RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TROQ12816 1431 aaPredicted RBP28.77■■■□□ 2.2
SNRPA1-202ENST00000394082 MYO5CQ9NQX4 1742 aa28.77■■■□□ 2.2
SNRPA1-202ENST00000394082 YEATS2Q9ULM3 1422 aa28.76■■■□□ 2.19
SNRPA1-202ENST00000394082 KIF14Q15058 1648 aa28.75■■■□□ 2.19
SNRPA1-202ENST00000394082 CLIP1P30622 1438 aa28.73■■■□□ 2.19
SNRPA1-202ENST00000394082 PCF11O94913 1555 aaKnown RBP28.7■■■□□ 2.18
SNRPA1-202ENST00000394082 RIMS1Q86UR5 1692 aaKnown RBP28.69■■■□□ 2.18
SNRPA1-202ENST00000394082 LMTK3Q96Q04 1460 aa28.67■■■□□ 2.18
SNRPA1-202ENST00000394082 LRRIQ1Q96JM4 1722 aa28.67■■■□□ 2.18
SNRPA1-202ENST00000394082 SIGLEC1Q9BZZ2 1709 aa28.67■■■□□ 2.18
SNRPA1-202ENST00000394082 CASKIN1Q8WXD9 1431 aa28.67■■■□□ 2.18
SNRPA1-202ENST00000394082 ATP10AO60312 1499 aa28.66■■■□□ 2.18
SNRPA1-202ENST00000394082 CCDC18Q5T9S5 1454 aa28.66■■■□□ 2.18
SNRPA1-202ENST00000394082 ZNF518AQ6AHZ1 1483 aa28.66■■■□□ 2.18
SNRPA1-202ENST00000394082 C9orf84Q5VXU9 1444 aa28.63■■■□□ 2.17
SNRPA1-202ENST00000394082 ARHGAP5Q13017 1502 aa28.63■■■□□ 2.17
SNRPA1-202ENST00000394082 KDM5CP41229 1560 aa28.62■■■□□ 2.17
SNRPA1-202ENST00000394082 ARHGEF12Q9NZN5 1544 aa28.59■■■□□ 2.17
SNRPA1-202ENST00000394082 FER1L4A9Z1Z3 1794 aa28.56■■■□□ 2.16
SNRPA1-202ENST00000394082 CDC42BPBQ9Y5S2 1711 aa28.56■■■□□ 2.16
SNRPA1-202ENST00000394082 FYCO1Q9BQS8 1478 aa28.55■■■□□ 2.16
SNRPA1-202ENST00000394082 AFAP1Q8N556 730 aa28.54■■■□□ 2.16
SNRPA1-202ENST00000394082 PREX2Q70Z35 1606 aa28.54■■■□□ 2.16
SNRPA1-202ENST00000394082 REREQ9P2R6 1566 aa28.53■■■□□ 2.16
SNRPA1-202ENST00000394082 MLH3Q9UHC1 1453 aa28.53■■■□□ 2.16
SNRPA1-202ENST00000394082 MLECQ14165 292 aa28.51■■■□□ 2.15
SNRPA1-202ENST00000394082 ABCC1P33527 1531 aa28.48■■■□□ 2.15
SNRPA1-202ENST00000394082 FBXO41Q8TF61 875 aa28.48■■■□□ 2.15
SNRPA1-202ENST00000394082 DIP2CQ9Y2E4 1556 aa28.46■■■□□ 2.15
SNRPA1-202ENST00000394082 CDC42BPAQ5VT25 1732 aa28.43■■■□□ 2.14
SNRPA1-202ENST00000394082 AGLP35573 1532 aa28.43■■■□□ 2.14
SNRPA1-202ENST00000394082 TRAPPC8Q9Y2L5 1435 aa28.43■■■□□ 2.14
SNRPA1-202ENST00000394082 ITSN2Q9NZM3 1697 aa28.42■■■□□ 2.14
SNRPA1-202ENST00000394082 HSPA2P54652 639 aa28.41■■■□□ 2.14
SNRPA1-202ENST00000394082 ABCA6Q8N139 1617 aa28.4■■■□□ 2.14
SNRPA1-202ENST00000394082 PLPPR3Q6T4P5 718 aa28.39■■■□□ 2.14
SNRPA1-202ENST00000394082 MYT1LQ9UL68 1186 aa28.39■■■□□ 2.14
SNRPA1-202ENST00000394082 PREX1Q8TCU6 1659 aa28.37■■■□□ 2.13
SNRPA1-202ENST00000394082 GPATCH8Q9UKJ3 1502 aaKnown RBP28.35■■■□□ 2.13
SNRPA1-202ENST00000394082 KIDINS220Q9ULH0 1771 aa28.34■■■□□ 2.13
SNRPA1-202ENST00000394082 SETD1BQ9UPS6 1966 aaKnown RBP28.33■■■□□ 2.13
SNRPA1-202ENST00000394082 CEBPAP49715 358 aaPredicted RBP28.31■■■□□ 2.12
SNRPA1-202ENST00000394082 KIAA1107Q9UPP5 1409 aa28.31■■■□□ 2.12
SNRPA1-202ENST00000394082 SAMD9LQ8IVG5 1584 aa28.31■■■□□ 2.12
SNRPA1-202ENST00000394082 PLEKHH2Q8IVE3 1493 aa28.29■■■□□ 2.12
SNRPA1-202ENST00000394082 UHRF1BP1Q6BDS2 1440 aa28.26■■■□□ 2.12
SNRPA1-202ENST00000394082 CNTLNQ9NXG0 1405 aa28.26■■■□□ 2.12
SNRPA1-202ENST00000394082 SYCP2Q9BX26 1530 aa28.25■■■□□ 2.11
SNRPA1-202ENST00000394082 ESF1Q9H501 851 aaKnown RBP28.24■■■□□ 2.11
SNRPA1-202ENST00000394082 ZNF777Q9ULD5 760 aaPredicted RBP28.24■■■□□ 2.11
SNRPA1-202ENST00000394082 MTUS2Q5JR59 1369 aa28.24■■■□□ 2.11
SNRPA1-202ENST00000394082 SPAG9O60271 1321 aaKnown RBP28.23■■■□□ 2.11
SNRPA1-202ENST00000394082 C3P01024 1663 aa28.23■■■□□ 2.11
SNRPA1-202ENST00000394082 CFDP1Q9UEE9 299 aaPredicted RBP28.23■■■□□ 2.11
SNRPA1-202ENST00000394082 CCNB3Q8WWL7 1395 aa28.23■■■□□ 2.11
SNRPA1-202ENST00000394082 DMRT2Q9Y5R5 561 aa28.22■■■□□ 2.11
SNRPA1-202ENST00000394082 HNRNPMP52272 730 aaKnown RBP eCLIP28.19■■■□□ 2.1
SNRPA1-202ENST00000394082 ATP7AQ04656 1500 aa28.18■■■□□ 2.1
SNRPA1-202ENST00000394082 INO80Q9ULG1 1556 aaPredicted RBP28.16■■■□□ 2.1
SNRPA1-202ENST00000394082 CERKQ8TCT0 537 aa28.16■■■□□ 2.1
SNRPA1-202ENST00000394082 EHBP1L1Q8N3D4 1523 aa28.16■■■□□ 2.1
SNRPA1-202ENST00000394082 STRCQ7RTU9 1775 aa28.16■■■□□ 2.1
SNRPA1-202ENST00000394082 MROH2AA6NES4 1674 aa28.16■■■□□ 2.1
SNRPA1-202ENST00000394082 PLXNC1O60486 1568 aa28.15■■■□□ 2.1
SNRPA1-202ENST00000394082 NPATQ14207 1427 aa28.13■■■□□ 2.09
SNRPA1-202ENST00000394082 CEP162Q5TB80 1403 aa28.13■■■□□ 2.09
SNRPA1-202ENST00000394082 TIAM1Q13009 1591 aa28.11■■■□□ 2.09
SNRPA1-202ENST00000394082 A2MP01023 1474 aa28.11■■■□□ 2.09
SNRPA1-202ENST00000394082 PTPRTO14522 1441 aa28.09■■■□□ 2.09
SNRPA1-202ENST00000394082 PPP6R1Q9UPN7 881 aa28.08■■■□□ 2.09
SNRPA1-202ENST00000394082 ZMYM3Q14202 1370 aa28.08■■■□□ 2.09
SNRPA1-202ENST00000394082 MBD5Q9P267 1494 aa28.08■■■□□ 2.09
SNRPA1-202ENST00000394082 SUPT6HQ7KZ85 1726 aaKnown RBP28.07■■■□□ 2.08
SNRPA1-202ENST00000394082 RTEL1-TNFRSF6BF6WH68 1400 aa28.07■■■□□ 2.08
SNRPA1-202ENST00000394082 ADGBQ8N7X0 1667 aa28.05■■■□□ 2.08
SNRPA1-202ENST00000394082 ZNF644Q9H582 1327 aaPredicted RBP28.02■■■□□ 2.08
SNRPA1-202ENST00000394082 NCOA1Q15788 1441 aa28.01■■■□□ 2.07
SNRPA1-202ENST00000394082 RSPH4AQ5TD94 716 aa27.99■■■□□ 2.07
SNRPA1-202ENST00000394082 CLTCQ00610 1675 aaKnown RBP27.97■■■□□ 2.07
SNRPA1-202ENST00000394082 NCOA2Q15596 1464 aa27.96■■■□□ 2.07
SNRPA1-202ENST00000394082 DHX29Q7Z478 1369 aaKnown RBP27.95■■■□□ 2.06
SNRPA1-202ENST00000394082 PTPRKQ15262 1439 aa27.94■■■□□ 2.06
SNRPA1-202ENST00000394082 GGT6Q6P531 493 aa27.94■■■□□ 2.06
SNRPA1-202ENST00000394082 CCDC141Q6ZP82 1450 aa27.93■■■□□ 2.06
SNRPA1-202ENST00000394082 CAMSAP1Q5T5Y3 1602 aa27.92■■■□□ 2.06
SNRPA1-202ENST00000394082 ZNF142P52746 1687 aaPredicted RBP27.91■■■□□ 2.06
SNRPA1-202ENST00000394082 FAM135AQ9P2D6 1515 aa27.9■■■□□ 2.06
SNRPA1-202ENST00000394082 CAMSAP2Q08AD1 1489 aa27.89■■■□□ 2.06
SNRPA1-202ENST00000394082 PLA2R1Q13018 1463 aa27.89■■■□□ 2.06
SNRPA1-202ENST00000394082 MYO3AQ8NEV4 1616 aa27.89■■■□□ 2.05
SNRPA1-202ENST00000394082 VPS8Q8N3P4 1428 aa27.88■■■□□ 2.05
SNRPA1-202ENST00000394082 IQSEC2Q5JU85 1478 aa27.88■■■□□ 2.05
SNRPA1-202ENST00000394082 LTBP4Q8N2S1 1624 aa27.87■■■□□ 2.05
SNRPA1-202ENST00000394082 ARHGEF5Q12774 1597 aa27.86■■■□□ 2.05
SNRPA1-202ENST00000394082 CEP170BQ9Y4F5 1589 aaPredicted RBP27.86■■■□□ 2.05
SNRPA1-202ENST00000394082 PKD2Q13563 968 aa27.85■■■□□ 2.05
SNRPA1-202ENST00000394082 LRRC9Q6ZRR7 1453 aa27.84■■■□□ 2.05
SNRPA1-202ENST00000394082 MAP3K1Q13233 1512 aa27.83■■■□□ 2.05
SNRPA1-202ENST00000394082 TCOF1Q13428 1488 aaKnown RBP27.82■■■□□ 2.04
SNRPA1-202ENST00000394082 KIF3BO15066 747 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms