RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 PROM2Q8N271 834 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 EMID1Q96A84 441 aaPredicted RBP0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 KIF12Q96FN5 646 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 MS4A4AQ96JQ5 239 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 TMEM121BQ9BXQ6 578 aaPredicted RBP0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP4-11Q9BYQ6 195 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP4-4Q9BYR3 166 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 CREBZFQ9NS37 354 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 FAM198AQ9UFP1 575 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 HCN2Q9UL51 889 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 COLQQ9Y215 455 aaPredicted RBP0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 SSUH2Q9Y2M2 353 aa0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 MEGF11A6BM72 1044 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 TTLL13PA6NNM8 815 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP9-6A8MVA2 160 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 BHMG1C9JSJ3 638 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP4-16G5E9R7 235 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KIF3CO14782 793 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 TM4SF5O14894 197 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SIAH2O43255 324 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 WIPF1O43516 503 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 GDF9O60383 454 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ABCB7O75027 752 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP5-8O75690 187 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PPP1R37O75864 691 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ARHGEF15O94989 841 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SLC34A2O95436 690 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 THBS1P07996 1170 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 C7P10643 843 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 HOXD8P13378 290 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PRKAR2AP13861 404 aaKnown RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 HOXB1P14653 301 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 HOXB4P17483 251 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 COL9A1P20849 921 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 NUBP1P53384 320 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ATN1P54259 1190 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP10-2P60368 255 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP10-9P60411 292 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 IRX5P78411 483 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRT76Q01546 638 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP1-1Q07627 177 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 NFX1Q12986 1120 aaKnown RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 HNRNPA0Q13151 305 aaKnown RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 COL9A3Q14050 684 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 UBAP2LQ14157 1087 aaKnown RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SCARF1Q14162 830 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 POLA2Q14181 598 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ADGRE1Q14246 886 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 COL19A1Q14993 1142 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SUZ12Q15022 739 aaKnown RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP21-2Q3LI59 83 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PLA2G2CQ5R387 149 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 XP32Q5T750 250 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 LCE1FQ5T754 118 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 LCE3BQ5TA77 95 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 IFFO2Q5TF58 517 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 DMRTA1Q5VZB9 504 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 FBXO31Q5XUX0 539 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ASTLQ6HA08 431 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP5-10Q6L8G5 202 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CHADLQ6NUI6 762 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 TRAF7Q6Q0C0 670 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 NFXL1Q6ZNB6 911 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 C1orf229Q6ZS94 237 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 RASEFQ8IZ41 740 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ZNF687Q8N1G0 1237 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PIAS4Q8N2W9 510 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 GPR161Q8N6U8 529 aaKnown RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PDCD7Q8N8D1 485 aaKnown RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ZNF579Q8NAF0 562 aaKnown RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KDF1Q8NAX2 398 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 TTC13Q8NBP0 860 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CCER1Q8TC90 406 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 C7orf43Q8WVR3 580 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CNKSR2Q8WXI2 1034 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 AKT1S1Q96B36 256 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ZNF775Q96BV0 537 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 FAM163AQ96GL9 167 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 MS4A3Q96HJ5 214 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 HS3ST6Q96QI5 342 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PHF12Q96QT6 1004 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 MDFIQ99750 246 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SGIP1Q9BQI5 828 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KLF16Q9BXK1 252 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP4-3Q9BYR4 195 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP2-2Q9BYT5 123 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 TSPYL2Q9H2G4 693 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ANO8Q9HCE9 1232 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ALG13Q9NP73 1137 aaKnown RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 NPDC1Q9NQX5 325 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PLSCR2Q9NRY7 297 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 BMP2KQ9NSY1 1161 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 RNF216Q9NWF9 866 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PCDH10Q9P2E7 1040 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 DACH1Q9UI36 760 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 FARP1Q9Y4F1 1045 aaPredicted RBP0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CCDC61Q9Y6R9 512 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 FBN3Q75N90 2809 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 NBPF19A0A087WUL8 3843 aa0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 A0A0G2JS52 829 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms