RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 KIF27Q86VH2 1401 aa15.87■□□□□ 0.13
FANCA-202ENST00000389301 SETD5Q9C0A6 1442 aa15.86■□□□□ 0.13
FANCA-202ENST00000389301 CFAP44Q96MT7 982 aa15.86■□□□□ 0.13
FANCA-202ENST00000389301 KTN1Q86UP2 1357 aaKnown RBP15.85■□□□□ 0.13
FANCA-202ENST00000389301 POGKQ9P215 609 aa15.84■□□□□ 0.13
FANCA-202ENST00000389301 RWDD1Q9H446 243 aaPredicted RBP15.83■□□□□ 0.12
FANCA-202ENST00000389301 APBB1O00213 710 aa15.82■□□□□ 0.12
FANCA-202ENST00000389301 MFAP1P55081 439 aaKnown RBP15.82■□□□□ 0.12
FANCA-202ENST00000389301 MORC1Q86VD1 984 aa15.81■□□□□ 0.12
FANCA-202ENST00000389301 HSP90AA2PQ14568 343 aaPredicted RBP15.81■□□□□ 0.12
FANCA-202ENST00000389301 RSPH6AQ9H0K4 717 aa15.8■□□□□ 0.12
FANCA-202ENST00000389301 TNNT3P45378 269 aaPredicted RBP15.79■□□□□ 0.12
FANCA-202ENST00000389301 SYAP1Q96A49 352 aaPredicted RBP15.79■□□□□ 0.12
FANCA-202ENST00000389301 ITPRIPQ8IWB1 547 aa15.79■□□□□ 0.12
FANCA-202ENST00000389301 USP35Q9P2H5 1018 aa15.78■□□□□ 0.12
FANCA-202ENST00000389301 IPO8O15397 1037 aaKnown RBP15.78■□□□□ 0.12
FANCA-202ENST00000389301 RALBP1Q15311 655 aa15.77■□□□□ 0.12
FANCA-202ENST00000389301 PMFBP1Q8TBY8 1022 aa15.76■□□□□ 0.11
FANCA-202ENST00000389301 FHAD1B1AJZ9 1412 aa15.76■□□□□ 0.11
FANCA-202ENST00000389301 FOXD1Q16676 465 aa15.75■□□□□ 0.11
FANCA-202ENST00000389301 CALD1Q05682 793 aaKnown RBP15.75■□□□□ 0.11
FANCA-202ENST00000389301 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
FANCA-202ENST00000389301 KIAA1211Q6ZU35 1233 aa15.74■□□□□ 0.11
FANCA-202ENST00000389301 RAB3GAP2Q9H2M9 1393 aa15.74■□□□□ 0.11
FANCA-202ENST00000389301 GSE1Q14687 1217 aa15.74■□□□□ 0.11
FANCA-202ENST00000389301 VSIG10Q8N0Z9 540 aa15.74■□□□□ 0.11
FANCA-202ENST00000389301 SOGA1O94964 1423 aa15.74■□□□□ 0.11
FANCA-202ENST00000389301 VPS8Q8N3P4 1428 aa15.73■□□□□ 0.11
FANCA-202ENST00000389301 KANK4Q5T7N3 995 aaPredicted RBP15.72■□□□□ 0.11
FANCA-202ENST00000389301 HAP1P54257 671 aaPredicted RBP15.72■□□□□ 0.11
FANCA-202ENST00000389301 GNL2Q13823 731 aaKnown RBP15.72■□□□□ 0.11
FANCA-202ENST00000389301 SLC4A3P48751 1232 aa15.71■□□□□ 0.11
FANCA-202ENST00000389301 RB1CC1Q8TDY2 1594 aa15.71■□□□□ 0.11
FANCA-202ENST00000389301 ARHGAP35Q9NRY4 1499 aa15.7■□□□□ 0.1
FANCA-202ENST00000389301 SRPK2P78362 688 aaKnown RBP15.7■□□□□ 0.1
FANCA-202ENST00000389301 PDE4AP27815 886 aa15.7■□□□□ 0.1
FANCA-202ENST00000389301 LMOD2Q6P5Q4 547 aa15.69■□□□□ 0.1
FANCA-202ENST00000389301 PKD2Q13563 968 aa15.69■□□□□ 0.1
FANCA-202ENST00000389301 FANCIQ9NVI1 1328 aa15.68■□□□□ 0.1
FANCA-202ENST00000389301 HTATSF1O43719 755 aaKnown RBP15.68■□□□□ 0.1
FANCA-202ENST00000389301 U2AF1L5P0DN76 240 aaPredicted RBP15.68■□□□□ 0.1
FANCA-202ENST00000389301 U2AF1Q01081 240 aaKnown RBP eCLIP15.68■□□□□ 0.12e-7■■■■□ 19.8
FANCA-202ENST00000389301 DDX11L8A8MPP1 907 aa15.68■□□□□ 0.1
FANCA-202ENST00000389301 GOLGA2Q08379 1002 aa15.68■□□□□ 0.1
FANCA-202ENST00000389301 SOX12O15370 315 aa15.67■□□□□ 0.1
FANCA-202ENST00000389301 ROCK2O75116 1388 aaKnown RBP15.67■□□□□ 0.1
FANCA-202ENST00000389301 SAFB2Q14151 953 aaKnown RBP eCLIP15.66■□□□□ 0.1
FANCA-202ENST00000389301 CLUAP1Q96AJ1 413 aa15.66■□□□□ 0.1
FANCA-202ENST00000389301 PDE3BQ13370 1112 aa15.65■□□□□ 0.1
FANCA-202ENST00000389301 SMC4Q9NTJ3 1288 aa15.65■□□□□ 0.1
FANCA-202ENST00000389301 RTF1Q92541 710 aaKnown RBP15.65■□□□□ 0.1
FANCA-202ENST00000389301 TPM4P67936 248 aa15.65■□□□□ 0.1
FANCA-202ENST00000389301 NOL8Q76FK4 1167 aaKnown RBP15.65■□□□□ 0.1
FANCA-202ENST00000389301 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
FANCA-202ENST00000389301 MPHOSPH9Q99550 1183 aa15.64■□□□□ 0.09
FANCA-202ENST00000389301 FAM161AQ3B820 660 aa15.64■□□□□ 0.09
FANCA-202ENST00000389301 CCDC146Q8IYE0 955 aa15.64■□□□□ 0.09
FANCA-202ENST00000389301 CENPJQ9HC77 1338 aaPredicted RBP15.63■□□□□ 0.09
FANCA-202ENST00000389301 FOXD4L5Q5VV16 416 aaPredicted RBP15.62■□□□□ 0.09
FANCA-202ENST00000389301 GOLGA6L1Q8N7Z2 621 aa15.62■□□□□ 0.09
FANCA-202ENST00000389301 FOXD4L4Q8WXT5 416 aaPredicted RBP15.62■□□□□ 0.09
FANCA-202ENST00000389301 PHF14O94880 888 aa15.62■□□□□ 0.09
FANCA-202ENST00000389301 CSPP1Q1MSJ5 1256 aa15.62■□□□□ 0.09
FANCA-202ENST00000389301 TRIM6-TRIM34B2RNG4 842 aa15.61■□□□□ 0.09
FANCA-202ENST00000389301 CENPQQ7L2Z9 268 aaPredicted RBP15.61■□□□□ 0.09
FANCA-202ENST00000389301 NOC3LQ8WTT2 800 aaKnown RBP15.61■□□□□ 0.09
FANCA-202ENST00000389301 KANK1Q14678 1352 aa15.61■□□□□ 0.09
FANCA-202ENST00000389301 NLRP13Q86W25 1043 aa15.61■□□□□ 0.09
FANCA-202ENST00000389301 HSP90B1P14625 803 aaKnown RBP15.61■□□□□ 0.09
FANCA-202ENST00000389301 EXOC6Q8TAG9 804 aa15.61■□□□□ 0.09
FANCA-202ENST00000389301 NPHP1O15259 732 aa15.6■□□□□ 0.09
FANCA-202ENST00000389301 DDX49Q9Y6V7 483 aaKnown RBP15.59■□□□□ 0.09
FANCA-202ENST00000389301 CARMIL1Q5VZK9 1371 aa15.59■□□□□ 0.09
FANCA-202ENST00000389301 ST18O60284 1047 aa15.59■□□□□ 0.09
FANCA-202ENST00000389301 CLSTN1O94985 981 aa15.59■□□□□ 0.09
FANCA-202ENST00000389301 PLIN1O60240 522 aa15.58■□□□□ 0.08
FANCA-202ENST00000389301 L3MBTL2Q969R5 705 aa15.58■□□□□ 0.08
FANCA-202ENST00000389301 HDGFL2Q7Z4V5 671 aaPredicted RBP15.57■□□□□ 0.08
FANCA-202ENST00000389301 RRP1P56182 461 aaKnown RBP15.57■□□□□ 0.08
FANCA-202ENST00000389301 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
FANCA-202ENST00000389301 SKOR2Q2VWA4 1001 aaPredicted RBP15.57■□□□□ 0.08
FANCA-202ENST00000389301 STK26Q9P289 416 aa15.55■□□□□ 0.08
FANCA-202ENST00000389301 CRBNQ96SW2 442 aa15.55■□□□□ 0.08
FANCA-202ENST00000389301 HMMRO75330 724 aa15.55■□□□□ 0.08
FANCA-202ENST00000389301 ZBED9Q6R2W3 1325 aa15.54■□□□□ 0.08
FANCA-202ENST00000389301 FMN1Q68DA7 1419 aa15.54■□□□□ 0.08
FANCA-202ENST00000389301 CUX2O14529 1486 aa15.53■□□□□ 0.08
FANCA-202ENST00000389301 MYBBP1AQ9BQG0 1328 aaKnown RBP15.53■□□□□ 0.08
FANCA-202ENST00000389301 KIF15Q9NS87 1388 aa15.53■□□□□ 0.08
FANCA-202ENST00000389301 PHLDB1Q86UU1 1377 aa15.52■□□□□ 0.07
FANCA-202ENST00000389301 ZNF771Q7L3S4 317 aaPredicted RBP15.52■□□□□ 0.07
FANCA-202ENST00000389301 ISY1Q9ULR0 285 aaKnown RBP15.52■□□□□ 0.07
FANCA-202ENST00000389301 NUP155O75694 1391 aa15.52■□□□□ 0.07
FANCA-202ENST00000389301 FAM13BQ9NYF5 915 aa15.52■□□□□ 0.07
FANCA-202ENST00000389301 GPATCH3Q96I76 525 aa15.51■□□□□ 0.07
FANCA-202ENST00000389301 STK31Q9BXU1 1019 aa15.51■□□□□ 0.07
FANCA-202ENST00000389301 KIF16BQ96L93 1317 aa15.51■□□□□ 0.07
FANCA-202ENST00000389301 DHX57Q6P158 1386 aaKnown RBP15.51■□□□□ 0.07
FANCA-202ENST00000389301 SLC4A10Q6U841 1118 aa15.5■□□□□ 0.07
FANCA-202ENST00000389301 A0A0U1RQG5 324 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms