMP22-202ENST00000395936 AGLP35573 1532 aa27.26■■□□□ 1.95
PMP22-202ENST00000395936 KIDINS220Q9ULH0 1771 aa27.25■■□□□ 1.95
PMP22-202ENST00000395936 SAMD9LQ8IVG5 1584 aa27.24■■□□□ 1.95
PMP22-202ENST00000395936 CEBPAP49715 358 aaPredicted RBP27.24■■□□□ 1.95
PMP22-202ENST00000395936 MTUS2Q5JR59 1369 aa27.22■■□□□ 1.95
PMP22-202ENST00000395936 CFDP1Q9UEE9 299 aaPredicted RBP27.22■■□□□ 1.95
PMP22-202ENST00000395936 CCNB3Q8WWL7 1395 aa27.22■■□□□ 1.95
PMP22-202ENST00000395936 KIAA1107Q9UPP5 1409 aa27.21■■□□□ 1.95
PMP22-202ENST00000395936 HNRNPMP52272 730 aaKnown RBP eCLIP27.2■■□□□ 1.94
PMP22-202ENST00000395936 FBXO41Q8TF61 875 aa27.2■■□□□ 1.94
PMP22-202ENST00000395936 SYCP2Q9BX26 1530 aa27.19■■□□□ 1.94
PMP22-202ENST00000395936 CEP162Q5TB80 1403 aa27.18■■□□□ 1.94
PMP22-202ENST00000395936 PLEKHH2Q8IVE3 1493 aa27.18■■□□□ 1.94
PMP22-202ENST00000395936 PREX1Q8TCU6 1659 aa27.17■■□□□ 1.94
PMP22-202ENST00000395936 SPAG9O60271 1321 aaKnown RBP27.16■■□□□ 1.94
PMP22-202ENST00000395936 ESF1Q9H501 851 aaKnown RBP27.16■■□□□ 1.94
PMP22-202ENST00000395936 SETD1BQ9UPS6 1966 aaKnown RBP27.14■■□□□ 1.94
PMP22-202ENST00000395936 EHBP1L1Q8N3D4 1523 aa27.11■■□□□ 1.93
PMP22-202ENST00000395936 C3P01024 1663 aa27.1■■□□□ 1.93
PMP22-202ENST00000395936 UHRF1BP1Q6BDS2 1440 aa27.09■■□□□ 1.93
PMP22-202ENST00000395936 CNTLNQ9NXG0 1405 aa27.09■■□□□ 1.93
PMP22-202ENST00000395936 ATP7AQ04656 1500 aa27.09■■□□□ 1.93
PMP22-202ENST00000395936 TIAM1Q13009 1591 aa27.08■■□□□ 1.93
PMP22-202ENST00000395936 INO80Q9ULG1 1556 aaPredicted RBP27.06■■□□□ 1.92
PMP22-202ENST00000395936 ZNF644Q9H582 1327 aaPredicted RBP27.05■■□□□ 1.92
PMP22-202ENST00000395936 A2MP01023 1474 aa27.03■■□□□ 1.92
PMP22-202ENST00000395936 SUPT6HQ7KZ85 1726 aaKnown RBP27.02■■□□□ 1.92
PMP22-202ENST00000395936 MBD5Q9P267 1494 aa27.02■■□□□ 1.92
PMP22-202ENST00000395936 DMRT2Q9Y5R5 561 aa27.02■■□□□ 1.92
PMP22-202ENST00000395936 PLXNC1O60486 1568 aa27.01■■□□□ 1.92
PMP22-202ENST00000395936 STRCQ7RTU9 1775 aa26.99■■□□□ 1.91
PMP22-202ENST00000395936 ZMYM3Q14202 1370 aa26.99■■□□□ 1.91
PMP22-202ENST00000395936 MROH2AA6NES4 1674 aa26.98■■□□□ 1.91
PMP22-202ENST00000395936 RTEL1-TNFRSF6BF6WH68 1400 aa26.98■■□□□ 1.91
PMP22-202ENST00000395936 LOC105371045A0A1W2PR82 267 aa26.97■■□□□ 1.91
PMP22-202ENST00000395936 CERKQ8TCT0 537 aa26.97■■□□□ 1.91
PMP22-202ENST00000395936 NPATQ14207 1427 aa26.97■■□□□ 1.91
PMP22-202ENST00000395936 NCOA2Q15596 1464 aa26.96■■□□□ 1.91
PMP22-202ENST00000395936 PPP6R1Q9UPN7 881 aa26.96■■□□□ 1.91
PMP22-202ENST00000395936 ADGBQ8N7X0 1667 aa26.95■■□□□ 1.91
PMP22-202ENST00000395936 RSPH4AQ5TD94 716 aa26.94■■□□□ 1.9
PMP22-202ENST00000395936 GGT6Q6P531 493 aa26.93■■□□□ 1.9
PMP22-202ENST00000395936 VPS8Q8N3P4 1428 aa26.91■■□□□ 1.9
PMP22-202ENST00000395936 CLTCQ00610 1675 aaKnown RBP26.89■■□□□ 1.9
PMP22-202ENST00000395936 DHX29Q7Z478 1369 aaKnown RBP26.89■■□□□ 1.9
PMP22-202ENST00000395936 PTPRTO14522 1441 aa26.89■■□□□ 1.89
PMP22-202ENST00000395936 CCDC141Q6ZP82 1450 aa26.87■■□□□ 1.89
PMP22-202ENST00000395936 CAMSAP2Q08AD1 1489 aa26.87■■□□□ 1.89
PMP22-202ENST00000395936 LRRC9Q6ZRR7 1453 aa26.86■■□□□ 1.89
PMP22-202ENST00000395936 PTPRKQ15262 1439 aa26.83■■□□□ 1.89
PMP22-202ENST00000395936 NCOA1Q15788 1441 aa26.83■■□□□ 1.89
PMP22-202ENST00000395936 MAP3K1Q13233 1512 aa26.81■■□□□ 1.88
PMP22-202ENST00000395936 ARHGEF5Q12774 1597 aa26.8■■□□□ 1.88
PMP22-202ENST00000395936 TSPY4P0CV99 314 aa26.79■■□□□ 1.88
PMP22-202ENST00000395936 TSPY10P0CW01 314 aa26.79■■□□□ 1.88
PMP22-202ENST00000395936 CAMSAP1Q5T5Y3 1602 aa26.79■■□□□ 1.88
PMP22-202ENST00000395936 KIF3BO15066 747 aa26.78■■□□□ 1.88
PMP22-202ENST00000395936 KANK4Q5T7N3 995 aaPredicted RBP26.77■■□□□ 1.88
PMP22-202ENST00000395936 ZNF142P52746 1687 aaPredicted RBP26.75■■□□□ 1.87
PMP22-202ENST00000395936 MYO3AQ8NEV4 1616 aa26.75■■□□□ 1.87
PMP22-202ENST00000395936 CEP170BQ9Y4F5 1589 aaPredicted RBP26.72■■□□□ 1.87
PMP22-202ENST00000395936 FAM135AQ9P2D6 1515 aa26.72■■□□□ 1.87
PMP22-202ENST00000395936 PLA2R1Q13018 1463 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms