RNA–Protein interactions for RNA: ENST00000392257.7

ALS2CR12-202, Transcript of amyotrophic lateral sclerosis 2 chromosome region 12, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALS2CR12, Length 1,943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CR12-202ENST00000392257 KCTD17Q8N5Z5 321 aa7.64□□□□□ -1.19
ALS2CR12-202ENST00000392257 TMEM121BQ9BXQ6 578 aaPredicted RBP7.64□□□□□ -1.19
ALS2CR12-202ENST00000392257 RAD21O60216 631 aa7.64□□□□□ -1.19
ALS2CR12-202ENST00000392257 RGS22Q8NE09 1264 aa7.62□□□□□ -1.19
ALS2CR12-202ENST00000392257 PABPN1Q86U42 306 aaKnown RBP eCLIP7.62□□□□□ -1.19
ALS2CR12-202ENST00000392257 BCCIPQ9P287 314 aaKnown RBP eCLIP7.62□□□□□ -1.19
ALS2CR12-202ENST00000392257 HS6ST3Q8IZP7 471 aa7.61□□□□□ -1.19
ALS2CR12-202ENST00000392257 MIER1Q8N108 512 aa7.61□□□□□ -1.19
ALS2CR12-202ENST00000392257 PKNOX2Q96KN3 472 aa7.6□□□□□ -1.19
ALS2CR12-202ENST00000392257 BCL11BQ9C0K0 894 aaPredicted RBP7.59□□□□□ -1.19
ALS2CR12-202ENST00000392257 NEUROD2Q15784 382 aa7.58□□□□□ -1.2
ALS2CR12-202ENST00000392257 DIEXFQ68CQ4 756 aaKnown RBP7.58□□□□□ -1.2
ALS2CR12-202ENST00000392257 ZNF428Q96B54 188 aa7.58□□□□□ -1.2
ALS2CR12-202ENST00000392257 MTMR7Q9Y216 660 aa7.58□□□□□ -1.2
ALS2CR12-202ENST00000392257 POTEFA5A3E0 1075 aa7.57□□□□□ -1.2
ALS2CR12-202ENST00000392257 RBM25P49756 843 aaKnown RBP7.56□□□□□ -1.2
ALS2CR12-202ENST00000392257 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.56□□□□□ -1.2
ALS2CR12-202ENST00000392257 SLAIN1Q8ND83 568 aa7.56□□□□□ -1.2
ALS2CR12-202ENST00000392257 MS4A3Q96HJ5 214 aa7.56□□□□□ -1.2
ALS2CR12-202ENST00000392257 ARID3CA6NKF2 412 aa7.55□□□□□ -1.2
ALS2CR12-202ENST00000392257 ATN1P54259 1190 aaPredicted RBP7.54□□□□□ -1.2
ALS2CR12-202ENST00000392257 TRIM41Q8WV44 630 aa7.54□□□□□ -1.2
ALS2CR12-202ENST00000392257 CLSPNQ9HAW4 1339 aa7.53□□□□□ -1.2
ALS2CR12-202ENST00000392257 FGD1P98174 961 aa7.53□□□□□ -1.2
ALS2CR12-202ENST00000392257 FOXD4L5Q5VV16 416 aaPredicted RBP7.52□□□□□ -1.2
ALS2CR12-202ENST00000392257 FOXD4L4Q8WXT5 416 aaPredicted RBP7.52□□□□□ -1.2
ALS2CR12-202ENST00000392257 ZBTB47Q9UFB7 747 aaPredicted RBP7.52□□□□□ -1.2
ALS2CR12-202ENST00000392257 ANP32EQ9BTT0 268 aa7.52□□□□□ -1.21
ALS2CR12-202ENST00000392257 ZCCHC6Q5VYS8 1495 aaKnown RBP7.51□□□□□ -1.21
ALS2CR12-202ENST00000392257 APBB1O00213 710 aa7.51□□□□□ -1.21
ALS2CR12-202ENST00000392257 NKX1-1Q15270 411 aaPredicted RBP7.51□□□□□ -1.21
ALS2CR12-202ENST00000392257 RSPH4AQ5TD94 716 aa7.51□□□□□ -1.21
ALS2CR12-202ENST00000392257 FAM177A1Q8N128 213 aaPredicted RBP7.5□□□□□ -1.21
ALS2CR12-202ENST00000392257 GTPBP6O43824 516 aaPredicted RBP7.49□□□□□ -1.21
ALS2CR12-202ENST00000392257 TICAM2Q86XR7 235 aa7.49□□□□□ -1.21
ALS2CR12-202ENST00000392257 RNF25Q96BH1 459 aaPredicted RBP7.49□□□□□ -1.21
ALS2CR12-202ENST00000392257 USP35Q9P2H5 1018 aa7.49□□□□□ -1.21
ALS2CR12-202ENST00000392257 ZNF326Q5BKZ1 582 aaKnown RBP7.48□□□□□ -1.21
ALS2CR12-202ENST00000392257 LMOD2Q6P5Q4 547 aa7.48□□□□□ -1.21
ALS2CR12-202ENST00000392257 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
ALS2CR12-202ENST00000392257 KRTAP3-2Q9BYR7 98 aa7.48□□□□□ -1.21
ALS2CR12-202ENST00000392257 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.48□□□□□ -1.21
ALS2CR12-202ENST00000392257 MARVELD3Q96A59 401 aa7.47□□□□□ -1.21
ALS2CR12-202ENST00000392257 SNPHO15079 494 aa7.46□□□□□ -1.21
ALS2CR12-202ENST00000392257 SEC24BO95487 1268 aa7.46□□□□□ -1.21
ALS2CR12-202ENST00000392257 CCER1Q8TC90 406 aaPredicted RBP7.46□□□□□ -1.21
ALS2CR12-202ENST00000392257 ZNF592Q92610 1267 aa7.46□□□□□ -1.21
ALS2CR12-202ENST00000392257 BRPF3Q9ULD4 1205 aa7.46□□□□□ -1.21
ALS2CR12-202ENST00000392257 CLSTN1O94985 981 aa7.46□□□□□ -1.22
ALS2CR12-202ENST00000392257 TMCO4Q5TGY1 634 aa7.46□□□□□ -1.22
ALS2CR12-202ENST00000392257 ZFP91Q96JP5 570 aaPredicted RBP7.45□□□□□ -1.22
ALS2CR12-202ENST00000392257 E9PSI1 815 aa7.44□□□□□ -1.22
ALS2CR12-202ENST00000392257 MFAP1P55081 439 aaKnown RBP7.44□□□□□ -1.22
ALS2CR12-202ENST00000392257 PSMD1Q99460 953 aa7.44□□□□□ -1.22
ALS2CR12-202ENST00000392257 CWC22Q9HCG8 908 aaKnown RBP7.44□□□□□ -1.22
ALS2CR12-202ENST00000392257 CREBZFQ9NS37 354 aa7.44□□□□□ -1.22
ALS2CR12-202ENST00000392257 CERS3Q8IU89 383 aa7.44□□□□□ -1.22
ALS2CR12-202ENST00000392257 AEBP1Q8IUX7 1158 aa7.44□□□□□ -1.22
ALS2CR12-202ENST00000392257 P3H3Q8IVL6 736 aa7.44□□□□□ -1.22
ALS2CR12-202ENST00000392257 RNF166Q96A37 237 aaPredicted RBP7.44□□□□□ -1.22
ALS2CR12-202ENST00000392257 TRAIPQ9BWF2 469 aa7.44□□□□□ -1.22
ALS2CR12-202ENST00000392257 ZNF316A6NFI3 1004 aaPredicted RBP7.43□□□□□ -1.22
ALS2CR12-202ENST00000392257 RIOK3O14730 519 aaKnown RBP7.42□□□□□ -1.22
ALS2CR12-202ENST00000392257 STK25O00506 426 aa7.42□□□□□ -1.22
ALS2CR12-202ENST00000392257 GSE1Q14687 1217 aa7.42□□□□□ -1.22
ALS2CR12-202ENST00000392257 IRX6P78412 446 aaPredicted RBP7.41□□□□□ -1.22
ALS2CR12-202ENST00000392257 PPM1GO15355 546 aaPredicted RBP7.4□□□□□ -1.22
ALS2CR12-202ENST00000392257 CCDC136Q96JN2 1154 aa7.4□□□□□ -1.22
ALS2CR12-202ENST00000392257 CC2D2BQ6DHV5 1058 aa7.4□□□□□ -1.23
ALS2CR12-202ENST00000392257 COLQQ9Y215 455 aaPredicted RBP7.4□□□□□ -1.23
ALS2CR12-202ENST00000392257 ARID4BQ4LE39 1312 aaPredicted RBP7.39□□□□□ -1.23
ALS2CR12-202ENST00000392257 SLC24A3Q9HC58 644 aa7.39□□□□□ -1.23
ALS2CR12-202ENST00000392257 CCDC82Q8N4S0 544 aa7.39□□□□□ -1.23
ALS2CR12-202ENST00000392257 TMED8Q6PL24 325 aaPredicted RBP7.38□□□□□ -1.23
ALS2CR12-202ENST00000392257 EMP3P54852 163 aa7.37□□□□□ -1.23
ALS2CR12-202ENST00000392257 GZF1Q9H116 711 aaPredicted RBP7.37□□□□□ -1.23
ALS2CR12-202ENST00000392257 RYDENQ9NUL5 291 aaKnown RBP7.37□□□□□ -1.23
ALS2CR12-202ENST00000392257 BMP2KQ9NSY1 1161 aaPredicted RBP7.37□□□□□ -1.23
ALS2CR12-202ENST00000392257 VGFO15240 615 aaPredicted RBP7.35□□□□□ -1.23
ALS2CR12-202ENST00000392257 HS3ST6Q96QI5 342 aa7.35□□□□□ -1.23
ALS2CR12-202ENST00000392257 A0A0U1RQG5 324 aaPredicted RBP7.35□□□□□ -1.23
ALS2CR12-202ENST00000392257 YTHDC1Q96MU7 727 aaKnown RBP7.35□□□□□ -1.23
ALS2CR12-202ENST00000392257 DCAF8Q5TAQ9 597 aa7.34□□□□□ -1.23
ALS2CR12-202ENST00000392257 KCNV2Q8TDN2 545 aa7.34□□□□□ -1.23
ALS2CR12-202ENST00000392257 ZC3H15Q8WU90 426 aaKnown RBP7.34□□□□□ -1.23
ALS2CR12-202ENST00000392257 NAP1L5Q96NT1 182 aaPredicted RBP7.34□□□□□ -1.23
ALS2CR12-202ENST00000392257 SUPT16HQ9Y5B9 1047 aaKnown RBP7.34□□□□□ -1.23
ALS2CR12-202ENST00000392257 WDR70Q9NW82 654 aa7.33□□□□□ -1.24
ALS2CR12-202ENST00000392257 STK24Q9Y6E0 443 aa7.33□□□□□ -1.24
ALS2CR12-202ENST00000392257 CCDC125Q86Z20 511 aa7.32□□□□□ -1.24
ALS2CR12-202ENST00000392257 TIE1P35590 1138 aa7.31□□□□□ -1.24
ALS2CR12-202ENST00000392257 MKRN3Q13064 507 aaKnown RBP7.31□□□□□ -1.24
ALS2CR12-202ENST00000392257 PRDM16Q9HAZ2 1276 aa7.31□□□□□ -1.24
ALS2CR12-202ENST00000392257 NUBP1P53384 320 aa7.31□□□□□ -1.24
ALS2CR12-202ENST00000392257 IER5LQ5T953 404 aa7.31□□□□□ -1.24
ALS2CR12-202ENST00000392257 CCDC27Q2M243 656 aa7.3□□□□□ -1.24
ALS2CR12-202ENST00000392257 FAM205CA6NFA0 338 aa7.29□□□□□ -1.24
ALS2CR12-202ENST00000392257 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.28□□□□□ -1.24
ALS2CR12-202ENST00000392257 POTEB3A0JP26 581 aa7.28□□□□□ -1.24
ALS2CR12-202ENST00000392257 POTEBQ6S5H4 581 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms