RNA–Protein interactions for RNA: ENST00000393572.5

FAM3A-205, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-205ENST00000393572 POGZQ7Z3K3 1410 aa28.09■■■□□ 2.09
FAM3A-205ENST00000393572 ARHGAP5Q13017 1502 aa28.08■■■□□ 2.09
FAM3A-205ENST00000393572 CEP162Q5TB80 1403 aa28.07■■■□□ 2.08
FAM3A-205ENST00000393572 ARID4BQ4LE39 1312 aaPredicted RBP28.04■■■□□ 2.08
FAM3A-205ENST00000393572 ZFYVE16Q7Z3T8 1539 aa28.03■■■□□ 2.08
FAM3A-205ENST00000393572 ZNF518AQ6AHZ1 1483 aa28.02■■■□□ 2.08
FAM3A-205ENST00000393572 PREX2Q70Z35 1606 aa27.99■■■□□ 2.07
FAM3A-205ENST00000393572 CDC42BPBQ9Y5S2 1711 aa27.98■■■□□ 2.07
FAM3A-205ENST00000393572 ADAMTSL3P82987 1691 aa27.97■■■□□ 2.07
FAM3A-205ENST00000393572 BCORL1Q5H9F3 1711 aa27.96■■■□□ 2.07
FAM3A-205ENST00000393572 MTUS2Q5JR59 1369 aa27.96■■■□□ 2.07
FAM3A-205ENST00000393572 YEATS2Q9ULM3 1422 aa27.93■■■□□ 2.06
FAM3A-205ENST00000393572 KDM5CP41229 1560 aa27.91■■■□□ 2.06
FAM3A-205ENST00000393572 ATP10AO60312 1499 aa27.91■■■□□ 2.06
FAM3A-205ENST00000393572 CDC42BPAQ5VT25 1732 aa27.9■■■□□ 2.06
FAM3A-205ENST00000393572 C9orf84Q5VXU9 1444 aa27.9■■■□□ 2.06
FAM3A-205ENST00000393572 ABCC1P33527 1531 aa27.89■■■□□ 2.06
FAM3A-205ENST00000393572 PTPRMP28827 1452 aa27.89■■■□□ 2.05
FAM3A-205ENST00000393572 AFAP1Q8N556 730 aa27.88■■■□□ 2.05
FAM3A-205ENST00000393572 CCNB3Q8WWL7 1395 aa27.87■■■□□ 2.05
FAM3A-205ENST00000393572 MYT1LQ9UL68 1186 aa27.87■■■□□ 2.05
FAM3A-205ENST00000393572 GPATCH8Q9UKJ3 1502 aaKnown RBP27.87■■■□□ 2.05
FAM3A-205ENST00000393572 EHBP1L1Q8N3D4 1523 aa27.86■■■□□ 2.05
FAM3A-205ENST00000393572 MLH3Q9UHC1 1453 aa27.85■■■□□ 2.05
FAM3A-205ENST00000393572 LOC105371045A0A1W2PR82 267 aa27.85■■■□□ 2.05
FAM3A-205ENST00000393572 HECW2Q9P2P5 1572 aa27.85■■■□□ 2.05
FAM3A-205ENST00000393572 MADDQ8WXG6 1647 aa27.84■■■□□ 2.05
FAM3A-205ENST00000393572 PLEKHH2Q8IVE3 1493 aa27.83■■■□□ 2.05
FAM3A-205ENST00000393572 CFDP1Q9UEE9 299 aaPredicted RBP27.83■■■□□ 2.05
FAM3A-205ENST00000393572 ITSN2Q9NZM3 1697 aa27.82■■■□□ 2.04
FAM3A-205ENST00000393572 ZNF777Q9ULD5 760 aaPredicted RBP27.81■■■□□ 2.04
FAM3A-205ENST00000393572 VPS8Q8N3P4 1428 aa27.8■■■□□ 2.04
FAM3A-205ENST00000393572 KIAA1107Q9UPP5 1409 aa27.8■■■□□ 2.04
FAM3A-205ENST00000393572 TRAPPC8Q9Y2L5 1435 aa27.8■■■□□ 2.04
FAM3A-205ENST00000393572 ARHGEF12Q9NZN5 1544 aa27.79■■■□□ 2.04
FAM3A-205ENST00000393572 REREQ9P2R6 1566 aa27.77■■■□□ 2.04
FAM3A-205ENST00000393572 SAMD9LQ8IVG5 1584 aa27.76■■■□□ 2.03
FAM3A-205ENST00000393572 RIMS1Q86UR5 1692 aaKnown RBP27.75■■■□□ 2.03
FAM3A-205ENST00000393572 DIP2CQ9Y2E4 1556 aa27.74■■■□□ 2.03
FAM3A-205ENST00000393572 SIGLEC1Q9BZZ2 1709 aa27.73■■■□□ 2.03
FAM3A-205ENST00000393572 MLECQ14165 292 aa27.73■■■□□ 2.03
FAM3A-205ENST00000393572 SYCP2Q9BX26 1530 aa27.72■■■□□ 2.03
FAM3A-205ENST00000393572 SPAG9O60271 1321 aaKnown RBP27.7■■■□□ 2.03
FAM3A-205ENST00000393572 TIAM1Q13009 1591 aa27.7■■■□□ 2.03
FAM3A-205ENST00000393572 SUPT6HQ7KZ85 1726 aaKnown RBP27.7■■■□□ 2.02
FAM3A-205ENST00000393572 FER1L4A9Z1Z3 1794 aa27.69■■■□□ 2.02
FAM3A-205ENST00000393572 ABCA6Q8N139 1617 aa27.69■■■□□ 2.02
FAM3A-205ENST00000393572 AGLP35573 1532 aa27.68■■■□□ 2.02
FAM3A-205ENST00000393572 HNRNPMP52272 730 aaKnown RBP eCLIP27.68■■■□□ 2.02
FAM3A-205ENST00000393572 KIDINS220Q9ULH0 1771 aa27.67■■■□□ 2.02
FAM3A-205ENST00000393572 MAP3K1Q13233 1512 aa27.67■■■□□ 2.02
FAM3A-205ENST00000393572 NCOA2Q15596 1464 aa27.65■■■□□ 2.02
FAM3A-205ENST00000393572 RSPH4AQ5TD94 716 aa27.62■■■□□ 2.01
FAM3A-205ENST00000393572 LRRC9Q6ZRR7 1453 aa27.62■■■□□ 2.01
FAM3A-205ENST00000393572 ESF1Q9H501 851 aaKnown RBP27.61■■■□□ 2.01
FAM3A-205ENST00000393572 ATP7AQ04656 1500 aa27.6■■■□□ 2.01
FAM3A-205ENST00000393572 APLP2Q06481 763 aa27.57■■■□□ 2
FAM3A-205ENST00000393572 MBD5Q9P267 1494 aa27.57■■■□□ 2
FAM3A-205ENST00000393572 INO80Q9ULG1 1556 aaPredicted RBP27.56■■■□□ 2
FAM3A-205ENST00000393572 PLPPR3Q6T4P5 718 aa27.55■■■□□ 2
FAM3A-205ENST00000393572 ZNF644Q9H582 1327 aaPredicted RBP27.55■■■□□ 2
FAM3A-205ENST00000393572 RTEL1-TNFRSF6BF6WH68 1400 aa27.55■■■□□ 2
FAM3A-205ENST00000393572 LMTK3Q96Q04 1460 aa27.55■■■□□ 2
FAM3A-205ENST00000393572 CNTLNQ9NXG0 1405 aa27.54■■■□□ 2
FAM3A-205ENST00000393572 A2MP01023 1474 aa27.51■■■□□ 2
FAM3A-205ENST00000393572 CAMSAP2Q08AD1 1489 aa27.51■■□□□ 1.99
FAM3A-205ENST00000393572 CCDC141Q6ZP82 1450 aa27.51■■□□□ 1.99
FAM3A-205ENST00000393572 SETD1BQ9UPS6 1966 aaKnown RBP27.49■■□□□ 1.99
FAM3A-205ENST00000393572 ADGBQ8N7X0 1667 aa27.48■■□□□ 1.99
FAM3A-205ENST00000393572 PLXNC1O60486 1568 aa27.48■■□□□ 1.99
FAM3A-205ENST00000393572 PPP6R1Q9UPN7 881 aa27.47■■□□□ 1.99
FAM3A-205ENST00000393572 MIA2Q96PC5 1412 aa27.45■■□□□ 1.98
FAM3A-205ENST00000393572 TSPY4P0CV99 314 aa27.45■■□□□ 1.98
FAM3A-205ENST00000393572 TSPY10P0CW01 314 aa27.45■■□□□ 1.98
FAM3A-205ENST00000393572 KANK4Q5T7N3 995 aaPredicted RBP27.45■■□□□ 1.98
FAM3A-205ENST00000393572 CEBPAP49715 358 aaPredicted RBP27.44■■□□□ 1.98
FAM3A-205ENST00000393572 ARHGEF5Q12774 1597 aa27.43■■□□□ 1.98
FAM3A-205ENST00000393572 PREX1Q8TCU6 1659 aa27.43■■□□□ 1.98
FAM3A-205ENST00000393572 MYOM3Q5VTT5 1437 aa27.41■■□□□ 1.98
FAM3A-205ENST00000393572 DHX29Q7Z478 1369 aaKnown RBP27.41■■□□□ 1.98
FAM3A-205ENST00000393572 UHRF1BP1Q6BDS2 1440 aa27.4■■□□□ 1.98
FAM3A-205ENST00000393572 C3P01024 1663 aa27.39■■□□□ 1.97
FAM3A-205ENST00000393572 MROH2AA6NES4 1674 aa27.38■■□□□ 1.97
FAM3A-205ENST00000393572 HSPA2P54652 639 aa27.36■■□□□ 1.97
FAM3A-205ENST00000393572 GGT6Q6P531 493 aa27.35■■□□□ 1.97
FAM3A-205ENST00000393572 ZMYM3Q14202 1370 aa27.34■■□□□ 1.97
FAM3A-205ENST00000393572 NPATQ14207 1427 aa27.33■■□□□ 1.97
FAM3A-205ENST00000393572 FAM135AQ9P2D6 1515 aa27.3■■□□□ 1.96
FAM3A-205ENST00000393572 MAST1Q9Y2H9 1570 aa27.29■■□□□ 1.96
FAM3A-205ENST00000393572 KIF3BO15066 747 aa27.27■■□□□ 1.96
FAM3A-205ENST00000393572 DMRT2Q9Y5R5 561 aa27.27■■□□□ 1.96
FAM3A-205ENST00000393572 CLTCQ00610 1675 aaKnown RBP27.27■■□□□ 1.96
FAM3A-205ENST00000393572 PTPN23Q9H3S7 1636 aa27.2■■□□□ 1.95
FAM3A-205ENST00000393572 SHANK2Q9UPX8 1470 aa27.19■■□□□ 1.94
FAM3A-205ENST00000393572 FGD6Q6ZV73 1430 aa27.19■■□□□ 1.94
FAM3A-205ENST00000393572 PTPRKQ15262 1439 aa27.18■■□□□ 1.94
FAM3A-205ENST00000393572 KDM5DQ9BY66 1539 aa27.18■■□□□ 1.94
FAM3A-205ENST00000393572 ILDR1Q86SU0 546 aaPredicted RBP27.18■■□□□ 1.94
FAM3A-205ENST00000393572 WASHC2CQ9Y4E1 1318 aa27.17■■□□□ 1.94
FAM3A-205ENST00000393572 TCOF1Q13428 1488 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms