RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 MRS2Q9HD23 443 aa17.56■□□□□ 0.4
ERCC2-204ENST00000391945 ERICH6Q7L0X2 663 aa17.55■□□□□ 0.4
ERCC2-204ENST00000391945 PLB1Q6P1J6 1458 aa17.55■□□□□ 0.4
ERCC2-204ENST00000391945 EPRSP07814 1512 aaKnown RBP17.55■□□□□ 0.4
ERCC2-204ENST00000391945 SENP3-EIF4A1A0A087X0R7 540 aa17.54■□□□□ 0.4
ERCC2-204ENST00000391945 SPAG9O60271 1321 aaKnown RBP17.53■□□□□ 0.4
ERCC2-204ENST00000391945 SALL2Q9Y467 1007 aaPredicted RBP17.53■□□□□ 0.4
ERCC2-204ENST00000391945 KIF3BO15066 747 aa17.53■□□□□ 0.4
ERCC2-204ENST00000391945 MAGI1Q96QZ7 1491 aaPredicted RBP17.53■□□□□ 0.4
ERCC2-204ENST00000391945 FKBP8Q14318 412 aa17.52■□□□□ 0.39
ERCC2-204ENST00000391945 RSPH4AQ5TD94 716 aa17.51■□□□□ 0.39
ERCC2-204ENST00000391945 TMC1Q8TDI8 760 aa17.5■□□□□ 0.39
ERCC2-204ENST00000391945 EHBP1L1Q8N3D4 1523 aa17.48■□□□□ 0.39
ERCC2-204ENST00000391945 MLECQ14165 292 aa17.48■□□□□ 0.39
ERCC2-204ENST00000391945 TROQ12816 1431 aaPredicted RBP17.48■□□□□ 0.39
ERCC2-204ENST00000391945 HECW1Q76N89 1606 aa17.47■□□□□ 0.39
ERCC2-204ENST00000391945 ARID4BQ4LE39 1312 aaPredicted RBP17.46■□□□□ 0.39
ERCC2-204ENST00000391945 UACAQ9BZF9 1416 aa17.45■□□□□ 0.38
ERCC2-204ENST00000391945 AFAP1Q8N556 730 aa17.44■□□□□ 0.38
ERCC2-204ENST00000391945 KANK1Q14678 1352 aa17.42■□□□□ 0.38
ERCC2-204ENST00000391945 KIF15Q9NS87 1388 aa17.42■□□□□ 0.38
ERCC2-204ENST00000391945 MAP3K1Q13233 1512 aa17.42■□□□□ 0.38
ERCC2-204ENST00000391945 MIA2Q96PC5 1412 aa17.4■□□□□ 0.38
ERCC2-204ENST00000391945 ANKRD50Q9ULJ7 1429 aa17.39■□□□□ 0.37
ERCC2-204ENST00000391945 SUPT6HQ7KZ85 1726 aaKnown RBP17.39■□□□□ 0.37
ERCC2-204ENST00000391945 HFM1A2PYH4 1435 aa17.39■□□□□ 0.37
ERCC2-204ENST00000391945 TRHP20396 242 aaPredicted RBP17.38■□□□□ 0.37
ERCC2-204ENST00000391945 ADAMTS12P58397 1594 aa17.37■□□□□ 0.37
ERCC2-204ENST00000391945 NAIPQ13075 1403 aa17.37■□□□□ 0.37
ERCC2-204ENST00000391945 WDR62O43379 1518 aa17.37■□□□□ 0.37
ERCC2-204ENST00000391945 ABCA5Q8WWZ7 1642 aa17.36■□□□□ 0.37
ERCC2-204ENST00000391945 EIF4G3O43432 1585 aaKnown RBP17.35■□□□□ 0.37
ERCC2-204ENST00000391945 IRX6P78412 446 aaPredicted RBP17.35■□□□□ 0.37
ERCC2-204ENST00000391945 ARHGEF11O15085 1522 aa17.35■□□□□ 0.37
ERCC2-204ENST00000391945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.34■□□□□ 0.37
ERCC2-204ENST00000391945 CTTNBP2Q8WZ74 1663 aa17.34■□□□□ 0.37
ERCC2-204ENST00000391945 THOC2Q8NI27 1593 aaKnown RBP17.34■□□□□ 0.37
ERCC2-204ENST00000391945 ARHGAP5Q13017 1502 aa17.34■□□□□ 0.37
ERCC2-204ENST00000391945 DAPK1P53355 1430 aa17.33■□□□□ 0.36
ERCC2-204ENST00000391945 ROCK2O75116 1388 aaKnown RBP17.32■□□□□ 0.36
ERCC2-204ENST00000391945 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
ERCC2-204ENST00000391945 WASHC2CQ9Y4E1 1318 aa17.31■□□□□ 0.36
ERCC2-204ENST00000391945 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
ERCC2-204ENST00000391945 CC2D1BQ5T0F9 858 aaKnown RBP17.3■□□□□ 0.36
ERCC2-204ENST00000391945 PTPRKQ15262 1439 aa17.3■□□□□ 0.36
ERCC2-204ENST00000391945 CCDC144AA2RUR9 1427 aa17.29■□□□□ 0.36
ERCC2-204ENST00000391945 C9orf84Q5VXU9 1444 aa17.29■□□□□ 0.36
ERCC2-204ENST00000391945 NUP153P49790 1475 aaKnown RBP17.29■□□□□ 0.36
ERCC2-204ENST00000391945 SAFB2Q14151 953 aaKnown RBP eCLIP17.29■□□□□ 0.36
ERCC2-204ENST00000391945 ST20-MTHFSA0A0A6YYL1 179 aa17.28■□□□□ 0.36
ERCC2-204ENST00000391945 PTPN23Q9H3S7 1636 aa17.28■□□□□ 0.36
ERCC2-204ENST00000391945 FAM69CQ0P6D2 419 aa17.27■□□□□ 0.36
ERCC2-204ENST00000391945 KNSTRNQ9Y448 316 aa17.27■□□□□ 0.36
ERCC2-204ENST00000391945 ABCC5O15440 1437 aa17.27■□□□□ 0.35
ERCC2-204ENST00000391945 TMF1P82094 1093 aa17.26■□□□□ 0.35
ERCC2-204ENST00000391945 UGGT2Q9NYU1 1516 aa17.25■□□□□ 0.35
ERCC2-204ENST00000391945 PBRM1Q86U86 1689 aa17.24■□□□□ 0.35
ERCC2-204ENST00000391945 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.354e-9■■■■■ 77.9
ERCC2-204ENST00000391945 SUPT16HQ9Y5B9 1047 aaKnown RBP17.24■□□□□ 0.35
ERCC2-204ENST00000391945 CDCA8Q53HL2 280 aa17.23■□□□□ 0.35
ERCC2-204ENST00000391945 ATP10BO94823 1461 aa17.23■□□□□ 0.35
ERCC2-204ENST00000391945 STK26Q9P289 416 aa17.23■□□□□ 0.35
ERCC2-204ENST00000391945 DISP1Q96F81 1524 aa17.23■□□□□ 0.35
ERCC2-204ENST00000391945 CAMSAP2Q08AD1 1489 aa17.22■□□□□ 0.35
ERCC2-204ENST00000391945 NBPF8Q3BBV2 869 aa17.21■□□□□ 0.35
ERCC2-204ENST00000391945 KIAA0556O60303 1618 aa17.21■□□□□ 0.35
ERCC2-204ENST00000391945 TNNT2P45379 298 aaPredicted RBP17.21■□□□□ 0.35
ERCC2-204ENST00000391945 CCER2I3L3R5 266 aa17.2■□□□□ 0.34
ERCC2-204ENST00000391945 POGKQ9P215 609 aa17.2■□□□□ 0.34
ERCC2-204ENST00000391945 RAPGEF6Q8TEU7 1601 aa17.19■□□□□ 0.34
ERCC2-204ENST00000391945 SCAPERQ9BY12 1400 aa17.19■□□□□ 0.34
ERCC2-204ENST00000391945 GPATCH8Q9UKJ3 1502 aaKnown RBP17.19■□□□□ 0.34
ERCC2-204ENST00000391945 NUP160Q12769 1436 aa17.18■□□□□ 0.34
ERCC2-204ENST00000391945 RAPGEF3O95398 923 aa17.18■□□□□ 0.34
ERCC2-204ENST00000391945 USP47Q96K76 1375 aa17.18■□□□□ 0.34
ERCC2-204ENST00000391945 WDR97A6NE52 1622 aa17.17■□□□□ 0.34
ERCC2-204ENST00000391945 ROCK1Q13464 1354 aa17.16■□□□□ 0.34
ERCC2-204ENST00000391945 NCOA1Q15788 1441 aa17.16■□□□□ 0.34
ERCC2-204ENST00000391945 NEFMP07197 916 aa17.15■□□□□ 0.34
ERCC2-204ENST00000391945 CANXP27824 592 aaKnown RBP17.15■□□□□ 0.34
ERCC2-204ENST00000391945 KIAA1107Q9UPP5 1409 aa17.13■□□□□ 0.33
ERCC2-204ENST00000391945 AKNAQ7Z591 1439 aa17.13■□□□□ 0.33
ERCC2-204ENST00000391945 TRAK1Q9UPV9 953 aa17.13■□□□□ 0.33
ERCC2-204ENST00000391945 SAMD9Q5K651 1589 aa17.13■□□□□ 0.33
ERCC2-204ENST00000391945 KIF14Q15058 1648 aa17.13■□□□□ 0.33
ERCC2-204ENST00000391945 CFAP43Q8NDM7 1665 aa17.12■□□□□ 0.33
ERCC2-204ENST00000391945 WASHC2AQ641Q2 1341 aa17.12■□□□□ 0.33
ERCC2-204ENST00000391945 PLEKHG5O94827 1062 aa17.12■□□□□ 0.33
ERCC2-204ENST00000391945 CEP170Q5SW79 1584 aa17.12■□□□□ 0.33
ERCC2-204ENST00000391945 SLC24A1O60721 1099 aa17.1■□□□□ 0.33
ERCC2-204ENST00000391945 SRPK2P78362 688 aaKnown RBP17.1■□□□□ 0.33
ERCC2-204ENST00000391945 NBPF1Q3BBV0 1214 aa17.1■□□□□ 0.33
ERCC2-204ENST00000391945 PPM1GO15355 546 aaPredicted RBP17.1■□□□□ 0.33
ERCC2-204ENST00000391945 CCDC141Q6ZP82 1450 aa17.1■□□□□ 0.33
ERCC2-204ENST00000391945 KIF7Q2M1P5 1343 aa17.09■□□□□ 0.33
ERCC2-204ENST00000391945 ANKRD30BQ9BXX2 1392 aa17.08■□□□□ 0.32
ERCC2-204ENST00000391945 PRKRIP1Q9H875 184 aaPredicted RBP17.08■□□□□ 0.32
ERCC2-204ENST00000391945 MAGI3Q5TCQ9 1506 aa17.08■□□□□ 0.32
ERCC2-204ENST00000391945 PLEKHH2Q8IVE3 1493 aa17.07■□□□□ 0.32
ERCC2-204ENST00000391945 NEUROD2Q15784 382 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms