RNA–Protein interactions for RNA: ENST00000378197.4

RPP38-201, Transcript of ribonuclease P/MRP subunit p38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPP38, Length 1,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-201ENST00000378197 CDC42BPBQ9Y5S2 1711 aa36.52■■■■□ 3.44
RPP38-201ENST00000378197 ADGRL1O94910 1474 aa36.52■■■■□ 3.44
RPP38-201ENST00000378197 CDC42BPAQ5VT25 1732 aa36.49■■■■□ 3.43
RPP38-201ENST00000378197 RICTORQ6R327 1708 aa36.47■■■■□ 3.43
RPP38-201ENST00000378197 SCAPERQ9BY12 1400 aa36.46■■■■□ 3.43
RPP38-201ENST00000378197 GPATCH8Q9UKJ3 1502 aaKnown RBP36.42■■■■□ 3.42
RPP38-201ENST00000378197 MAP3K1Q13233 1512 aa36.41■■■■□ 3.42
RPP38-201ENST00000378197 CCNB3Q8WWL7 1395 aa36.4■■■■□ 3.42
RPP38-201ENST00000378197 POGZQ7Z3K3 1410 aa36.38■■■■□ 3.41
RPP38-201ENST00000378197 LRRC9Q6ZRR7 1453 aa36.37■■■■□ 3.41
RPP38-201ENST00000378197 SUPT6HQ7KZ85 1726 aaKnown RBP36.35■■■■□ 3.41
RPP38-201ENST00000378197 ZMYM4Q5VZL5 1548 aa36.34■■■■□ 3.41
RPP38-201ENST00000378197 ABCC1P33527 1531 aa36.32■■■■□ 3.41
RPP38-201ENST00000378197 NCOA2Q15596 1464 aa36.32■■■■□ 3.4
RPP38-201ENST00000378197 KANK4Q5T7N3 995 aaPredicted RBP36.3■■■■□ 3.4
RPP38-201ENST00000378197 CFDP1Q9UEE9 299 aaPredicted RBP36.3■■■■□ 3.4
RPP38-201ENST00000378197 ZNF777Q9ULD5 760 aaPredicted RBP36.3■■■■□ 3.4
RPP38-201ENST00000378197 APLP2Q06481 763 aa36.29■■■■□ 3.4
RPP38-201ENST00000378197 SAMD9LQ8IVG5 1584 aa36.28■■■■□ 3.4
RPP38-201ENST00000378197 ITSN2Q9NZM3 1697 aa36.28■■■■□ 3.4
RPP38-201ENST00000378197 ZNF518AQ6AHZ1 1483 aa36.28■■■■□ 3.4
RPP38-201ENST00000378197 ARHGEF12Q9NZN5 1544 aa36.27■■■■□ 3.4
RPP38-201ENST00000378197 ARHGEF40Q8TER5 1519 aa36.27■■■■□ 3.4
RPP38-201ENST00000378197 MAGI2Q86UL8 1455 aa36.24■■■■□ 3.39
RPP38-201ENST00000378197 KDM4FA0A1W2PPD8 638 aa36.24■■■■□ 3.39
RPP38-201ENST00000378197 AFAP1Q8N556 730 aa36.24■■■■□ 3.39
RPP38-201ENST00000378197 ZFYVE16Q7Z3T8 1539 aa36.23■■■■□ 3.39
RPP38-201ENST00000378197 KDM5CP41229 1560 aa36.22■■■■□ 3.39
RPP38-201ENST00000378197 YEATS2Q9ULM3 1422 aa36.21■■■■□ 3.39
RPP38-201ENST00000378197 TRAPPC8Q9Y2L5 1435 aa36.21■■■■□ 3.39
RPP38-201ENST00000378197 SYCP2Q9BX26 1530 aa36.19■■■■□ 3.38
RPP38-201ENST00000378197 AEBP2Q6ZN18 517 aaPredicted RBP36.18■■■■□ 3.38
RPP38-201ENST00000378197 PLEKHH2Q8IVE3 1493 aa36.16■■■■□ 3.38
RPP38-201ENST00000378197 KIAA1107Q9UPP5 1409 aa36.15■■■■□ 3.38
RPP38-201ENST00000378197 HNRNPMP52272 730 aaKnown RBP eCLIP36.13■■■■□ 3.37
RPP38-201ENST00000378197 HECW2Q9P2P5 1572 aa36.13■■■■□ 3.37
RPP38-201ENST00000378197 ZNF644Q9H582 1327 aaPredicted RBP36.12■■■■□ 3.37
RPP38-201ENST00000378197 MLH3Q9UHC1 1453 aa36.09■■■■□ 3.37
RPP38-201ENST00000378197 MYT1LQ9UL68 1186 aa36.09■■■■□ 3.37
RPP38-201ENST00000378197 ARID4BQ4LE39 1312 aaPredicted RBP36.06■■■■□ 3.36
RPP38-201ENST00000378197 ATP10AO60312 1499 aa36.04■■■■□ 3.36
RPP38-201ENST00000378197 CAMSAP2Q08AD1 1489 aa36.04■■■■□ 3.36
RPP38-201ENST00000378197 SIGLEC1Q9BZZ2 1709 aa36.02■■■■□ 3.36
RPP38-201ENST00000378197 MYOM3Q5VTT5 1437 aa36.02■■■■□ 3.36
RPP38-201ENST00000378197 DIP2CQ9Y2E4 1556 aa36.02■■■■□ 3.36
RPP38-201ENST00000378197 MBD5Q9P267 1494 aa36.02■■■■□ 3.36
RPP38-201ENST00000378197 C9orf84Q5VXU9 1444 aa36.01■■■■□ 3.36
RPP38-201ENST00000378197 KIDINS220Q9ULH0 1771 aa36■■■■□ 3.35
RPP38-201ENST00000378197 ABCA6Q8N139 1617 aa36■■■■□ 3.35
RPP38-201ENST00000378197 SPAG9O60271 1321 aaKnown RBP35.98■■■■□ 3.35
RPP38-201ENST00000378197 BCORL1Q5H9F3 1711 aa35.98■■■■□ 3.35
RPP38-201ENST00000378197 MIA2Q96PC5 1412 aa35.96■■■■□ 3.35
RPP38-201ENST00000378197 ADAMTSL3P82987 1691 aa35.93■■■■□ 3.34
RPP38-201ENST00000378197 INO80Q9ULG1 1556 aaPredicted RBP35.93■■■■□ 3.34
RPP38-201ENST00000378197 ATP7AQ04656 1500 aa35.93■■■■□ 3.34
RPP38-201ENST00000378197 REREQ9P2R6 1566 aa35.9■■■■□ 3.34
RPP38-201ENST00000378197 CCDC141Q6ZP82 1450 aa35.9■■■■□ 3.34
RPP38-201ENST00000378197 ARHGEF5Q12774 1597 aa35.86■■■■□ 3.33
RPP38-201ENST00000378197 RSPH4AQ5TD94 716 aa35.86■■■■□ 3.33
RPP38-201ENST00000378197 MADDQ8WXG6 1647 aa35.84■■■■□ 3.33
RPP38-201ENST00000378197 MLECQ14165 292 aa35.83■■■■□ 3.33
RPP38-201ENST00000378197 RTEL1-TNFRSF6BF6WH68 1400 aa35.81■■■■□ 3.32
RPP38-201ENST00000378197 FGD6Q6ZV73 1430 aa35.81■■■■□ 3.32
RPP38-201ENST00000378197 PTPN23Q9H3S7 1636 aa35.8■■■■□ 3.32
RPP38-201ENST00000378197 AGLP35573 1532 aa35.79■■■■□ 3.32
RPP38-201ENST00000378197 PTPRMP28827 1452 aa35.75■■■■□ 3.31
RPP38-201ENST00000378197 A2MP01023 1474 aa35.74■■■■□ 3.31
RPP38-201ENST00000378197 RIMS1Q86UR5 1692 aaKnown RBP35.74■■■■□ 3.31
RPP38-201ENST00000378197 TSPY4P0CV99 314 aa35.73■■■■□ 3.31
RPP38-201ENST00000378197 TSPY10P0CW01 314 aa35.73■■■■□ 3.31
RPP38-201ENST00000378197 TCOF1Q13428 1488 aaKnown RBP35.73■■■■□ 3.31
RPP38-201ENST00000378197 ADGBQ8N7X0 1667 aa35.73■■■■□ 3.31
RPP38-201ENST00000378197 PLXNC1O60486 1568 aa35.71■■■■□ 3.31
RPP38-201ENST00000378197 FER1L4A9Z1Z3 1794 aa35.7■■■■□ 3.31
RPP38-201ENST00000378197 PPARGC1BQ86YN6 1023 aaKnown RBP35.7■■■■□ 3.31
RPP38-201ENST00000378197 MAST1Q9Y2H9 1570 aa35.67■■■■□ 3.3
RPP38-201ENST00000378197 ABCC5O15440 1437 aa35.62■■■■□ 3.29
RPP38-201ENST00000378197 DHX29Q7Z478 1369 aaKnown RBP35.62■■■■□ 3.29
RPP38-201ENST00000378197 DNMT1P26358 1616 aaKnown RBP35.61■■■■□ 3.29
RPP38-201ENST00000378197 CROCC2H7BZ55 1655 aa35.61■■■■□ 3.29
RPP38-201ENST00000378197 DAPK1P53355 1430 aa35.6■■■■□ 3.29
RPP38-201ENST00000378197 SHANK2Q9UPX8 1470 aa35.57■■■■□ 3.29
RPP38-201ENST00000378197 FAM50AQ14320 339 aaKnown RBP35.57■■■■□ 3.28
RPP38-201ENST00000378197 PLPPR3Q6T4P5 718 aa35.54■■■■□ 3.28
RPP38-201ENST00000378197 ESF1Q9H501 851 aaKnown RBP35.51■■■■□ 3.28
RPP38-201ENST00000378197 GGT6Q6P531 493 aa35.5■■■■□ 3.27
RPP38-201ENST00000378197 KIF3BO15066 747 aa35.47■■■■□ 3.27
RPP38-201ENST00000378197 CNTLNQ9NXG0 1405 aa35.45■■■■□ 3.27
RPP38-201ENST00000378197 CEBPAP49715 358 aaPredicted RBP35.44■■■■□ 3.26
RPP38-201ENST00000378197 CHIC2Q9UKJ5 165 aa35.43■■■■□ 3.26
RPP38-201ENST00000378197 KIF15Q9NS87 1388 aa35.42■■■■□ 3.26
RPP38-201ENST00000378197 DUOX2Q9NRD8 1548 aa35.42■■■■□ 3.26
RPP38-201ENST00000378197 RRP7BPQ9NSQ0 103 aa35.41■■■■□ 3.26
RPP38-201ENST00000378197 C3P01024 1663 aa35.4■■■■□ 3.26
RPP38-201ENST00000378197 CLTCQ00610 1675 aaKnown RBP35.39■■■■□ 3.26
RPP38-201ENST00000378197 ANKRD30AQ9BXX3 1397 aa35.39■■■■□ 3.26
RPP38-201ENST00000378197 PPP6R1Q9UPN7 881 aa35.38■■■■□ 3.25
RPP38-201ENST00000378197 MROH2AA6NES4 1674 aa35.38■■■■□ 3.25
RPP38-201ENST00000378197 EIF2AK4Q9P2K8 1649 aaKnown RBP35.38■■■■□ 3.25
RPP38-201ENST00000378197 ADGRL2O95490 1459 aa35.35■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms