RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 RBM19Q9Y4C8 960 aaKnown RBP19.32■□□□□ 0.68
GAPVD1-205ENST00000394084 ANP32EQ9BTT0 268 aa19.32■□□□□ 0.68
GAPVD1-205ENST00000394084 SLC4A1APQ9BWU0 796 aaKnown RBP19.32■□□□□ 0.68
GAPVD1-205ENST00000394084 CNTLNQ9NXG0 1405 aa19.31■□□□□ 0.68
GAPVD1-205ENST00000394084 MRC2Q9UBG0 1479 aa19.3■□□□□ 0.68
GAPVD1-205ENST00000394084 ABCC5O15440 1437 aa19.3■□□□□ 0.68
GAPVD1-205ENST00000394084 FAM9BQ8IZU0 186 aa19.3■□□□□ 0.68
GAPVD1-205ENST00000394084 ANKRD30BQ9BXX2 1392 aa19.29■□□□□ 0.68
GAPVD1-205ENST00000394084 CCDC7Q96M83 1385 aa19.29■□□□□ 0.68
GAPVD1-205ENST00000394084 PRKRIP1Q9H875 184 aaPredicted RBP19.26■□□□□ 0.67
GAPVD1-205ENST00000394084 NUP153P49790 1475 aaKnown RBP19.26■□□□□ 0.67
GAPVD1-205ENST00000394084 CNGB1Q14028 1251 aaPredicted RBP19.26■□□□□ 0.67
GAPVD1-205ENST00000394084 ROCK1Q13464 1354 aa19.26■□□□□ 0.67
GAPVD1-205ENST00000394084 NCOA1Q15788 1441 aa19.26■□□□□ 0.67
GAPVD1-205ENST00000394084 RPRD2Q5VT52 1461 aaKnown RBP19.26■□□□□ 0.67
GAPVD1-205ENST00000394084 DISP1Q96F81 1524 aa19.25■□□□□ 0.67
GAPVD1-205ENST00000394084 MRS2Q9HD23 443 aa19.25■□□□□ 0.67
GAPVD1-205ENST00000394084 ZNF777Q9ULD5 760 aaPredicted RBP19.25■□□□□ 0.67
GAPVD1-205ENST00000394084 CDK11AQ9UQ88 783 aaPredicted RBP19.24■□□□□ 0.67
GAPVD1-205ENST00000394084 KIAA0556O60303 1618 aa19.24■□□□□ 0.67
GAPVD1-205ENST00000394084 DNMT1P26358 1616 aaKnown RBP19.23■□□□□ 0.67
GAPVD1-205ENST00000394084 KIAA0586Q9BVV6 1533 aa19.23■□□□□ 0.67
GAPVD1-205ENST00000394084 TEX14Q8IWB6 1497 aa19.22■□□□□ 0.67
GAPVD1-205ENST00000394084 ZNF326Q5BKZ1 582 aaKnown RBP19.22■□□□□ 0.67
GAPVD1-205ENST00000394084 PRG4Q92954 1404 aaPredicted RBP19.22■□□□□ 0.67
GAPVD1-205ENST00000394084 KIF7Q2M1P5 1343 aa19.21■□□□□ 0.67
GAPVD1-205ENST00000394084 CFDP1Q9UEE9 299 aaPredicted RBP19.21■□□□□ 0.67
GAPVD1-205ENST00000394084 POLR3GLQ9BT43 218 aa19.21■□□□□ 0.67
GAPVD1-205ENST00000394084 IFT140Q96RY7 1462 aa19.2■□□□□ 0.66
GAPVD1-205ENST00000394084 RAPGEF6Q8TEU7 1601 aa19.19■□□□□ 0.66
GAPVD1-205ENST00000394084 FBLN2P98095 1184 aa19.18■□□□□ 0.66
GAPVD1-205ENST00000394084 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
GAPVD1-205ENST00000394084 CAMSAP2Q08AD1 1489 aa19.15■□□□□ 0.66
GAPVD1-205ENST00000394084 PZPP20742 1482 aa19.14■□□□□ 0.66
GAPVD1-205ENST00000394084 PLB1Q6P1J6 1458 aa19.14■□□□□ 0.66
GAPVD1-205ENST00000394084 SPATA31E1Q6ZUB1 1445 aa19.14■□□□□ 0.65
GAPVD1-205ENST00000394084 TROQ12816 1431 aaPredicted RBP19.14■□□□□ 0.65
GAPVD1-205ENST00000394084 CHMP7Q8WUX9 453 aaPredicted RBP19.14■□□□□ 0.65
GAPVD1-205ENST00000394084 PKD2Q13563 968 aa19.12■□□□□ 0.65
GAPVD1-205ENST00000394084 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
GAPVD1-205ENST00000394084 GPATCH8Q9UKJ3 1502 aaKnown RBP19.1■□□□□ 0.65
GAPVD1-205ENST00000394084 ZBED9Q6R2W3 1325 aa19.1■□□□□ 0.65
GAPVD1-205ENST00000394084 KIF14Q15058 1648 aa19.09■□□□□ 0.65
GAPVD1-205ENST00000394084 SENP3-EIF4A1A0A087X0R7 540 aa19.09■□□□□ 0.65
GAPVD1-205ENST00000394084 PPP4R2Q9NY27 417 aa19.08■□□□□ 0.65
GAPVD1-205ENST00000394084 KIAA1107Q9UPP5 1409 aa19.07■□□□□ 0.64
GAPVD1-205ENST00000394084 USP47Q96K76 1375 aa19.07■□□□□ 0.64
GAPVD1-205ENST00000394084 B4GALNT3Q6L9W6 998 aa19.07■□□□□ 0.64
GAPVD1-205ENST00000394084 MSH5O43196 834 aa19.06■□□□□ 0.64
GAPVD1-205ENST00000394084 ANKRD30AQ9BXX3 1397 aa19.04■□□□□ 0.64
GAPVD1-205ENST00000394084 ITSN2Q9NZM3 1697 aa19.03■□□□□ 0.64
GAPVD1-205ENST00000394084 CEP170Q5SW79 1584 aa19.03■□□□□ 0.64
GAPVD1-205ENST00000394084 ERICH6BQ5W0A0 696 aa19.03■□□□□ 0.64
GAPVD1-205ENST00000394084 JPH4Q96JJ6 628 aa19.03■□□□□ 0.64
GAPVD1-205ENST00000394084 ADGBQ8N7X0 1667 aa19.02■□□□□ 0.64
GAPVD1-205ENST00000394084 ANKRD50Q9ULJ7 1429 aa19.02■□□□□ 0.64
GAPVD1-205ENST00000394084 MBD5Q9P267 1494 aa19.02■□□□□ 0.63
GAPVD1-205ENST00000394084 DHX29Q7Z478 1369 aaKnown RBP19.01■□□□□ 0.63
GAPVD1-205ENST00000394084 NUP155O75694 1391 aa19.01■□□□□ 0.63
GAPVD1-205ENST00000394084 POLR1AO95602 1720 aaPredicted RBP19.01■□□□□ 0.63
GAPVD1-205ENST00000394084 KDM2AQ9Y2K7 1162 aa19.01■□□□□ 0.63
GAPVD1-205ENST00000394084 BCORL1Q5H9F3 1711 aa19.01■□□□□ 0.63
GAPVD1-205ENST00000394084 PLEKHD1A6NEE1 506 aa19■□□□□ 0.63
GAPVD1-205ENST00000394084 ERCC6Q03468 1493 aa19■□□□□ 0.63
GAPVD1-205ENST00000394084 ADGRL2O95490 1459 aa18.99■□□□□ 0.63
GAPVD1-205ENST00000394084 CARMIL2Q6F5E8 1435 aa18.99■□□□□ 0.63
GAPVD1-205ENST00000394084 SYNJ2O15056 1496 aa18.98■□□□□ 0.63
GAPVD1-205ENST00000394084 MAGI1Q96QZ7 1491 aaPredicted RBP18.98■□□□□ 0.63
GAPVD1-205ENST00000394084 CARD11Q9BXL7 1154 aa18.97■□□□□ 0.63
GAPVD1-205ENST00000394084 CROCC2H7BZ55 1655 aa18.96■□□□□ 0.63
GAPVD1-205ENST00000394084 ADCY10Q96PN6 1610 aa18.95■□□□□ 0.62
GAPVD1-205ENST00000394084 HNRNPMP52272 730 aaKnown RBP eCLIP18.95■□□□□ 0.62
GAPVD1-205ENST00000394084 FANCIQ9NVI1 1328 aa18.95■□□□□ 0.62
GAPVD1-205ENST00000394084 C9orf84Q5VXU9 1444 aa18.94■□□□□ 0.62
GAPVD1-205ENST00000394084 TSPY4P0CV99 314 aa18.94■□□□□ 0.62
GAPVD1-205ENST00000394084 TSPY10P0CW01 314 aa18.94■□□□□ 0.62
GAPVD1-205ENST00000394084 KDM5CP41229 1560 aa18.93■□□□□ 0.62
GAPVD1-205ENST00000394084 DCAF11Q8TEB1 546 aa18.92■□□□□ 0.62
GAPVD1-205ENST00000394084 ST20-MTHFSA0A0A6YYL1 179 aa18.91■□□□□ 0.62
GAPVD1-205ENST00000394084 ERICH6Q7L0X2 663 aa18.91■□□□□ 0.62
GAPVD1-205ENST00000394084 TMC1Q8TDI8 760 aa18.91■□□□□ 0.62
GAPVD1-205ENST00000394084 NUDCQ9Y266 331 aa18.9■□□□□ 0.62
GAPVD1-205ENST00000394084 CDC42BPAQ5VT25 1732 aa18.9■□□□□ 0.62
GAPVD1-205ENST00000394084 ATP10BO94823 1461 aa18.9■□□□□ 0.62
GAPVD1-205ENST00000394084 SMG6Q86US8 1419 aaKnown RBP18.9■□□□□ 0.62
GAPVD1-205ENST00000394084 NUP160Q12769 1436 aa18.89■□□□□ 0.61
GAPVD1-205ENST00000394084 ABCC10Q5T3U5 1492 aa18.88■□□□□ 0.61
GAPVD1-205ENST00000394084 RALGAPBQ86X10 1494 aa18.88■□□□□ 0.61
GAPVD1-205ENST00000394084 KIF15Q9NS87 1388 aa18.88■□□□□ 0.61
GAPVD1-205ENST00000394084 PNISRQ8TF01 805 aaKnown RBP18.88■□□□□ 0.61
GAPVD1-205ENST00000394084 UHRF1BP1Q6BDS2 1440 aa18.87■□□□□ 0.61
GAPVD1-205ENST00000394084 ARID4BQ4LE39 1312 aaPredicted RBP18.87■□□□□ 0.61
GAPVD1-205ENST00000394084 ABCA8O94911 1581 aa18.85■□□□□ 0.61
GAPVD1-205ENST00000394084 ROCK2O75116 1388 aaKnown RBP18.85■□□□□ 0.61
GAPVD1-205ENST00000394084 SHANK2Q9UPX8 1470 aa18.84■□□□□ 0.61
GAPVD1-205ENST00000394084 RGL3Q3MIN7 710 aa18.82■□□□□ 0.6
GAPVD1-205ENST00000394084 CCDC136Q96JN2 1154 aa18.82■□□□□ 0.6
GAPVD1-205ENST00000394084 SALL2Q9Y467 1007 aaPredicted RBP18.81■□□□□ 0.6
GAPVD1-205ENST00000394084 ARHGEF12Q9NZN5 1544 aa18.81■□□□□ 0.6
GAPVD1-205ENST00000394084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms