RNA–Protein interactions for RNA: ENST00000393572.5

FAM3A-205, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-205ENST00000393572 NISCHQ9Y2I1 1504 aa43.04■■■■■ 4.48
FAM3A-205ENST00000393572 CCDC180Q9P1Z9 1646 aa38.48■■■■□ 3.75
FAM3A-205ENST00000393572 ABCC9O60706 1549 aa37.94■■■■□ 3.66
FAM3A-205ENST00000393572 RB1CC1Q8TDY2 1594 aa36.44■■■■□ 3.42
FAM3A-205ENST00000393572 NACADO15069 1562 aa36.32■■■■□ 3.4
FAM3A-205ENST00000393572 DCAF8L2P0C7V8 631 aa36.11■■■■□ 3.37
FAM3A-205ENST00000393572 MYO15BQ96JP2 1530 aa36.01■■■■□ 3.36
FAM3A-205ENST00000393572 ZCCHC6Q5VYS8 1495 aaKnown RBP35.75■■■■□ 3.31
FAM3A-205ENST00000393572 DCAF1Q9Y4B6 1507 aa35.67■■■■□ 3.3
FAM3A-205ENST00000393572 UNC13AQ9UPW8 1703 aa35.45■■■■□ 3.27
FAM3A-205ENST00000393572 PABPN1Q86U42 306 aaKnown RBP eCLIP35.37■■■■□ 3.25
FAM3A-205ENST00000393572 BICRAQ9NZM4 1560 aa35.21■■■■□ 3.23
FAM3A-205ENST00000393572 DNAJC5BQ9UF47 199 aa35.13■■■■□ 3.21
FAM3A-205ENST00000393572 SHROOM4Q9ULL8 1493 aa35.03■■■■□ 3.2
FAM3A-205ENST00000393572 SCRIBQ14160 1630 aa34.97■■■■□ 3.19
FAM3A-205ENST00000393572 EIF4G1Q04637 1599 aaKnown RBP34.39■■■■□ 3.1
FAM3A-205ENST00000393572 CC2D2AQ9P2K1 1620 aa34.33■■■■□ 3.09
FAM3A-205ENST00000393572 CECR2Q9BXF3 1484 aa34.2■■■■□ 3.07
FAM3A-205ENST00000393572 NCAPD3P42695 1498 aa33.49■■■□□ 2.95
FAM3A-205ENST00000393572 SMARCA4P51532 1647 aa33.46■■■□□ 2.95
FAM3A-205ENST00000393572 BAZ1AQ9NRL2 1556 aaPredicted RBP33.43■■■□□ 2.94
FAM3A-205ENST00000393572 ATAD2BQ9ULI0 1458 aa33.41■■■□□ 2.94
FAM3A-205ENST00000393572 SMARCA2P51531 1590 aa33.41■■■□□ 2.94
FAM3A-205ENST00000393572 HMGXB3Q12766 1538 aa33.29■■■□□ 2.92
FAM3A-205ENST00000393572 PEG3Q9GZU2 1588 aa33.19■■■□□ 2.9
FAM3A-205ENST00000393572 BAZ1BQ9UIG0 1483 aaKnown RBP33.13■■■□□ 2.89
FAM3A-205ENST00000393572 MROH2BQ7Z745 1585 aa33.09■■■□□ 2.89
FAM3A-205ENST00000393572 ERCC6Q03468 1493 aa32.83■■■□□ 2.85
FAM3A-205ENST00000393572 WIZO95785 1651 aa32.69■■■□□ 2.82
FAM3A-205ENST00000393572 LAMC3Q9Y6N6 1575 aa32.68■■■□□ 2.82
FAM3A-205ENST00000393572 CUX2O14529 1486 aa32.67■■■□□ 2.82
FAM3A-205ENST00000393572 NESP48681 1621 aa32.67■■■□□ 2.82
FAM3A-205ENST00000393572 RSF1Q96T23 1441 aaPredicted RBP32.6■■■□□ 2.81
FAM3A-205ENST00000393572 PDS5BQ9NTI5 1447 aa32.52■■■□□ 2.8
FAM3A-205ENST00000393572 CADPSQ9ULU8 1353 aa32.5■■■□□ 2.79
FAM3A-205ENST00000393572 TOP2AP11388 1531 aaKnown RBP32.41■■■□□ 2.78
FAM3A-205ENST00000393572 THOC2Q8NI27 1593 aaKnown RBP32.32■■■□□ 2.76
FAM3A-205ENST00000393572 KIF21AQ7Z4S6 1674 aa32.29■■■□□ 2.76
FAM3A-205ENST00000393572 CFTRP13569 1480 aa32.2■■■□□ 2.75
FAM3A-205ENST00000393572 MRC2Q9UBG0 1479 aa32.14■■■□□ 2.74
FAM3A-205ENST00000393572 DNAJC5Q9H3Z4 198 aa32.11■■■□□ 2.73
FAM3A-205ENST00000393572 CEP164Q9UPV0 1460 aa32.1■■■□□ 2.73
FAM3A-205ENST00000393572 FANCD2Q9BXW9 1451 aa32.09■■■□□ 2.73
FAM3A-205ENST00000393572 WDR62O43379 1518 aa32.03■■■□□ 2.72
FAM3A-205ENST00000393572 CCDC88BA6NC98 1476 aa32■■■□□ 2.71
FAM3A-205ENST00000393572 PRDM2Q13029 1718 aa31.9■■■□□ 2.7
FAM3A-205ENST00000393572 URB2Q14146 1524 aaKnown RBP31.73■■■□□ 2.67
FAM3A-205ENST00000393572 ABCC8Q09428 1581 aa31.62■■■□□ 2.65
FAM3A-205ENST00000393572 TOPBP1Q92547 1522 aa31.51■■■□□ 2.63
FAM3A-205ENST00000393572 IFT140Q96RY7 1462 aa31.47■■■□□ 2.63
FAM3A-205ENST00000393572 DNMBPQ6XZF7 1577 aa31.47■■■□□ 2.63
FAM3A-205ENST00000393572 SUPT5HO00267 1087 aaKnown RBP31.45■■■□□ 2.63
FAM3A-205ENST00000393572 OSCARQ8IYS5 282 aa31.25■■■□□ 2.59
FAM3A-205ENST00000393572 ZNF608Q9ULD9 1512 aaPredicted RBP31.24■■■□□ 2.59
FAM3A-205ENST00000393572 POLA1P09884 1462 aaPredicted RBP31.21■■■□□ 2.59
FAM3A-205ENST00000393572 TARBP1Q13395 1621 aaKnown RBP31.16■■■□□ 2.58
FAM3A-205ENST00000393572 EIF4G3O43432 1585 aaKnown RBP31.13■■■□□ 2.57
FAM3A-205ENST00000393572 SOGA1O94964 1423 aa31.11■■■□□ 2.57
FAM3A-205ENST00000393572 CUX1P39880 1505 aa31.08■■■□□ 2.57
FAM3A-205ENST00000393572 FGD5Q6ZNL6 1462 aa31.07■■■□□ 2.56
FAM3A-205ENST00000393572 AQRO60306 1485 aaKnown RBP eCLIP31.05■■■□□ 2.564e-7■■■□□ 18.5
FAM3A-205ENST00000393572 WDR97A6NE52 1622 aa31.05■■■□□ 2.56
FAM3A-205ENST00000393572 RAD54L2Q9Y4B4 1467 aa31.03■■■□□ 2.56
FAM3A-205ENST00000393572 TDRD9Q8NDG6 1382 aaKnown RBP30.93■■■□□ 2.54
FAM3A-205ENST00000393572 GRIN2BQ13224 1484 aa30.82■■■□□ 2.53
FAM3A-205ENST00000393572 FBLN2P98095 1184 aa30.81■■■□□ 2.52
FAM3A-205ENST00000393572 TRIM41Q8WV44 630 aa30.81■■■□□ 2.52
FAM3A-205ENST00000393572 WRNQ14191 1432 aaPredicted RBP eCLIP30.81■■■□□ 2.52
FAM3A-205ENST00000393572 ABCA10Q8WWZ4 1543 aa30.8■■■□□ 2.52
FAM3A-205ENST00000393572 MAGI1Q96QZ7 1491 aaPredicted RBP30.8■■■□□ 2.52
FAM3A-205ENST00000393572 CHD1O14646 1710 aa30.79■■■□□ 2.52
FAM3A-205ENST00000393572 SNAPC4Q5SXM2 1469 aa30.77■■■□□ 2.52
FAM3A-205ENST00000393572 TOP2BQ02880 1626 aa30.76■■■□□ 2.51
FAM3A-205ENST00000393572 GAPVD1Q14C86 1478 aa30.75■■■□□ 2.51
FAM3A-205ENST00000393572 BIVM-ERCC5R4GMW8 1640 aa30.74■■■□□ 2.51
FAM3A-205ENST00000393572 CHMP7Q8WUX9 453 aaPredicted RBP30.71■■■□□ 2.51
FAM3A-205ENST00000393572 RIMBP3CA6NJZ7 1639 aa30.67■■■□□ 2.5
FAM3A-205ENST00000393572 RIMBP3BA6NNM3 1639 aa30.67■■■□□ 2.5
FAM3A-205ENST00000393572 RIMBP3Q9UFD9 1639 aa30.67■■■□□ 2.5
FAM3A-205ENST00000393572 SYNJ2O15056 1496 aa30.66■■■□□ 2.5
FAM3A-205ENST00000393572 ARHGEF11O15085 1522 aa30.66■■■□□ 2.5
FAM3A-205ENST00000393572 ABCA5Q8WWZ7 1642 aa30.65■■■□□ 2.5
FAM3A-205ENST00000393572 SYNJ1O43426 1573 aa30.65■■■□□ 2.5
FAM3A-205ENST00000393572 PBRM1Q86U86 1689 aa30.65■■■□□ 2.5
FAM3A-205ENST00000393572 CLASP1Q7Z460 1538 aa30.5■■■□□ 2.47
FAM3A-205ENST00000393572 ERICH3Q5RHP9 1530 aa30.45■■■□□ 2.47
FAM3A-205ENST00000393572 CYB5RLQ6IPT4 315 aa30.41■■■□□ 2.46
FAM3A-205ENST00000393572 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
FAM3A-205ENST00000393572 FHAD1B1AJZ9 1412 aa30.4■■■□□ 2.46
FAM3A-205ENST00000393572 GRIN2AQ12879 1464 aa30.38■■■□□ 2.45
FAM3A-205ENST00000393572 ARAP1Q96P48 1450 aa30.36■■■□□ 2.45
FAM3A-205ENST00000393572 NUP160Q12769 1436 aa30.29■■■□□ 2.44
FAM3A-205ENST00000393572 KIF27Q86VH2 1401 aa30.23■■■□□ 2.43
FAM3A-205ENST00000393572 CEP170Q5SW79 1584 aa30.2■■■□□ 2.42
FAM3A-205ENST00000393572 IGF1RP08069 1367 aa30.11■■■□□ 2.41
FAM3A-205ENST00000393572 CUL7Q14999 1698 aa30.08■■■□□ 2.41
FAM3A-205ENST00000393572 SHROOM2Q13796 1616 aa30.07■■■□□ 2.4
FAM3A-205ENST00000393572 JPH4Q96JJ6 628 aa30■■■□□ 2.39
FAM3A-205ENST00000393572 TRHP20396 242 aaPredicted RBP29.96■■■□□ 2.39
FAM3A-205ENST00000393572 CARMIL1Q5VZK9 1371 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms