RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 RALBP1Q15311 655 aa21.69■■□□□ 1.06
SNAPC3-202ENST00000380821 IPO9Q96P70 1041 aaKnown RBP21.69■■□□□ 1.06
SNAPC3-202ENST00000380821 NACADO15069 1562 aa21.69■■□□□ 1.06
SNAPC3-202ENST00000380821 KIAA2012Q0VF49 1180 aa21.68■■□□□ 1.06
SNAPC3-202ENST00000380821 KANK1Q14678 1352 aa21.68■■□□□ 1.06
SNAPC3-202ENST00000380821 IPO8O15397 1037 aaKnown RBP21.68■■□□□ 1.06
SNAPC3-202ENST00000380821 PLEKHG5O94827 1062 aa21.68■■□□□ 1.06
SNAPC3-202ENST00000380821 RWDD1Q9H446 243 aaPredicted RBP21.68■■□□□ 1.06
SNAPC3-202ENST00000380821 NAP1L2Q9ULW6 460 aaPredicted RBP21.68■■□□□ 1.06
SNAPC3-202ENST00000380821 MORC1Q86VD1 984 aa21.67■■□□□ 1.06
SNAPC3-202ENST00000380821 PRKCSHP14314 528 aaPredicted RBP21.67■■□□□ 1.06
SNAPC3-202ENST00000380821 GOLGA6L3A6NEY3 463 aa21.65■■□□□ 1.06
SNAPC3-202ENST00000380821 SYAP1Q96A49 352 aaPredicted RBP21.65■■□□□ 1.06
SNAPC3-202ENST00000380821 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.06
SNAPC3-202ENST00000380821 ARID4BQ4LE39 1312 aaPredicted RBP21.63■■□□□ 1.05
SNAPC3-202ENST00000380821 PMFBP1Q8TBY8 1022 aa21.63■■□□□ 1.05
SNAPC3-202ENST00000380821 TAOK2Q9UL54 1235 aa21.59■■□□□ 1.05
SNAPC3-202ENST00000380821 HTATSF1O43719 755 aaKnown RBP21.58■■□□□ 1.05
SNAPC3-202ENST00000380821 CALD1Q05682 793 aaKnown RBP21.58■■□□□ 1.05
SNAPC3-202ENST00000380821 KIAA1211Q6ZU35 1233 aa21.56■■□□□ 1.04
SNAPC3-202ENST00000380821 SOGA1O94964 1423 aa21.56■■□□□ 1.04
SNAPC3-202ENST00000380821 GZF1Q9H116 711 aaPredicted RBP21.56■■□□□ 1.04
SNAPC3-202ENST00000380821 TULP1O00294 542 aaPredicted RBP21.56■■□□□ 1.04
SNAPC3-202ENST00000380821 SLKQ9H2G2 1235 aaPredicted RBP21.56■■□□□ 1.04
SNAPC3-202ENST00000380821 CARMIL1Q5VZK9 1371 aa21.55■■□□□ 1.04
SNAPC3-202ENST00000380821 EIF4G1Q04637 1599 aaKnown RBP21.55■■□□□ 1.04
SNAPC3-202ENST00000380821 RAB3GAP2Q9H2M9 1393 aa21.54■■□□□ 1.04
SNAPC3-202ENST00000380821 USP35Q9P2H5 1018 aa21.53■■□□□ 1.04
SNAPC3-202ENST00000380821 ROCK2O75116 1388 aaKnown RBP21.53■■□□□ 1.04
SNAPC3-202ENST00000380821 ITPRIPQ8IWB1 547 aa21.53■■□□□ 1.04
SNAPC3-202ENST00000380821 GOLGA2Q08379 1002 aa21.53■■□□□ 1.04
SNAPC3-202ENST00000380821 PDE3BQ13370 1112 aa21.51■■□□□ 1.03
SNAPC3-202ENST00000380821 SRPK2P78362 688 aaKnown RBP21.51■■□□□ 1.03
SNAPC3-202ENST00000380821 GNL2Q13823 731 aaKnown RBP21.51■■□□□ 1.03
SNAPC3-202ENST00000380821 RTF1Q92541 710 aaKnown RBP21.51■■□□□ 1.03
SNAPC3-202ENST00000380821 TPM4P67936 248 aa21.51■■□□□ 1.03
SNAPC3-202ENST00000380821 CSPP1Q1MSJ5 1256 aa21.5■■□□□ 1.03
SNAPC3-202ENST00000380821 VSIG10Q8N0Z9 540 aa21.49■■□□□ 1.03
SNAPC3-202ENST00000380821 CUX2O14529 1486 aa21.49■■□□□ 1.03
SNAPC3-202ENST00000380821 PODXL2Q9NZ53 605 aa21.49■■□□□ 1.03
SNAPC3-202ENST00000380821 EIF3AQ14152 1382 aaKnown RBP21.48■■□□□ 1.03
SNAPC3-202ENST00000380821 PKD2Q13563 968 aa21.48■■□□□ 1.03
SNAPC3-202ENST00000380821 MFAP1P55081 439 aaKnown RBP21.47■■□□□ 1.03
SNAPC3-202ENST00000380821 HDGFL2Q7Z4V5 671 aaPredicted RBP21.47■■□□□ 1.03
SNAPC3-202ENST00000380821 HDGFP51858 240 aaKnown RBP21.46■■□□□ 1.03
SNAPC3-202ENST00000380821 RSPH6AQ9H0K4 717 aa21.46■■□□□ 1.03
SNAPC3-202ENST00000380821 PHLDB1Q86UU1 1377 aa21.45■■□□□ 1.02
SNAPC3-202ENST00000380821 DDX11L8A8MPP1 907 aa21.44■■□□□ 1.02
SNAPC3-202ENST00000380821 MPHOSPH9Q99550 1183 aa21.44■■□□□ 1.02
SNAPC3-202ENST00000380821 FMN1Q68DA7 1419 aa21.43■■□□□ 1.02
SNAPC3-202ENST00000380821 PHF14O94880 888 aa21.43■■□□□ 1.02
SNAPC3-202ENST00000380821 LMOD2Q6P5Q4 547 aa21.42■■□□□ 1.02
SNAPC3-202ENST00000380821 NPHP1O15259 732 aa21.41■■□□□ 1.02
SNAPC3-202ENST00000380821 APBB1O00213 710 aa21.41■■□□□ 1.02
SNAPC3-202ENST00000380821 KANK4Q5T7N3 995 aaPredicted RBP21.41■■□□□ 1.02
SNAPC3-202ENST00000380821 U2AF1L5P0DN76 240 aaPredicted RBP21.4■■□□□ 1.02
SNAPC3-202ENST00000380821 U2AF1Q01081 240 aaKnown RBP eCLIP21.4■■□□□ 1.02
SNAPC3-202ENST00000380821 TNNT3P45378 269 aaPredicted RBP21.4■■□□□ 1.02
SNAPC3-202ENST00000380821 CHMP4AQ9BY43 222 aa21.38■■□□□ 1.01
SNAPC3-202ENST00000380821 A0A0U1RQG5 324 aaPredicted RBP21.38■■□□□ 1.01
SNAPC3-202ENST00000380821 CENPJQ9HC77 1338 aaPredicted RBP21.37■■□□□ 1.01
SNAPC3-202ENST00000380821 GPATCH3Q96I76 525 aa21.37■■□□□ 1.01
SNAPC3-202ENST00000380821 ARID3AQ99856 593 aa21.37■■□□□ 1.01
SNAPC3-202ENST00000380821 HMMRO75330 724 aa21.37■■□□□ 1.01
SNAPC3-202ENST00000380821 SMC4Q9NTJ3 1288 aa21.37■■□□□ 1.01
SNAPC3-202ENST00000380821 NLRP13Q86W25 1043 aa21.36■■□□□ 1.01
SNAPC3-202ENST00000380821 GOLGA6L1Q8N7Z2 621 aa21.36■■□□□ 1.01
SNAPC3-202ENST00000380821 ANKRD30AQ9BXX3 1397 aa21.36■■□□□ 1.01
SNAPC3-202ENST00000380821 KIF15Q9NS87 1388 aa21.36■■□□□ 1.01
SNAPC3-202ENST00000380821 PKNOX2Q96KN3 472 aa21.35■■□□□ 1.01
SNAPC3-202ENST00000380821 FOXD1Q16676 465 aa21.35■■□□□ 1.01
SNAPC3-202ENST00000380821 CENPQQ7L2Z9 268 aaPredicted RBP21.35■■□□□ 1.01
SNAPC3-202ENST00000380821 HSP90AA2PQ14568 343 aaPredicted RBP21.35■■□□□ 1.01
SNAPC3-202ENST00000380821 ST18O60284 1047 aa21.33■■□□□ 1.01
SNAPC3-202ENST00000380821 CCDC34Q96HJ3 373 aa21.33■■□□□ 1.01
SNAPC3-202ENST00000380821 SKOR2Q2VWA4 1001 aaPredicted RBP21.33■■□□□ 1.01
SNAPC3-202ENST00000380821 GSE1Q14687 1217 aa21.33■■□□□ 1
SNAPC3-202ENST00000380821 FAM161AQ3B820 660 aa21.32■■□□□ 1
SNAPC3-202ENST00000380821 FANCIQ9NVI1 1328 aa21.32■■□□□ 1
SNAPC3-202ENST00000380821 ABCC8Q09428 1581 aa21.32■■□□□ 1
SNAPC3-202ENST00000380821 NOC3LQ8WTT2 800 aaKnown RBP21.31■■□□□ 1
SNAPC3-202ENST00000380821 HDAC5Q9UQL6 1122 aa21.31■■□□□ 1
SNAPC3-202ENST00000380821 NUP155O75694 1391 aa21.31■■□□□ 1
SNAPC3-202ENST00000380821 MYBBP1AQ9BQG0 1328 aaKnown RBP21.31■■□□□ 1
SNAPC3-202ENST00000380821 STK31Q9BXU1 1019 aa21.3■■□□□ 1
SNAPC3-202ENST00000380821 SPAG9O60271 1321 aaKnown RBP21.29■■□□□ 1
SNAPC3-202ENST00000380821 HSP90B1P14625 803 aaKnown RBP21.29■■□□□ 1
SNAPC3-202ENST00000380821 SAFB2Q14151 953 aaKnown RBP eCLIP21.29■■□□□ 1
SNAPC3-202ENST00000380821 CECR2Q9BXF3 1484 aa21.29■■□□□ 1
SNAPC3-202ENST00000380821 PDE4AP27815 886 aa21.28■■□□□ 1
SNAPC3-202ENST00000380821 TRIM6-TRIM34B2RNG4 842 aa21.28■■□□□ 1
SNAPC3-202ENST00000380821 ERCC6Q03468 1493 aa21.27■■□□□ 1
SNAPC3-202ENST00000380821 SOX12O15370 315 aa21.27■■□□□ 1
SNAPC3-202ENST00000380821 CLSTN1O94985 981 aa21.27■■□□□ 1
SNAPC3-202ENST00000380821 CCDC88BA6NC98 1476 aa21.27■□□□□ 0.99
SNAPC3-202ENST00000380821 LMOD3Q0VAK6 560 aa21.26■□□□□ 0.99
SNAPC3-202ENST00000380821 FOXD4L1Q9NU39 408 aa21.25■□□□□ 0.99
SNAPC3-202ENST00000380821 CARMIL2Q6F5E8 1435 aa21.25■□□□□ 0.99
SNAPC3-202ENST00000380821 ZBED9Q6R2W3 1325 aa21.24■□□□□ 0.99
SNAPC3-202ENST00000380821 L3MBTL2Q969R5 705 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms