RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 POGZQ7Z3K3 1410 aa22.39■■□□□ 1.17
CCDC57-204ENST00000392345 ZMYM4Q5VZL5 1548 aa22.38■■□□□ 1.17
CCDC57-204ENST00000392345 EFCAB2Q5VUJ9 269 aa22.37■■□□□ 1.17
CCDC57-204ENST00000392345 PREX2Q70Z35 1606 aa22.35■■□□□ 1.17
CCDC57-204ENST00000392345 YEATS2Q9ULM3 1422 aa22.35■■□□□ 1.17
CCDC57-204ENST00000392345 CDC42BPBQ9Y5S2 1711 aa22.34■■□□□ 1.17
CCDC57-204ENST00000392345 ZFYVE16Q7Z3T8 1539 aa22.31■■□□□ 1.16
CCDC57-204ENST00000392345 CDC42BPAQ5VT25 1732 aa22.3■■□□□ 1.16
CCDC57-204ENST00000392345 MTUS2Q5JR59 1369 aa22.29■■□□□ 1.16
CCDC57-204ENST00000392345 ABCC1P33527 1531 aa22.29■■□□□ 1.16
CCDC57-204ENST00000392345 ARHGEF12Q9NZN5 1544 aa22.28■■□□□ 1.16
CCDC57-204ENST00000392345 SIGLEC1Q9BZZ2 1709 aa22.28■■□□□ 1.16
CCDC57-204ENST00000392345 GPATCH8Q9UKJ3 1502 aaKnown RBP22.27■■□□□ 1.16
CCDC57-204ENST00000392345 MAGI2Q86UL8 1455 aa22.27■■□□□ 1.16
CCDC57-204ENST00000392345 VPS8Q8N3P4 1428 aa22.26■■□□□ 1.15
CCDC57-204ENST00000392345 EHBP1L1Q8N3D4 1523 aa22.26■■□□□ 1.15
CCDC57-204ENST00000392345 KDM5CP41229 1560 aa22.25■■□□□ 1.15
CCDC57-204ENST00000392345 AFAP1Q8N556 730 aa22.25■■□□□ 1.15
CCDC57-204ENST00000392345 ZNF518AQ6AHZ1 1483 aa22.25■■□□□ 1.15
CCDC57-204ENST00000392345 TRAPPC8Q9Y2L5 1435 aa22.24■■□□□ 1.15
CCDC57-204ENST00000392345 ADAMTSL3P82987 1691 aa22.24■■□□□ 1.15
CCDC57-204ENST00000392345 ARID4BQ4LE39 1312 aaPredicted RBP22.24■■□□□ 1.15
CCDC57-204ENST00000392345 BCORL1Q5H9F3 1711 aa22.23■■□□□ 1.15
CCDC57-204ENST00000392345 SAMD9LQ8IVG5 1584 aa22.23■■□□□ 1.15
CCDC57-204ENST00000392345 ITSN2Q9NZM3 1697 aa22.22■■□□□ 1.15
CCDC57-204ENST00000392345 TIAM1Q13009 1591 aa22.21■■□□□ 1.15
CCDC57-204ENST00000392345 MADDQ8WXG6 1647 aa22.2■■□□□ 1.14
CCDC57-204ENST00000392345 ZNF777Q9ULD5 760 aaPredicted RBP22.19■■□□□ 1.14
CCDC57-204ENST00000392345 CCNB3Q8WWL7 1395 aa22.19■■□□□ 1.14
CCDC57-204ENST00000392345 SYCP2Q9BX26 1530 aa22.19■■□□□ 1.14
CCDC57-204ENST00000392345 HECW2Q9P2P5 1572 aa22.19■■□□□ 1.14
CCDC57-204ENST00000392345 ATP10AO60312 1499 aa22.17■■□□□ 1.14
CCDC57-204ENST00000392345 C9orf84Q5VXU9 1444 aa22.16■■□□□ 1.14
CCDC57-204ENST00000392345 ABCA6Q8N139 1617 aa22.16■■□□□ 1.14
CCDC57-204ENST00000392345 DIP2CQ9Y2E4 1556 aa22.16■■□□□ 1.14
CCDC57-204ENST00000392345 PTPRMP28827 1452 aa22.15■■□□□ 1.14
CCDC57-204ENST00000392345 CFDP1Q9UEE9 299 aaPredicted RBP22.14■■□□□ 1.13
CCDC57-204ENST00000392345 NCOA2Q15596 1464 aa22.14■■□□□ 1.13
CCDC57-204ENST00000392345 MLH3Q9UHC1 1453 aa22.14■■□□□ 1.13
CCDC57-204ENST00000392345 HNRNPMP52272 730 aaKnown RBP eCLIP22.12■■□□□ 1.13
CCDC57-204ENST00000392345 ZNF644Q9H582 1327 aaPredicted RBP22.11■■□□□ 1.13
CCDC57-204ENST00000392345 LRRC9Q6ZRR7 1453 aa22.11■■□□□ 1.13
CCDC57-204ENST00000392345 MLECQ14165 292 aa22.11■■□□□ 1.13
CCDC57-204ENST00000392345 MYT1LQ9UL68 1186 aa22.1■■□□□ 1.13
CCDC57-204ENST00000392345 RIMS1Q86UR5 1692 aaKnown RBP22.1■■□□□ 1.13
CCDC57-204ENST00000392345 SUPT6HQ7KZ85 1726 aaKnown RBP22.09■■□□□ 1.13
CCDC57-204ENST00000392345 KIAA1107Q9UPP5 1409 aa22.09■■□□□ 1.13
CCDC57-204ENST00000392345 KIDINS220Q9ULH0 1771 aa22.09■■□□□ 1.13
CCDC57-204ENST00000392345 PLEKHH2Q8IVE3 1493 aa22.08■■□□□ 1.12
CCDC57-204ENST00000392345 KANK4Q5T7N3 995 aaPredicted RBP22.07■■□□□ 1.12
CCDC57-204ENST00000392345 REREQ9P2R6 1566 aa22.07■■□□□ 1.12
CCDC57-204ENST00000392345 MAP3K1Q13233 1512 aa22.05■■□□□ 1.12
CCDC57-204ENST00000392345 MBD5Q9P267 1494 aa22.03■■□□□ 1.12
CCDC57-204ENST00000392345 INO80Q9ULG1 1556 aaPredicted RBP22.03■■□□□ 1.12
CCDC57-204ENST00000392345 SPAG9O60271 1321 aaKnown RBP22.03■■□□□ 1.12
CCDC57-204ENST00000392345 FER1L4A9Z1Z3 1794 aa22.02■■□□□ 1.11
CCDC57-204ENST00000392345 ATP7AQ04656 1500 aa22.01■■□□□ 1.11
CCDC57-204ENST00000392345 CAMSAP2Q08AD1 1489 aa22.01■■□□□ 1.11
CCDC57-204ENST00000392345 PLPPR3Q6T4P5 718 aa22■■□□□ 1.11
CCDC57-204ENST00000392345 AGLP35573 1532 aa21.99■■□□□ 1.11
CCDC57-204ENST00000392345 CCDC141Q6ZP82 1450 aa21.94■■□□□ 1.1
CCDC57-204ENST00000392345 PLXNC1O60486 1568 aa21.94■■□□□ 1.1
CCDC57-204ENST00000392345 LMTK3Q96Q04 1460 aa21.92■■□□□ 1.1
CCDC57-204ENST00000392345 A2MP01023 1474 aa21.91■■□□□ 1.1
CCDC57-204ENST00000392345 MYOM3Q5VTT5 1437 aa21.9■■□□□ 1.1
CCDC57-204ENST00000392345 CEBPAP49715 358 aaPredicted RBP21.9■■□□□ 1.1
CCDC57-204ENST00000392345 ARHGEF5Q12774 1597 aa21.88■■□□□ 1.09
CCDC57-204ENST00000392345 RTEL1-TNFRSF6BF6WH68 1400 aa21.88■■□□□ 1.09
CCDC57-204ENST00000392345 APLP2Q06481 763 aa21.87■■□□□ 1.09
CCDC57-204ENST00000392345 MIA2Q96PC5 1412 aa21.85■■□□□ 1.09
CCDC57-204ENST00000392345 ADGBQ8N7X0 1667 aa21.85■■□□□ 1.09
CCDC57-204ENST00000392345 C3P01024 1663 aa21.82■■□□□ 1.08
CCDC57-204ENST00000392345 HSPA2P54652 639 aa21.81■■□□□ 1.08
CCDC57-204ENST00000392345 DHX29Q7Z478 1369 aaKnown RBP21.79■■□□□ 1.08
CCDC57-204ENST00000392345 RSPH4AQ5TD94 716 aa21.79■■□□□ 1.08
CCDC57-204ENST00000392345 CNTLNQ9NXG0 1405 aa21.79■■□□□ 1.08
CCDC57-204ENST00000392345 PTPN23Q9H3S7 1636 aa21.78■■□□□ 1.08
CCDC57-204ENST00000392345 ESF1Q9H501 851 aaKnown RBP21.78■■□□□ 1.08
CCDC57-204ENST00000392345 GGT6Q6P531 493 aa21.77■■□□□ 1.08
CCDC57-204ENST00000392345 FGD6Q6ZV73 1430 aa21.77■■□□□ 1.08
CCDC57-204ENST00000392345 MAST1Q9Y2H9 1570 aa21.77■■□□□ 1.08
CCDC57-204ENST00000392345 PREX1Q8TCU6 1659 aa21.75■■□□□ 1.07
CCDC57-204ENST00000392345 TSPY4P0CV99 314 aa21.75■■□□□ 1.07
CCDC57-204ENST00000392345 TSPY10P0CW01 314 aa21.75■■□□□ 1.07
CCDC57-204ENST00000392345 CLTCQ00610 1675 aaKnown RBP21.75■■□□□ 1.07
CCDC57-204ENST00000392345 MROH2AA6NES4 1674 aa21.74■■□□□ 1.07
CCDC57-204ENST00000392345 ABCC5O15440 1437 aa21.73■■□□□ 1.07
CCDC57-204ENST00000392345 TCOF1Q13428 1488 aaKnown RBP21.73■■□□□ 1.07
CCDC57-204ENST00000392345 ZMYM3Q14202 1370 aa21.73■■□□□ 1.07
CCDC57-204ENST00000392345 KIF3BO15066 747 aa21.72■■□□□ 1.07
CCDC57-204ENST00000392345 UHRF1BP1Q6BDS2 1440 aa21.72■■□□□ 1.07
CCDC57-204ENST00000392345 CROCC2H7BZ55 1655 aa21.69■■□□□ 1.06
CCDC57-204ENST00000392345 DAPK1P53355 1430 aa21.69■■□□□ 1.06
CCDC57-204ENST00000392345 SHANK2Q9UPX8 1470 aa21.68■■□□□ 1.06
CCDC57-204ENST00000392345 DNMT1P26358 1616 aaKnown RBP21.68■■□□□ 1.06
CCDC57-204ENST00000392345 NPATQ14207 1427 aa21.66■■□□□ 1.06
CCDC57-204ENST00000392345 PTPRKQ15262 1439 aa21.66■■□□□ 1.06
CCDC57-204ENST00000392345 KDM5DQ9BY66 1539 aa21.65■■□□□ 1.06
CCDC57-204ENST00000392345 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.05
CCDC57-204ENST00000392345 KIF15Q9NS87 1388 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 207.8 ms