RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 FOXD1Q16676 465 aa24.71■■□□□ 1.55
PDX1-201ENST00000381033 CFDP1Q9UEE9 299 aaPredicted RBP24.71■■□□□ 1.55
PDX1-201ENST00000381033 ABCC5O15440 1437 aa24.7■■□□□ 1.55
PDX1-201ENST00000381033 CHD1O14646 1710 aa24.7■■□□□ 1.55
PDX1-201ENST00000381033 DAPK1P53355 1430 aa24.7■■□□□ 1.54
PDX1-201ENST00000381033 DENND4BO75064 1496 aaPredicted RBP24.69■■□□□ 1.54
PDX1-201ENST00000381033 ATP10BO94823 1461 aa24.68■■□□□ 1.54
PDX1-201ENST00000381033 GPATCH8Q9UKJ3 1502 aaKnown RBP24.66■■□□□ 1.54
PDX1-201ENST00000381033 ABCA8O94911 1581 aa24.66■■□□□ 1.54
PDX1-201ENST00000381033 GCC2Q8IWJ2 1684 aa24.65■■□□□ 1.54
PDX1-201ENST00000381033 PLEKHD1A6NEE1 506 aa24.65■■□□□ 1.54
PDX1-201ENST00000381033 TONSLQ96HA7 1378 aa24.64■■□□□ 1.54
PDX1-201ENST00000381033 PTPRGP23470 1445 aa24.64■■□□□ 1.53
PDX1-201ENST00000381033 MPHOSPH9Q99550 1183 aa24.62■■□□□ 1.53
PDX1-201ENST00000381033 DNMT1P26358 1616 aaKnown RBP24.61■■□□□ 1.53
PDX1-201ENST00000381033 TIMELESSQ9UNS1 1208 aa24.61■■□□□ 1.53
PDX1-201ENST00000381033 CAMSAP2Q08AD1 1489 aa24.61■■□□□ 1.53
PDX1-201ENST00000381033 CENPBP07199 599 aaPredicted RBP24.61■■□□□ 1.53
PDX1-201ENST00000381033 ERCC6L2Q5T890 1561 aa24.6■■□□□ 1.53
PDX1-201ENST00000381033 AKNAQ7Z591 1439 aa24.59■■□□□ 1.53
PDX1-201ENST00000381033 DDX10Q13206 875 aaKnown RBP24.55■■□□□ 1.52
PDX1-201ENST00000381033 ADCY10Q96PN6 1610 aa24.54■■□□□ 1.52
PDX1-201ENST00000381033 ROCK1Q13464 1354 aa24.53■■□□□ 1.52
PDX1-201ENST00000381033 ABCC10Q5T3U5 1492 aa24.5■■□□□ 1.51
PDX1-201ENST00000381033 GTF3C3Q9Y5Q9 886 aa24.5■■□□□ 1.51
PDX1-201ENST00000381033 ITSN2Q9NZM3 1697 aa24.5■■□□□ 1.51
PDX1-201ENST00000381033 KDM5BQ9UGL1 1544 aa24.5■■□□□ 1.51
PDX1-201ENST00000381033 CDC42BPAQ5VT25 1732 aa24.5■■□□□ 1.51
PDX1-201ENST00000381033 NCOA1Q15788 1441 aa24.48■■□□□ 1.51
PDX1-201ENST00000381033 KCNH8Q96L42 1107 aa24.48■■□□□ 1.51
PDX1-201ENST00000381033 HNRNPMP52272 730 aaKnown RBP eCLIP24.48■■□□□ 1.51
PDX1-201ENST00000381033 SLC4A1APQ9BWU0 796 aaKnown RBP24.48■■□□□ 1.51
PDX1-201ENST00000381033 SHROOM2Q13796 1616 aa24.44■■□□□ 1.5
PDX1-201ENST00000381033 L3MBTL2Q969R5 705 aa24.42■■□□□ 1.5
PDX1-201ENST00000381033 ANKRD30BQ9BXX2 1392 aa24.39■■□□□ 1.49
PDX1-201ENST00000381033 CROCC2H7BZ55 1655 aa24.36■■□□□ 1.49
PDX1-201ENST00000381033 PZPP20742 1482 aa24.36■■□□□ 1.49
PDX1-201ENST00000381033 ANKRD30AQ9BXX3 1397 aa24.35■■□□□ 1.49
PDX1-201ENST00000381033 ADGBQ8N7X0 1667 aa24.34■■□□□ 1.49
PDX1-201ENST00000381033 C9orf84Q5VXU9 1444 aa24.33■■□□□ 1.49
PDX1-201ENST00000381033 ADGRL2O95490 1459 aa24.33■■□□□ 1.49
PDX1-201ENST00000381033 ANKRD50Q9ULJ7 1429 aa24.32■■□□□ 1.48
PDX1-201ENST00000381033 TSPY4P0CV99 314 aa24.32■■□□□ 1.48
PDX1-201ENST00000381033 TSPY10P0CW01 314 aa24.32■■□□□ 1.48
PDX1-201ENST00000381033 CDC42BPBQ9Y5S2 1711 aa24.32■■□□□ 1.48
PDX1-201ENST00000381033 PKD2Q13563 968 aa24.3■■□□□ 1.48
PDX1-201ENST00000381033 NBPF8Q3BBV2 869 aa24.3■■□□□ 1.48
PDX1-201ENST00000381033 MBD5Q9P267 1494 aa24.29■■□□□ 1.48
PDX1-201ENST00000381033 TTC37Q6PGP7 1564 aa24.29■■□□□ 1.48
PDX1-201ENST00000381033 CLASP1Q7Z460 1538 aa24.29■■□□□ 1.48
PDX1-201ENST00000381033 ABCC2Q92887 1545 aa24.29■■□□□ 1.48
PDX1-201ENST00000381033 SAMD9LQ8IVG5 1584 aa24.29■■□□□ 1.48
PDX1-201ENST00000381033 HSPA5P11021 654 aaKnown RBP24.28■■□□□ 1.48
PDX1-201ENST00000381033 RPRD2Q5VT52 1461 aaKnown RBP24.28■■□□□ 1.48
PDX1-201ENST00000381033 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.27■■□□□ 1.48
PDX1-201ENST00000381033 NUP155O75694 1391 aa24.24■■□□□ 1.47
PDX1-201ENST00000381033 KIF15Q9NS87 1388 aa24.24■■□□□ 1.47
PDX1-201ENST00000381033 EIF5BO60841 1220 aaKnown RBP24.23■■□□□ 1.47
PDX1-201ENST00000381033 PREX2Q70Z35 1606 aa24.23■■□□□ 1.47
PDX1-201ENST00000381033 TEX14Q8IWB6 1497 aa24.22■■□□□ 1.47
PDX1-201ENST00000381033 ARHGAP5Q13017 1502 aa24.22■■□□□ 1.47
PDX1-201ENST00000381033 SYCP2Q9BX26 1530 aa24.2■■□□□ 1.47
PDX1-201ENST00000381033 SHANK2Q9UPX8 1470 aa24.2■■□□□ 1.46
PDX1-201ENST00000381033 KIAA1107Q9UPP5 1409 aa24.18■■□□□ 1.46
PDX1-201ENST00000381033 WASHC2AQ641Q2 1341 aa24.18■■□□□ 1.46
PDX1-201ENST00000381033 C11orf95C9JLR9 678 aaPredicted RBP24.18■■□□□ 1.46
PDX1-201ENST00000381033 CCDC141Q6ZP82 1450 aa24.17■■□□□ 1.46
PDX1-201ENST00000381033 ZNF326Q5BKZ1 582 aaKnown RBP24.17■■□□□ 1.46
PDX1-201ENST00000381033 ZCCHC11Q5TAX3 1644 aaKnown RBP24.17■■□□□ 1.46
PDX1-201ENST00000381033 EIF4G2P78344 907 aaKnown RBP eCLIP24.16■■□□□ 1.46
PDX1-201ENST00000381033 ARHGEF5Q12774 1597 aa24.16■■□□□ 1.46
PDX1-201ENST00000381033 ARHGEF12Q9NZN5 1544 aa24.13■■□□□ 1.45
PDX1-201ENST00000381033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.12■■□□□ 1.45
PDX1-201ENST00000381033 ANP32CO43423 234 aa24.11■■□□□ 1.45
PDX1-201ENST00000381033 MYO5CQ9NQX4 1742 aa24.09■■□□□ 1.45
PDX1-201ENST00000381033 RSPH4AQ5TD94 716 aa24.06■■□□□ 1.44
PDX1-201ENST00000381033 UHRF1BP1LA0JNW5 1464 aa24.06■■□□□ 1.44
PDX1-201ENST00000381033 PLCH2O75038 1416 aa24.05■■□□□ 1.44
PDX1-201ENST00000381033 KDM2AQ9Y2K7 1162 aa24.04■■□□□ 1.44
PDX1-201ENST00000381033 EFCAB2Q5VUJ9 269 aa24.02■■□□□ 1.44
PDX1-201ENST00000381033 AFAP1Q8N556 730 aa24.02■■□□□ 1.44
PDX1-201ENST00000381033 PLEKHH2Q8IVE3 1493 aa24.02■■□□□ 1.44
PDX1-201ENST00000381033 TRAPPC8Q9Y2L5 1435 aa24.01■■□□□ 1.43
PDX1-201ENST00000381033 FAM135AQ9P2D6 1515 aa24■■□□□ 1.43
PDX1-201ENST00000381033 KDM5DQ9BY66 1539 aa23.99■■□□□ 1.43
PDX1-201ENST00000381033 SPATA31E1Q6ZUB1 1445 aa23.99■■□□□ 1.43
PDX1-201ENST00000381033 DCAF11Q8TEB1 546 aa23.96■■□□□ 1.43
PDX1-201ENST00000381033 CCDC7Q96M83 1385 aa23.96■■□□□ 1.43
PDX1-201ENST00000381033 CCER2I3L3R5 266 aa23.94■■□□□ 1.42
PDX1-201ENST00000381033 RGL3Q3MIN7 710 aa23.94■■□□□ 1.42
PDX1-201ENST00000381033 KIF7Q2M1P5 1343 aa23.94■■□□□ 1.42
PDX1-201ENST00000381033 MAST1Q9Y2H9 1570 aa23.93■■□□□ 1.42
PDX1-201ENST00000381033 OSCARQ8IYS5 282 aa23.92■■□□□ 1.42
PDX1-201ENST00000381033 POLR3GLQ9BT43 218 aa23.92■■□□□ 1.42
PDX1-201ENST00000381033 ABCC1P33527 1531 aa23.91■■□□□ 1.42
PDX1-201ENST00000381033 WDR7Q9Y4E6 1490 aa23.9■■□□□ 1.42
PDX1-201ENST00000381033 CNGB1Q14028 1251 aaPredicted RBP23.9■■□□□ 1.42
PDX1-201ENST00000381033 CCDC184Q52MB2 194 aa23.9■■□□□ 1.42
PDX1-201ENST00000381033 USP47Q96K76 1375 aa23.89■■□□□ 1.42
PDX1-201ENST00000381033 PLA2R1Q13018 1463 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms