RNA–Protein interactions for RNA: ENST00000387416.2

MT-TS1-201, Transcript of mitochondrially encoded tRNA serine 1 (UCN), humanhuman

BASIC

Gene MT-TS1, Length 69 nt, Biotype Mt tRNA, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-TS1-201ENST00000387416 RICTORQ6R327 1708 aa13.47□□□□□ -0.25
MT-TS1-201ENST00000387416 VPS8Q8N3P4 1428 aa13.47□□□□□ -0.25
MT-TS1-201ENST00000387416 FRMPD1Q5SYB0 1578 aa13.46□□□□□ -0.25
MT-TS1-201ENST00000387416 ZMYM4Q5VZL5 1548 aa13.46□□□□□ -0.25
MT-TS1-201ENST00000387416 POGZQ7Z3K3 1410 aa13.46□□□□□ -0.26
MT-TS1-201ENST00000387416 CCNB3Q8WWL7 1395 aa13.45□□□□□ -0.26
MT-TS1-201ENST00000387416 ZNF518AQ6AHZ1 1483 aa13.44□□□□□ -0.26
MT-TS1-201ENST00000387416 PREX2Q70Z35 1606 aa13.44□□□□□ -0.26
MT-TS1-201ENST00000387416 CDC42BPBQ9Y5S2 1711 aa13.44□□□□□ -0.26
MT-TS1-201ENST00000387416 CFDP1Q9UEE9 299 aaPredicted RBP13.43□□□□□ -0.26
MT-TS1-201ENST00000387416 EHBP1L1Q8N3D4 1523 aa13.43□□□□□ -0.26
MT-TS1-201ENST00000387416 ARID4BQ4LE39 1312 aaPredicted RBP13.42□□□□□ -0.26
MT-TS1-201ENST00000387416 ZFYVE16Q7Z3T8 1539 aa13.42□□□□□ -0.26
MT-TS1-201ENST00000387416 ARHGEF40Q8TER5 1519 aa13.42□□□□□ -0.26
MT-TS1-201ENST00000387416 GPATCH8Q9UKJ3 1502 aaKnown RBP13.42□□□□□ -0.26
MT-TS1-201ENST00000387416 PLEKHH2Q8IVE3 1493 aa13.42□□□□□ -0.26
MT-TS1-201ENST00000387416 MAP3K1Q13233 1512 aa13.41□□□□□ -0.26
MT-TS1-201ENST00000387416 CDC42BPAQ5VT25 1732 aa13.41□□□□□ -0.26
MT-TS1-201ENST00000387416 KIAA1107Q9UPP5 1409 aa13.4□□□□□ -0.26
MT-TS1-201ENST00000387416 APLP2Q06481 763 aa13.4□□□□□ -0.26
MT-TS1-201ENST00000387416 AFAP1Q8N556 730 aa13.4□□□□□ -0.26
MT-TS1-201ENST00000387416 ZNF777Q9ULD5 760 aaPredicted RBP13.4□□□□□ -0.26
MT-TS1-201ENST00000387416 ATP10AO60312 1499 aa13.4□□□□□ -0.26
MT-TS1-201ENST00000387416 KDM5CP41229 1560 aa13.38□□□□□ -0.27
MT-TS1-201ENST00000387416 TIAM1Q13009 1591 aa13.38□□□□□ -0.27
MT-TS1-201ENST00000387416 MLH3Q9UHC1 1453 aa13.38□□□□□ -0.27
MT-TS1-201ENST00000387416 MYT1LQ9UL68 1186 aa13.38□□□□□ -0.27
MT-TS1-201ENST00000387416 ABCC1P33527 1531 aa13.38□□□□□ -0.27
MT-TS1-201ENST00000387416 YEATS2Q9ULM3 1422 aa13.37□□□□□ -0.27
MT-TS1-201ENST00000387416 RSPH4AQ5TD94 716 aa13.36□□□□□ -0.27
MT-TS1-201ENST00000387416 C9orf84Q5VXU9 1444 aa13.36□□□□□ -0.27
MT-TS1-201ENST00000387416 SUPT6HQ7KZ85 1726 aaKnown RBP13.36□□□□□ -0.27
MT-TS1-201ENST00000387416 ITSN2Q9NZM3 1697 aa13.35□□□□□ -0.27
MT-TS1-201ENST00000387416 TRAPPC8Q9Y2L5 1435 aa13.35□□□□□ -0.27
MT-TS1-201ENST00000387416 NCOA2Q15596 1464 aa13.35□□□□□ -0.27
MT-TS1-201ENST00000387416 LRRC9Q6ZRR7 1453 aa13.35□□□□□ -0.27
MT-TS1-201ENST00000387416 ADAMTSL3P82987 1691 aa13.34□□□□□ -0.27
MT-TS1-201ENST00000387416 ARHGEF12Q9NZN5 1544 aa13.34□□□□□ -0.27
MT-TS1-201ENST00000387416 BCORL1Q5H9F3 1711 aa13.34□□□□□ -0.27
MT-TS1-201ENST00000387416 HECW2Q9P2P5 1572 aa13.34□□□□□ -0.27
MT-TS1-201ENST00000387416 HNRNPMP52272 730 aaKnown RBP eCLIP13.34□□□□□ -0.27
MT-TS1-201ENST00000387416 SPAG9O60271 1321 aaKnown RBP13.34□□□□□ -0.27
MT-TS1-201ENST00000387416 SAMD9LQ8IVG5 1584 aa13.33□□□□□ -0.28
MT-TS1-201ENST00000387416 REREQ9P2R6 1566 aa13.31□□□□□ -0.28
MT-TS1-201ENST00000387416 SYCP2Q9BX26 1530 aa13.3□□□□□ -0.28
MT-TS1-201ENST00000387416 PTPRMP28827 1452 aa13.29□□□□□ -0.28
MT-TS1-201ENST00000387416 KANK4Q5T7N3 995 aaPredicted RBP13.29□□□□□ -0.28
MT-TS1-201ENST00000387416 AGLP35573 1532 aa13.29□□□□□ -0.28
MT-TS1-201ENST00000387416 DIP2CQ9Y2E4 1556 aa13.28□□□□□ -0.28
MT-TS1-201ENST00000387416 ZNF644Q9H582 1327 aaPredicted RBP13.28□□□□□ -0.28
MT-TS1-201ENST00000387416 RTEL1-TNFRSF6BF6WH68 1400 aa13.28□□□□□ -0.28
MT-TS1-201ENST00000387416 KIDINS220Q9ULH0 1771 aa13.27□□□□□ -0.28
MT-TS1-201ENST00000387416 MLECQ14165 292 aa13.27□□□□□ -0.29
MT-TS1-201ENST00000387416 MIA2Q96PC5 1412 aa13.27□□□□□ -0.29
MT-TS1-201ENST00000387416 MBD5Q9P267 1494 aa13.27□□□□□ -0.29
MT-TS1-201ENST00000387416 TSPY4P0CV99 314 aa13.26□□□□□ -0.29
MT-TS1-201ENST00000387416 TSPY10P0CW01 314 aa13.26□□□□□ -0.29
MT-TS1-201ENST00000387416 MADDQ8WXG6 1647 aa13.26□□□□□ -0.29
MT-TS1-201ENST00000387416 ESF1Q9H501 851 aaKnown RBP13.26□□□□□ -0.29
MT-TS1-201ENST00000387416 ABCA6Q8N139 1617 aa13.25□□□□□ -0.29
MT-TS1-201ENST00000387416 ATP7AQ04656 1500 aa13.25□□□□□ -0.29
MT-TS1-201ENST00000387416 MYOM3Q5VTT5 1437 aa13.25□□□□□ -0.29
MT-TS1-201ENST00000387416 CAMSAP2Q08AD1 1489 aa13.24□□□□□ -0.29
MT-TS1-201ENST00000387416 PPP6R1Q9UPN7 881 aa13.24□□□□□ -0.29
MT-TS1-201ENST00000387416 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
MT-TS1-201ENST00000387416 ARHGEF5Q12774 1597 aa13.23□□□□□ -0.29
MT-TS1-201ENST00000387416 INO80Q9ULG1 1556 aaPredicted RBP13.23□□□□□ -0.29
MT-TS1-201ENST00000387416 SIGLEC1Q9BZZ2 1709 aa13.22□□□□□ -0.29
MT-TS1-201ENST00000387416 RIMS1Q86UR5 1692 aaKnown RBP13.22□□□□□ -0.29
MT-TS1-201ENST00000387416 FER1L4A9Z1Z3 1794 aa13.22□□□□□ -0.29
MT-TS1-201ENST00000387416 A2MP01023 1474 aa13.22□□□□□ -0.29
MT-TS1-201ENST00000387416 CNTLNQ9NXG0 1405 aa13.22□□□□□ -0.29
MT-TS1-201ENST00000387416 SETD1BQ9UPS6 1966 aaKnown RBP13.21□□□□□ -0.29
MT-TS1-201ENST00000387416 ADGBQ8N7X0 1667 aa13.2□□□□□ -0.3
MT-TS1-201ENST00000387416 DHX29Q7Z478 1369 aaKnown RBP13.2□□□□□ -0.3
MT-TS1-201ENST00000387416 PLXNC1O60486 1568 aa13.17□□□□□ -0.3
MT-TS1-201ENST00000387416 FGD6Q6ZV73 1430 aa13.15□□□□□ -0.3
MT-TS1-201ENST00000387416 GGT6Q6P531 493 aa13.14□□□□□ -0.31
MT-TS1-201ENST00000387416 PLPPR3Q6T4P5 718 aa13.14□□□□□ -0.31
MT-TS1-201ENST00000387416 MAST1Q9Y2H9 1570 aa13.14□□□□□ -0.31
MT-TS1-201ENST00000387416 KIF3BO15066 747 aa13.13□□□□□ -0.31
MT-TS1-201ENST00000387416 CEBPAP49715 358 aaPredicted RBP13.13□□□□□ -0.31
MT-TS1-201ENST00000387416 PTPN23Q9H3S7 1636 aa13.13□□□□□ -0.31
MT-TS1-201ENST00000387416 TCOF1Q13428 1488 aaKnown RBP13.12□□□□□ -0.31
MT-TS1-201ENST00000387416 ZMYM3Q14202 1370 aa13.12□□□□□ -0.31
MT-TS1-201ENST00000387416 FAM135AQ9P2D6 1515 aa13.12□□□□□ -0.31
MT-TS1-201ENST00000387416 MROH2AA6NES4 1674 aa13.12□□□□□ -0.31
MT-TS1-201ENST00000387416 SHANK2Q9UPX8 1470 aa13.11□□□□□ -0.31
MT-TS1-201ENST00000387416 NPATQ14207 1427 aa13.11□□□□□ -0.31
MT-TS1-201ENST00000387416 LMTK3Q96Q04 1460 aa13.1□□□□□ -0.31
MT-TS1-201ENST00000387416 ABCC5O15440 1437 aa13.09□□□□□ -0.31
MT-TS1-201ENST00000387416 UHRF1BP1Q6BDS2 1440 aa13.09□□□□□ -0.31
MT-TS1-201ENST00000387416 C3P01024 1663 aa13.08□□□□□ -0.31
MT-TS1-201ENST00000387416 PREX1Q8TCU6 1659 aa13.08□□□□□ -0.31
MT-TS1-201ENST00000387416 DAPK1P53355 1430 aa13.08□□□□□ -0.32
MT-TS1-201ENST00000387416 WASHC2CQ9Y4E1 1318 aa13.08□□□□□ -0.32
MT-TS1-201ENST00000387416 DUOX2Q9NRD8 1548 aa13.08□□□□□ -0.32
MT-TS1-201ENST00000387416 ANKRD30AQ9BXX3 1397 aa13.07□□□□□ -0.32
MT-TS1-201ENST00000387416 DNMT1P26358 1616 aaKnown RBP13.07□□□□□ -0.32
MT-TS1-201ENST00000387416 FAM50AQ14320 339 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms