RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 DCAF11Q8TEB1 546 aa22.51■■□□□ 1.19
SIPA1-201ENST00000394224 FYCO1Q9BQS8 1478 aa22.5■■□□□ 1.19
SIPA1-201ENST00000394224 CFDP1Q9UEE9 299 aaPredicted RBP22.5■■□□□ 1.19
SIPA1-201ENST00000394224 ST20-MTHFSA0A0A6YYL1 179 aa22.49■■□□□ 1.19
SIPA1-201ENST00000394224 CDCA7LQ96GN5 454 aa22.49■■□□□ 1.19
SIPA1-201ENST00000394224 NUDCQ9Y266 331 aa22.49■■□□□ 1.19
SIPA1-201ENST00000394224 PTPN23Q9H3S7 1636 aa22.47■■□□□ 1.19
SIPA1-201ENST00000394224 IL27Q8NEV9 243 aa22.46■■□□□ 1.19
SIPA1-201ENST00000394224 PDS5BQ9NTI5 1447 aa22.44■■□□□ 1.18
SIPA1-201ENST00000394224 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.44■■□□□ 1.18
SIPA1-201ENST00000394224 CDK13Q14004 1512 aaKnown RBP22.44■■□□□ 1.18
SIPA1-201ENST00000394224 HMGXB3Q12766 1538 aa22.44■■□□□ 1.18
SIPA1-201ENST00000394224 NEFMP07197 916 aa22.43■■□□□ 1.18
SIPA1-201ENST00000394224 IPO9Q96P70 1041 aaKnown RBP22.42■■□□□ 1.18
SIPA1-201ENST00000394224 KDM6BO15054 1643 aa22.42■■□□□ 1.18
SIPA1-201ENST00000394224 ANO8Q9HCE9 1232 aaPredicted RBP22.42■■□□□ 1.18
SIPA1-201ENST00000394224 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
SIPA1-201ENST00000394224 MAP3K1Q13233 1512 aa22.4■■□□□ 1.18
SIPA1-201ENST00000394224 USP47Q96K76 1375 aa22.4■■□□□ 1.18
SIPA1-201ENST00000394224 TOPBP1Q92547 1522 aa22.38■■□□□ 1.17
SIPA1-201ENST00000394224 ARXQ96QS3 562 aa22.37■■□□□ 1.17
SIPA1-201ENST00000394224 PNISRQ8TF01 805 aaKnown RBP22.34■■□□□ 1.17
SIPA1-201ENST00000394224 RCAN3Q9UKA8 241 aa22.34■■□□□ 1.17
SIPA1-201ENST00000394224 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.17
SIPA1-201ENST00000394224 DENND4BO75064 1496 aaPredicted RBP22.33■■□□□ 1.16
SIPA1-201ENST00000394224 NCOA1Q15788 1441 aa22.33■■□□□ 1.16
SIPA1-201ENST00000394224 GAPVD1Q14C86 1478 aa22.33■■□□□ 1.16
SIPA1-201ENST00000394224 MAGI3Q5TCQ9 1506 aa22.32■■□□□ 1.16
SIPA1-201ENST00000394224 RGS3P49796 1198 aa22.32■■□□□ 1.16
SIPA1-201ENST00000394224 HNRNPMP52272 730 aaKnown RBP eCLIP22.31■■□□□ 1.16
SIPA1-201ENST00000394224 ANKRD30BQ9BXX2 1392 aa22.3■■□□□ 1.16
SIPA1-201ENST00000394224 CFAP43Q8NDM7 1665 aa22.3■■□□□ 1.16
SIPA1-201ENST00000394224 DAXXQ9UER7 740 aaPredicted RBP22.29■■□□□ 1.16
SIPA1-201ENST00000394224 ERICH6BQ5W0A0 696 aa22.29■■□□□ 1.16
SIPA1-201ENST00000394224 PDE4AP27815 886 aa22.29■■□□□ 1.16
SIPA1-201ENST00000394224 NUP155O75694 1391 aa22.28■■□□□ 1.16
SIPA1-201ENST00000394224 NBPF1Q3BBV0 1214 aa22.28■■□□□ 1.16
SIPA1-201ENST00000394224 KDM5BQ9UGL1 1544 aa22.28■■□□□ 1.16
SIPA1-201ENST00000394224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.27■■□□□ 1.16
SIPA1-201ENST00000394224 RRP1P56182 461 aaKnown RBP22.27■■□□□ 1.16
SIPA1-201ENST00000394224 C20orf194Q5TEA3 1177 aa22.25■■□□□ 1.15
SIPA1-201ENST00000394224 CRBNQ96SW2 442 aa22.24■■□□□ 1.15
SIPA1-201ENST00000394224 ABCA10Q8WWZ4 1543 aa22.23■■□□□ 1.15
SIPA1-201ENST00000394224 EIF5BO60841 1220 aaKnown RBP22.21■■□□□ 1.15
SIPA1-201ENST00000394224 CHMP7Q8WUX9 453 aaPredicted RBP22.21■■□□□ 1.15
SIPA1-201ENST00000394224 CC2D2AQ9P2K1 1620 aa22.21■■□□□ 1.15
SIPA1-201ENST00000394224 TSPY4P0CV99 314 aa22.21■■□□□ 1.15
SIPA1-201ENST00000394224 TSPY10P0CW01 314 aa22.21■■□□□ 1.15
SIPA1-201ENST00000394224 PRG4Q92954 1404 aaPredicted RBP22.21■■□□□ 1.15
SIPA1-201ENST00000394224 EFCAB5A4FU69 1503 aa22.19■■□□□ 1.14
SIPA1-201ENST00000394224 CCDC146Q8IYE0 955 aa22.19■■□□□ 1.14
SIPA1-201ENST00000394224 MYT1LQ9UL68 1186 aa22.18■■□□□ 1.14
SIPA1-201ENST00000394224 GRIN2BQ13224 1484 aa22.18■■□□□ 1.14
SIPA1-201ENST00000394224 URB2Q14146 1524 aaKnown RBP22.18■■□□□ 1.14
SIPA1-201ENST00000394224 DHX29Q7Z478 1369 aaKnown RBP22.16■■□□□ 1.14
SIPA1-201ENST00000394224 EPRSP07814 1512 aaKnown RBP22.16■■□□□ 1.14
SIPA1-201ENST00000394224 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
SIPA1-201ENST00000394224 NEUROD2Q15784 382 aa22.16■■□□□ 1.14
SIPA1-201ENST00000394224 ROCK2O75116 1388 aaKnown RBP22.16■■□□□ 1.14
SIPA1-201ENST00000394224 ABCC5O15440 1437 aa22.15■■□□□ 1.14
SIPA1-201ENST00000394224 SMG6Q86US8 1419 aaKnown RBP22.15■■□□□ 1.14
SIPA1-201ENST00000394224 SUPT6HQ7KZ85 1726 aaKnown RBP22.15■■□□□ 1.14
SIPA1-201ENST00000394224 BRPF3Q9ULD4 1205 aa22.15■■□□□ 1.14
SIPA1-201ENST00000394224 DAPK1P53355 1430 aa22.14■■□□□ 1.14
SIPA1-201ENST00000394224 PANK3Q9H999 370 aa22.14■■□□□ 1.13
SIPA1-201ENST00000394224 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.13
SIPA1-201ENST00000394224 RPRD2Q5VT52 1461 aaKnown RBP22.12■■□□□ 1.13
SIPA1-201ENST00000394224 DNMBPQ6XZF7 1577 aa22.11■■□□□ 1.13
SIPA1-201ENST00000394224 EHBP1L1Q8N3D4 1523 aa22.1■■□□□ 1.13
SIPA1-201ENST00000394224 PRDM2Q13029 1718 aa22.1■■□□□ 1.13
SIPA1-201ENST00000394224 MYBBP1AQ9BQG0 1328 aaKnown RBP22.1■■□□□ 1.13
SIPA1-201ENST00000394224 UGGT2Q9NYU1 1516 aa22.1■■□□□ 1.13
SIPA1-201ENST00000394224 PLEKHD1A6NEE1 506 aa22.1■■□□□ 1.13
SIPA1-201ENST00000394224 SPRYD3Q8NCJ5 442 aa22.06■■□□□ 1.12
SIPA1-201ENST00000394224 ADAMTS8Q9UP79 889 aa22.06■■□□□ 1.12
SIPA1-201ENST00000394224 LRRIQ1Q96JM4 1722 aa22.06■■□□□ 1.12
SIPA1-201ENST00000394224 NLRP13Q86W25 1043 aa22.05■■□□□ 1.12
SIPA1-201ENST00000394224 BACH2Q9BYV9 841 aa22.05■■□□□ 1.12
SIPA1-201ENST00000394224 SPATA31E1Q6ZUB1 1445 aa22.04■■□□□ 1.12
SIPA1-201ENST00000394224 KIF15Q9NS87 1388 aa22.04■■□□□ 1.12
SIPA1-201ENST00000394224 WDR43Q15061 677 aaKnown RBP eCLIP22.04■■□□□ 1.12
SIPA1-201ENST00000394224 TCERG1O14776 1098 aaKnown RBP22.03■■□□□ 1.12
SIPA1-201ENST00000394224 TEX14Q8IWB6 1497 aa22.02■■□□□ 1.12
SIPA1-201ENST00000394224 KTN1Q86UP2 1357 aaKnown RBP22.01■■□□□ 1.11
SIPA1-201ENST00000394224 CANXP27824 592 aaKnown RBP22■■□□□ 1.11
SIPA1-201ENST00000394224 RALBP1Q15311 655 aa21.99■■□□□ 1.11
SIPA1-201ENST00000394224 FRAT1Q92837 279 aaPredicted RBP21.99■■□□□ 1.11
SIPA1-201ENST00000394224 CTTNBP2Q8WZ74 1663 aa21.98■■□□□ 1.11
SIPA1-201ENST00000394224 SLKQ9H2G2 1235 aaPredicted RBP21.98■■□□□ 1.11
SIPA1-201ENST00000394224 ANKRD50Q9ULJ7 1429 aa21.98■■□□□ 1.11
SIPA1-201ENST00000394224 PLB1Q6P1J6 1458 aa21.97■■□□□ 1.11
SIPA1-201ENST00000394224 ANKRD30AQ9BXX3 1397 aa21.97■■□□□ 1.11
SIPA1-201ENST00000394224 BCL2L13Q9BXK5 485 aa21.96■■□□□ 1.11
SIPA1-201ENST00000394224 KIAA1107Q9UPP5 1409 aa21.94■■□□□ 1.1
SIPA1-201ENST00000394224 RRP7AQ9Y3A4 280 aaKnown RBP21.94■■□□□ 1.1
SIPA1-201ENST00000394224 NFKBIBQ15653 356 aa21.94■■□□□ 1.1
SIPA1-201ENST00000394224 KNSTRNQ9Y448 316 aa21.94■■□□□ 1.1
SIPA1-201ENST00000394224 ZNF608Q9ULD9 1512 aaPredicted RBP21.94■■□□□ 1.1
SIPA1-201ENST00000394224 JPH4Q96JJ6 628 aa21.93■■□□□ 1.1
SIPA1-201ENST00000394224 FRAT2O75474 233 aaPredicted RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms