RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 ZBTB47Q9UFB7 747 aaPredicted RBP22.08■■□□□ 1.13
SNX9-201ENST00000392185 PPM1GO15355 546 aaPredicted RBP22.08■■□□□ 1.12
SNX9-201ENST00000392185 C14orf37Q86TY3 774 aa22.08■■□□□ 1.12
SNX9-201ENST00000392185 FGD6Q6ZV73 1430 aa22.07■■□□□ 1.12
SNX9-201ENST00000392185 DNMBPQ6XZF7 1577 aa22.07■■□□□ 1.12
SNX9-201ENST00000392185 CASKIN1Q8WXD9 1431 aa22.05■■□□□ 1.12
SNX9-201ENST00000392185 STK26Q9P289 416 aa22.04■■□□□ 1.12
SNX9-201ENST00000392185 IFT140Q96RY7 1462 aa22.04■■□□□ 1.12
SNX9-201ENST00000392185 TMF1P82094 1093 aa22.03■■□□□ 1.12
SNX9-201ENST00000392185 CCDC136Q96JN2 1154 aa22.03■■□□□ 1.12
SNX9-201ENST00000392185 MYOM3Q5VTT5 1437 aa22.02■■□□□ 1.12
SNX9-201ENST00000392185 ZBTB7CA1YPR0 619 aa22.02■■□□□ 1.12
SNX9-201ENST00000392185 NUTM2DQ5VT03 806 aaPredicted RBP22.02■■□□□ 1.12
SNX9-201ENST00000392185 NEUROD2Q15784 382 aa22.01■■□□□ 1.11
SNX9-201ENST00000392185 SNAPC4Q5SXM2 1469 aa22.01■■□□□ 1.11
SNX9-201ENST00000392185 SUPT16HQ9Y5B9 1047 aaKnown RBP22■■□□□ 1.11
SNX9-201ENST00000392185 PRG4Q92954 1404 aaPredicted RBP21.98■■□□□ 1.11
SNX9-201ENST00000392185 NPM2Q86SE8 214 aaKnown RBP21.98■■□□□ 1.11
SNX9-201ENST00000392185 NCOA2Q15596 1464 aa21.98■■□□□ 1.11
SNX9-201ENST00000392185 PRDM2Q13029 1718 aa21.98■■□□□ 1.11
SNX9-201ENST00000392185 WASHC2CQ9Y4E1 1318 aa21.98■■□□□ 1.11
SNX9-201ENST00000392185 ABCA10Q8WWZ4 1543 aa21.97■■□□□ 1.11
SNX9-201ENST00000392185 ROCK2O75116 1388 aaKnown RBP21.96■■□□□ 1.11
SNX9-201ENST00000392185 LAMC3Q9Y6N6 1575 aa21.95■■□□□ 1.1
SNX9-201ENST00000392185 URB2Q14146 1524 aaKnown RBP21.93■■□□□ 1.1
SNX9-201ENST00000392185 SRPK2P78362 688 aaKnown RBP21.93■■□□□ 1.1
SNX9-201ENST00000392185 AFAP1Q8N556 730 aa21.91■■□□□ 1.1
SNX9-201ENST00000392185 CFAP53Q96M91 514 aa21.9■■□□□ 1.1
SNX9-201ENST00000392185 FYCO1Q9BQS8 1478 aa21.89■■□□□ 1.1
SNX9-201ENST00000392185 RTL5Q5HYW3 569 aaPredicted RBP21.88■■□□□ 1.09
SNX9-201ENST00000392185 ST20-MTHFSA0A0A6YYL1 179 aa21.87■■□□□ 1.09
SNX9-201ENST00000392185 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.87■■□□□ 1.09
SNX9-201ENST00000392185 LMOD2Q6P5Q4 547 aa21.86■■□□□ 1.09
SNX9-201ENST00000392185 SOX12O15370 315 aa21.85■■□□□ 1.09
SNX9-201ENST00000392185 ZNF608Q9ULD9 1512 aaPredicted RBP21.85■■□□□ 1.09
SNX9-201ENST00000392185 KIF15Q9NS87 1388 aa21.85■■□□□ 1.09
SNX9-201ENST00000392185 RRBP1Q9P2E9 1410 aaKnown RBP21.83■■□□□ 1.09
SNX9-201ENST00000392185 U2SURPO15042 1029 aaKnown RBP21.83■■□□□ 1.08
SNX9-201ENST00000392185 FAM69CQ0P6D2 419 aa21.83■■□□□ 1.08
SNX9-201ENST00000392185 CCDC144AA2RUR9 1427 aa21.82■■□□□ 1.08
SNX9-201ENST00000392185 CCER2I3L3R5 266 aa21.82■■□□□ 1.08
SNX9-201ENST00000392185 EFCAB5A4FU69 1503 aa21.81■■□□□ 1.08
SNX9-201ENST00000392185 TRAK1Q9UPV9 953 aa21.8■■□□□ 1.08
SNX9-201ENST00000392185 ANP32AP39687 249 aaKnown RBP21.78■■□□□ 1.08
SNX9-201ENST00000392185 KIAA0586Q9BVV6 1533 aa21.78■■□□□ 1.08
SNX9-201ENST00000392185 ANKRD50Q9ULJ7 1429 aa21.77■■□□□ 1.08
SNX9-201ENST00000392185 MORC1Q86VD1 984 aa21.77■■□□□ 1.08
SNX9-201ENST00000392185 SYNJ2O15056 1496 aa21.77■■□□□ 1.08
SNX9-201ENST00000392185 UACAQ9BZF9 1416 aa21.76■■□□□ 1.07
SNX9-201ENST00000392185 HDGFP51858 240 aaKnown RBP21.76■■□□□ 1.07
SNX9-201ENST00000392185 CDK13Q14004 1512 aaKnown RBP21.75■■□□□ 1.07
SNX9-201ENST00000392185 TIAM1Q13009 1591 aa21.75■■□□□ 1.07
SNX9-201ENST00000392185 LAS1LQ9Y4W2 734 aaKnown RBP21.75■■□□□ 1.07
SNX9-201ENST00000392185 A0A0G2JS52 829 aa21.74■■□□□ 1.07
SNX9-201ENST00000392185 NUDCQ9Y266 331 aa21.73■■□□□ 1.07
SNX9-201ENST00000392185 TROQ12816 1431 aaPredicted RBP21.72■■□□□ 1.07
SNX9-201ENST00000392185 MAPK8IP3Q9UPT6 1336 aa21.71■■□□□ 1.07
SNX9-201ENST00000392185 KTN1Q86UP2 1357 aaKnown RBP21.7■■□□□ 1.06
SNX9-201ENST00000392185 NUTM2FA1L443 756 aa21.69■■□□□ 1.06
SNX9-201ENST00000392185 PLB1Q6P1J6 1458 aa21.69■■□□□ 1.06
SNX9-201ENST00000392185 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
SNX9-201ENST00000392185 EPRSP07814 1512 aaKnown RBP21.67■■□□□ 1.06
SNX9-201ENST00000392185 IQGAP2Q13576 1575 aa21.67■■□□□ 1.06
SNX9-201ENST00000392185 USP47Q96K76 1375 aa21.66■■□□□ 1.06
SNX9-201ENST00000392185 ARHGAP5Q13017 1502 aa21.66■■□□□ 1.06
SNX9-201ENST00000392185 HAP1P54257 671 aaPredicted RBP21.66■■□□□ 1.06
SNX9-201ENST00000392185 FRAT1Q92837 279 aaPredicted RBP21.66■■□□□ 1.06
SNX9-201ENST00000392185 GRIN2AQ12879 1464 aa21.65■■□□□ 1.06
SNX9-201ENST00000392185 B4GALNT3Q6L9W6 998 aa21.64■■□□□ 1.05
SNX9-201ENST00000392185 PCF11O94913 1555 aaKnown RBP21.63■■□□□ 1.05
SNX9-201ENST00000392185 PANK3Q9H999 370 aa21.62■■□□□ 1.05
SNX9-201ENST00000392185 EHBP1L1Q8N3D4 1523 aa21.62■■□□□ 1.05
SNX9-201ENST00000392185 HDGFL2Q7Z4V5 671 aaPredicted RBP21.6■■□□□ 1.05
SNX9-201ENST00000392185 RALBP1Q15311 655 aa21.6■■□□□ 1.05
SNX9-201ENST00000392185 MIA2Q96PC5 1412 aa21.59■■□□□ 1.05
SNX9-201ENST00000392185 RAPGEF3O95398 923 aa21.58■■□□□ 1.05
SNX9-201ENST00000392185 PRKRIP1Q9H875 184 aaPredicted RBP21.58■■□□□ 1.05
SNX9-201ENST00000392185 U2AF1L5P0DN76 240 aaPredicted RBP21.58■■□□□ 1.04
SNX9-201ENST00000392185 U2AF1Q01081 240 aaKnown RBP eCLIP21.58■■□□□ 1.041e-8■■□□□ 13
SNX9-201ENST00000392185 CUL7Q14999 1698 aa21.57■■□□□ 1.04
SNX9-201ENST00000392185 C9orf84Q5VXU9 1444 aa21.57■■□□□ 1.04
SNX9-201ENST00000392185 SCAPERQ9BY12 1400 aa21.56■■□□□ 1.04
SNX9-201ENST00000392185 VGFO15240 615 aaPredicted RBP21.56■■□□□ 1.04
SNX9-201ENST00000392185 HECW1Q76N89 1606 aa21.56■■□□□ 1.04
SNX9-201ENST00000392185 HFM1A2PYH4 1435 aa21.56■■□□□ 1.04
SNX9-201ENST00000392185 EIF3AQ14152 1382 aaKnown RBP21.56■■□□□ 1.04
SNX9-201ENST00000392185 NLRP13Q86W25 1043 aa21.55■■□□□ 1.04
SNX9-201ENST00000392185 MYT1Q01538 1121 aa21.55■■□□□ 1.04
SNX9-201ENST00000392185 MAGI1Q96QZ7 1491 aaPredicted RBP21.55■■□□□ 1.04
SNX9-201ENST00000392185 PAK3O75914 559 aaPredicted RBP21.54■■□□□ 1.04
SNX9-201ENST00000392185 NBPF8Q3BBV2 869 aa21.54■■□□□ 1.04
SNX9-201ENST00000392185 UPF2Q9HAU5 1272 aaKnown RBP21.54■■□□□ 1.04
SNX9-201ENST00000392185 FTSJ3Q8IY81 847 aaKnown RBP21.53■■□□□ 1.04
SNX9-201ENST00000392185 PPP4R2Q9NY27 417 aa21.53■■□□□ 1.04
SNX9-201ENST00000392185 EID1Q9Y6B2 187 aa21.53■■□□□ 1.04
SNX9-201ENST00000392185 ARHGEF11O15085 1522 aa21.53■■□□□ 1.04
SNX9-201ENST00000392185 NAIPQ13075 1403 aa21.52■■□□□ 1.04
SNX9-201ENST00000392185 MINK1Q8N4C8 1332 aaPredicted RBP21.52■■□□□ 1.04
SNX9-201ENST00000392185 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.51■■□□□ 1.039e-7■■■□□ 14.6
SNX9-201ENST00000392185 CCDC146Q8IYE0 955 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms