RNA–Protein interactions for RNA: ENST00000391921.8

CD55-206, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best) BASIC

Gene CD55, Length 2,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-206ENST00000391921 AKNAQ7Z591 1439 aa26.65■■□□□ 1.86
CD55-206ENST00000391921 KIF14Q15058 1648 aa26.65■■□□□ 1.86
CD55-206ENST00000391921 DENND4BO75064 1496 aaPredicted RBP26.62■■□□□ 1.85
CD55-206ENST00000391921 GTF3C3Q9Y5Q9 886 aa26.61■■□□□ 1.85
CD55-206ENST00000391921 FOXD1Q16676 465 aa26.61■■□□□ 1.85
CD55-206ENST00000391921 DNMT1P26358 1616 aaKnown RBP26.6■■□□□ 1.85
CD55-206ENST00000391921 GPATCH8Q9UKJ3 1502 aaKnown RBP26.6■■□□□ 1.85
CD55-206ENST00000391921 PLEKHD1A6NEE1 506 aa26.59■■□□□ 1.85
CD55-206ENST00000391921 MPHOSPH9Q99550 1183 aa26.59■■□□□ 1.85
CD55-206ENST00000391921 ABCA8O94911 1581 aa26.59■■□□□ 1.85
CD55-206ENST00000391921 ATP10BO94823 1461 aa26.58■■□□□ 1.85
CD55-206ENST00000391921 CAMSAP2Q08AD1 1489 aa26.58■■□□□ 1.85
CD55-206ENST00000391921 ROCK1Q13464 1354 aa26.56■■□□□ 1.84
CD55-206ENST00000391921 DDX10Q13206 875 aaKnown RBP26.55■■□□□ 1.84
CD55-206ENST00000391921 PTPRGP23470 1445 aa26.55■■□□□ 1.84
CD55-206ENST00000391921 CHD1O14646 1710 aa26.55■■□□□ 1.84
CD55-206ENST00000391921 MYT1Q01538 1121 aa26.53■■□□□ 1.84
CD55-206ENST00000391921 ADCY10Q96PN6 1610 aa26.51■■□□□ 1.83
CD55-206ENST00000391921 ITSN2Q9NZM3 1697 aa26.5■■□□□ 1.83
CD55-206ENST00000391921 KDM5BQ9UGL1 1544 aa26.46■■□□□ 1.83
CD55-206ENST00000391921 SLC4A1APQ9BWU0 796 aaKnown RBP26.44■■□□□ 1.82
CD55-206ENST00000391921 NCOA1Q15788 1441 aa26.43■■□□□ 1.82
CD55-206ENST00000391921 ABCC10Q5T3U5 1492 aa26.42■■□□□ 1.82
CD55-206ENST00000391921 KCNH8Q96L42 1107 aa26.41■■□□□ 1.82
CD55-206ENST00000391921 CDC42BPAQ5VT25 1732 aa26.4■■□□□ 1.82
CD55-206ENST00000391921 ERCC6L2Q5T890 1561 aa26.39■■□□□ 1.81
CD55-206ENST00000391921 L3MBTL2Q969R5 705 aa26.37■■□□□ 1.81
CD55-206ENST00000391921 ANKRD30BQ9BXX2 1392 aa26.36■■□□□ 1.81
CD55-206ENST00000391921 ANKRD30AQ9BXX3 1397 aa26.34■■□□□ 1.81
CD55-206ENST00000391921 HNRNPMP52272 730 aaKnown RBP eCLIP26.34■■□□□ 1.811e-6■■■■□ 22.2
CD55-206ENST00000391921 CROCC2H7BZ55 1655 aa26.32■■□□□ 1.8
CD55-206ENST00000391921 ADGBQ8N7X0 1667 aa26.32■■□□□ 1.8
CD55-206ENST00000391921 SHROOM2Q13796 1616 aa26.32■■□□□ 1.8
CD55-206ENST00000391921 ADGRL2O95490 1459 aa26.31■■□□□ 1.8
CD55-206ENST00000391921 PZPP20742 1482 aa26.3■■□□□ 1.8
CD55-206ENST00000391921 C9orf84Q5VXU9 1444 aa26.29■■□□□ 1.8
CD55-206ENST00000391921 ANKRD50Q9ULJ7 1429 aa26.28■■□□□ 1.8
CD55-206ENST00000391921 TSPY4P0CV99 314 aa26.28■■□□□ 1.8
CD55-206ENST00000391921 TSPY10P0CW01 314 aa26.28■■□□□ 1.8
CD55-206ENST00000391921 RPRD2Q5VT52 1461 aaKnown RBP26.27■■□□□ 1.8
CD55-206ENST00000391921 HSPA5P11021 654 aaKnown RBP26.25■■□□□ 1.79
CD55-206ENST00000391921 PKD2Q13563 968 aa26.23■■□□□ 1.79
CD55-206ENST00000391921 NBPF8Q3BBV2 869 aa26.21■■□□□ 1.79
CD55-206ENST00000391921 TEX14Q8IWB6 1497 aa26.2■■□□□ 1.78
CD55-206ENST00000391921 SHANK2Q9UPX8 1470 aa26.2■■□□□ 1.78
CD55-206ENST00000391921 MBD5Q9P267 1494 aa26.2■■□□□ 1.78
CD55-206ENST00000391921 ABCC2Q92887 1545 aa26.19■■□□□ 1.78
CD55-206ENST00000391921 CDC42BPBQ9Y5S2 1711 aa26.18■■□□□ 1.78
CD55-206ENST00000391921 SAMD9LQ8IVG5 1584 aa26.18■■□□□ 1.78
CD55-206ENST00000391921 NUP155O75694 1391 aa26.18■■□□□ 1.78
CD55-206ENST00000391921 KIF15Q9NS87 1388 aa26.18■■□□□ 1.78
CD55-206ENST00000391921 ANP32CO43423 234 aa26.18■■□□□ 1.78
CD55-206ENST00000391921 EIF4G2P78344 907 aaKnown RBP eCLIP26.18■■□□□ 1.78
CD55-206ENST00000391921 TTC37Q6PGP7 1564 aa26.17■■□□□ 1.78
CD55-206ENST00000391921 KIAA1107Q9UPP5 1409 aa26.17■■□□□ 1.78
CD55-206ENST00000391921 PREX2Q70Z35 1606 aa26.16■■□□□ 1.78
CD55-206ENST00000391921 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.15■■□□□ 1.787e-8■■■□□ 15.9
CD55-206ENST00000391921 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.78
CD55-206ENST00000391921 WASHC2AQ641Q2 1341 aa26.14■■□□□ 1.78
CD55-206ENST00000391921 ARHGAP5Q13017 1502 aa26.14■■□□□ 1.77
CD55-206ENST00000391921 CCDC141Q6ZP82 1450 aa26.13■■□□□ 1.77
CD55-206ENST00000391921 ARHGEF5Q12774 1597 aa26.12■■□□□ 1.77
CD55-206ENST00000391921 SYCP2Q9BX26 1530 aa26.11■■□□□ 1.77
CD55-206ENST00000391921 ZNF326Q5BKZ1 582 aaKnown RBP26.09■■□□□ 1.77
CD55-206ENST00000391921 C11orf95C9JLR9 678 aaPredicted RBP26.06■■□□□ 1.76
CD55-206ENST00000391921 RSPH4AQ5TD94 716 aa26.04■■□□□ 1.76
CD55-206ENST00000391921 ZCCHC11Q5TAX3 1644 aaKnown RBP26.03■■□□□ 1.76
CD55-206ENST00000391921 CCER2I3L3R5 266 aa26.02■■□□□ 1.76
CD55-206ENST00000391921 MYO5CQ9NQX4 1742 aa25.99■■□□□ 1.75
CD55-206ENST00000391921 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.98■■□□□ 1.75
CD55-206ENST00000391921 KDM5DQ9BY66 1539 aa25.96■■□□□ 1.75
CD55-206ENST00000391921 ARHGEF12Q9NZN5 1544 aa25.96■■□□□ 1.75
CD55-206ENST00000391921 UHRF1BP1LA0JNW5 1464 aa25.96■■□□□ 1.75
CD55-206ENST00000391921 CCDC7Q96M83 1385 aa25.94■■□□□ 1.74
CD55-206ENST00000391921 PLCH2O75038 1416 aa25.94■■□□□ 1.74
CD55-206ENST00000391921 SPATA31E1Q6ZUB1 1445 aa25.93■■□□□ 1.74
CD55-206ENST00000391921 KDM2AQ9Y2K7 1162 aa25.93■■□□□ 1.74
CD55-206ENST00000391921 FAM135AQ9P2D6 1515 aa25.92■■□□□ 1.74
CD55-206ENST00000391921 EFCAB2Q5VUJ9 269 aa25.92■■□□□ 1.74
CD55-206ENST00000391921 PLEKHH2Q8IVE3 1493 aa25.9■■□□□ 1.74
CD55-206ENST00000391921 KIF7Q2M1P5 1343 aa25.89■■□□□ 1.73
CD55-206ENST00000391921 CNTLNQ9NXG0 1405 aa25.89■■□□□ 1.73
CD55-206ENST00000391921 MAST1Q9Y2H9 1570 aa25.87■■□□□ 1.73
CD55-206ENST00000391921 DCAF11Q8TEB1 546 aa25.87■■□□□ 1.73
CD55-206ENST00000391921 USP47Q96K76 1375 aa25.86■■□□□ 1.73
CD55-206ENST00000391921 TRAPPC8Q9Y2L5 1435 aa25.85■■□□□ 1.73
CD55-206ENST00000391921 POLR3GLQ9BT43 218 aa25.84■■□□□ 1.73
CD55-206ENST00000391921 AFAP1Q8N556 730 aa25.83■■□□□ 1.72
CD55-206ENST00000391921 SUPT16HQ9Y5B9 1047 aaKnown RBP25.82■■□□□ 1.72
CD55-206ENST00000391921 PLXNC1O60486 1568 aa25.81■■□□□ 1.72
CD55-206ENST00000391921 ABCC1P33527 1531 aa25.81■■□□□ 1.72
CD55-206ENST00000391921 RGL3Q3MIN7 710 aa25.8■■□□□ 1.72
CD55-206ENST00000391921 CARD11Q9BXL7 1154 aa25.8■■□□□ 1.72
CD55-206ENST00000391921 CCDC144AA2RUR9 1427 aa25.79■■□□□ 1.72
CD55-206ENST00000391921 UNC13BO14795 1591 aa25.78■■□□□ 1.72
CD55-206ENST00000391921 UHRF1BP1Q6BDS2 1440 aa25.78■■□□□ 1.72
CD55-206ENST00000391921 WDR7Q9Y4E6 1490 aa25.77■■□□□ 1.72
CD55-206ENST00000391921 CCDC184Q52MB2 194 aa25.77■■□□□ 1.72
CD55-206ENST00000391921 DUOX2Q9NRD8 1548 aa25.77■■□□□ 1.72
CD55-206ENST00000391921 CNGB1Q14028 1251 aaPredicted RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms