RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 ABCA9Q8IUA7 1624 aa30.77■■■□□ 2.52
VCPKMT-202ENST00000395860 ZNF777Q9ULD5 760 aaPredicted RBP30.76■■■□□ 2.51
VCPKMT-202ENST00000395860 ZNF644Q9H582 1327 aaPredicted RBP30.74■■■□□ 2.51
VCPKMT-202ENST00000395860 ARHGAP5Q13017 1502 aa30.74■■■□□ 2.51
VCPKMT-202ENST00000395860 PLCH2O75038 1416 aa30.71■■■□□ 2.51
VCPKMT-202ENST00000395860 DNMT1P26358 1616 aaKnown RBP30.7■■■□□ 2.5
VCPKMT-202ENST00000395860 SAMD9LQ8IVG5 1584 aa30.69■■■□□ 2.5
VCPKMT-202ENST00000395860 ARAP3Q8WWN8 1544 aa30.66■■■□□ 2.5
VCPKMT-202ENST00000395860 PTPRKQ15262 1439 aa30.64■■■□□ 2.5
VCPKMT-202ENST00000395860 DAPK1P53355 1430 aa30.64■■■□□ 2.5
VCPKMT-202ENST00000395860 CROCC2H7BZ55 1655 aa30.6■■■□□ 2.49
VCPKMT-202ENST00000395860 EFCAB2Q5VUJ9 269 aa30.6■■■□□ 2.49
VCPKMT-202ENST00000395860 ABCC5O15440 1437 aa30.6■■■□□ 2.49
VCPKMT-202ENST00000395860 PLEKHH2Q8IVE3 1493 aa30.57■■■□□ 2.48
VCPKMT-202ENST00000395860 ARHGEF5Q12774 1597 aa30.57■■■□□ 2.48
VCPKMT-202ENST00000395860 GLI2P10070 1586 aa30.55■■■□□ 2.48
VCPKMT-202ENST00000395860 SYCP2Q9BX26 1530 aa30.55■■■□□ 2.48
VCPKMT-202ENST00000395860 CD109Q6YHK3 1445 aa30.55■■■□□ 2.48
VCPKMT-202ENST00000395860 DNAJC5Q9H3Z4 198 aa30.54■■■□□ 2.48
VCPKMT-202ENST00000395860 FANCAO15360 1455 aa30.54■■■□□ 2.48
VCPKMT-202ENST00000395860 CHIC2Q9UKJ5 165 aa30.54■■■□□ 2.48
VCPKMT-202ENST00000395860 DIP2BQ9P265 1576 aa30.53■■■□□ 2.48
VCPKMT-202ENST00000395860 HNRNPMP52272 730 aaKnown RBP eCLIP30.53■■■□□ 2.48
VCPKMT-202ENST00000395860 MBD5Q9P267 1494 aa30.52■■■□□ 2.48
VCPKMT-202ENST00000395860 SETD5Q9C0A6 1442 aa30.52■■■□□ 2.48
VCPKMT-202ENST00000395860 ADGBQ8N7X0 1667 aa30.52■■■□□ 2.48
VCPKMT-202ENST00000395860 MAP3K4Q9Y6R4 1608 aa30.52■■■□□ 2.48
VCPKMT-202ENST00000395860 KIAA1107Q9UPP5 1409 aa30.52■■■□□ 2.48
VCPKMT-202ENST00000395860 ABCC1P33527 1531 aa30.51■■■□□ 2.48
VCPKMT-202ENST00000395860 CFAP74Q9C0B2 1584 aa30.49■■■□□ 2.47
VCPKMT-202ENST00000395860 CCDC141Q6ZP82 1450 aa30.49■■■□□ 2.47
VCPKMT-202ENST00000395860 HFM1A2PYH4 1435 aa30.48■■■□□ 2.47
VCPKMT-202ENST00000395860 AKNAQ7Z591 1439 aa30.48■■■□□ 2.47
VCPKMT-202ENST00000395860 RSPH4AQ5TD94 716 aa30.48■■■□□ 2.47
VCPKMT-202ENST00000395860 GCC2Q8IWJ2 1684 aa30.48■■■□□ 2.47
VCPKMT-202ENST00000395860 SHANK2Q9UPX8 1470 aa30.47■■■□□ 2.47
VCPKMT-202ENST00000395860 RAB3GAP2Q9H2M9 1393 aa30.46■■■□□ 2.47
VCPKMT-202ENST00000395860 ROCK1Q13464 1354 aa30.45■■■□□ 2.47
VCPKMT-202ENST00000395860 ARHGEF12Q9NZN5 1544 aa30.45■■■□□ 2.46
VCPKMT-202ENST00000395860 FAM69CQ0P6D2 419 aa30.44■■■□□ 2.46
VCPKMT-202ENST00000395860 TSPY4P0CV99 314 aa30.43■■■□□ 2.46
VCPKMT-202ENST00000395860 TSPY10P0CW01 314 aa30.43■■■□□ 2.46
VCPKMT-202ENST00000395860 RRP7BPQ9NSQ0 103 aa30.43■■■□□ 2.46
VCPKMT-202ENST00000395860 NAIPQ13075 1403 aa30.43■■■□□ 2.46
VCPKMT-202ENST00000395860 C9orf84Q5VXU9 1444 aa30.41■■■□□ 2.46
VCPKMT-202ENST00000395860 KIF13AQ9H1H9 1805 aa30.41■■■□□ 2.46
VCPKMT-202ENST00000395860 ADGRL1O94910 1474 aa30.41■■■□□ 2.46
VCPKMT-202ENST00000395860 ADGRL2O95490 1459 aa30.41■■■□□ 2.46
VCPKMT-202ENST00000395860 MAST1Q9Y2H9 1570 aa30.37■■■□□ 2.45
VCPKMT-202ENST00000395860 CCER1Q8TC90 406 aaPredicted RBP30.37■■■□□ 2.45
VCPKMT-202ENST00000395860 ANKRD30AQ9BXX3 1397 aa30.37■■■□□ 2.45
VCPKMT-202ENST00000395860 TSPOAP1O95153 1857 aa30.36■■■□□ 2.45
VCPKMT-202ENST00000395860 NCOA1Q15788 1441 aa30.36■■■□□ 2.45
VCPKMT-202ENST00000395860 TRAPPC8Q9Y2L5 1435 aa30.35■■■□□ 2.45
VCPKMT-202ENST00000395860 NEO1Q92859 1461 aa30.34■■■□□ 2.45
VCPKMT-202ENST00000395860 SCAPERQ9BY12 1400 aa30.34■■■□□ 2.45
VCPKMT-202ENST00000395860 HRCP23327 699 aa30.34■■■□□ 2.45
VCPKMT-202ENST00000395860 PPRC1Q5VV67 1664 aaKnown RBP30.3■■■□□ 2.44
VCPKMT-202ENST00000395860 KDM6BO15054 1643 aa30.28■■■□□ 2.44
VCPKMT-202ENST00000395860 PLXNC1O60486 1568 aa30.26■■■□□ 2.43
VCPKMT-202ENST00000395860 AFAP1Q8N556 730 aa30.26■■■□□ 2.43
VCPKMT-202ENST00000395860 TEX14Q8IWB6 1497 aa30.24■■■□□ 2.43
VCPKMT-202ENST00000395860 DHX57Q6P158 1386 aaKnown RBP30.23■■■□□ 2.43
VCPKMT-202ENST00000395860 KIF15Q9NS87 1388 aa30.23■■■□□ 2.43
VCPKMT-202ENST00000395860 ZNF518AQ6AHZ1 1483 aa30.23■■■□□ 2.43
VCPKMT-202ENST00000395860 SPAG9O60271 1321 aaKnown RBP30.22■■■□□ 2.43
VCPKMT-202ENST00000395860 ZFYVE16Q7Z3T8 1539 aa30.21■■■□□ 2.43
VCPKMT-202ENST00000395860 RTEL1-TNFRSF6BF6WH68 1400 aa30.2■■■□□ 2.43
VCPKMT-202ENST00000395860 POGZQ7Z3K3 1410 aa30.2■■■□□ 2.43
VCPKMT-202ENST00000395860 INO80Q9ULG1 1556 aaPredicted RBP30.2■■■□□ 2.42
VCPKMT-202ENST00000395860 ANKRD50Q9ULJ7 1429 aa30.18■■■□□ 2.42
VCPKMT-202ENST00000395860 ATP7AQ04656 1500 aa30.18■■■□□ 2.42
VCPKMT-202ENST00000395860 DENND4BO75064 1496 aaPredicted RBP30.18■■■□□ 2.42
VCPKMT-202ENST00000395860 KDM5CP41229 1560 aa30.16■■■□□ 2.42
VCPKMT-202ENST00000395860 ACIN1Q9UKV3 1341 aaKnown RBP30.15■■■□□ 2.42
VCPKMT-202ENST00000395860 RICTORQ6R327 1708 aa30.15■■■□□ 2.42
VCPKMT-202ENST00000395860 MYT1LQ9UL68 1186 aa30.13■■■□□ 2.41
VCPKMT-202ENST00000395860 DUOX2Q9NRD8 1548 aa30.12■■■□□ 2.41
VCPKMT-202ENST00000395860 KIDINS220Q9ULH0 1771 aa30.12■■■□□ 2.41
VCPKMT-202ENST00000395860 TRIM52Q96A61 297 aa30.11■■■□□ 2.41
VCPKMT-202ENST00000395860 HECW2Q9P2P5 1572 aa30.1■■■□□ 2.41
VCPKMT-202ENST00000395860 ZEB1P37275 1124 aaPredicted RBP30.09■■■□□ 2.41
VCPKMT-202ENST00000395860 RAPGEF3O95398 923 aa30.07■■■□□ 2.4
VCPKMT-202ENST00000395860 MLH3Q9UHC1 1453 aa30.06■■■□□ 2.4
VCPKMT-202ENST00000395860 CLSPNQ9HAW4 1339 aa30.05■■■□□ 2.4
VCPKMT-202ENST00000395860 FRMPD1Q5SYB0 1578 aa30.05■■■□□ 2.4
VCPKMT-202ENST00000395860 TRHP20396 242 aaPredicted RBP30.04■■■□□ 2.4
VCPKMT-202ENST00000395860 ERBINQ96RT1 1412 aa30.04■■■□□ 2.4
VCPKMT-202ENST00000395860 ZMYM4Q5VZL5 1548 aa29.97■■■□□ 2.39
VCPKMT-202ENST00000395860 ABCA6Q8N139 1617 aa29.97■■■□□ 2.39
VCPKMT-202ENST00000395860 UNC13BO14795 1591 aa29.97■■■□□ 2.39
VCPKMT-202ENST00000395860 MPHOSPH9Q99550 1183 aa29.95■■■□□ 2.38
VCPKMT-202ENST00000395860 EIF2AK4Q9P2K8 1649 aaKnown RBP29.94■■■□□ 2.38
VCPKMT-202ENST00000395860 KDM5DQ9BY66 1539 aa29.94■■■□□ 2.38
VCPKMT-202ENST00000395860 DHX29Q7Z478 1369 aaKnown RBP29.93■■■□□ 2.38
VCPKMT-202ENST00000395860 PZPP20742 1482 aa29.92■■■□□ 2.38
VCPKMT-202ENST00000395860 NUP155O75694 1391 aa29.92■■■□□ 2.38
VCPKMT-202ENST00000395860 A2MP01023 1474 aa29.92■■■□□ 2.38
VCPKMT-202ENST00000395860 DIP2CQ9Y2E4 1556 aa29.91■■■□□ 2.38
VCPKMT-202ENST00000395860 SLC4A1APQ9BWU0 796 aaKnown RBP29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms