RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 OSCARQ8IYS5 282 aa25.64■■□□□ 1.7
PCDH8-202ENST00000377942 MORC1Q86VD1 984 aa25.64■■□□□ 1.69
PCDH8-202ENST00000377942 ROCK2O75116 1388 aaKnown RBP25.62■■□□□ 1.69
PCDH8-202ENST00000377942 HDGFL2Q7Z4V5 671 aaPredicted RBP25.62■■□□□ 1.69
PCDH8-202ENST00000377942 EIF5BO60841 1220 aaKnown RBP25.62■■□□□ 1.69
PCDH8-202ENST00000377942 LAS1LQ9Y4W2 734 aaKnown RBP25.6■■□□□ 1.69
PCDH8-202ENST00000377942 EIF3AQ14152 1382 aaKnown RBP25.6■■□□□ 1.69
PCDH8-202ENST00000377942 WASHC2CQ9Y4E1 1318 aa25.58■■□□□ 1.69
PCDH8-202ENST00000377942 SUPT16HQ9Y5B9 1047 aaKnown RBP25.58■■□□□ 1.69
PCDH8-202ENST00000377942 STK26Q9P289 416 aa25.58■■□□□ 1.69
PCDH8-202ENST00000377942 RAD54L2Q9Y4B4 1467 aa25.58■■□□□ 1.69
PCDH8-202ENST00000377942 SAFB2Q14151 953 aaKnown RBP eCLIP25.57■■□□□ 1.68
PCDH8-202ENST00000377942 KTN1Q86UP2 1357 aaKnown RBP25.57■■□□□ 1.68
PCDH8-202ENST00000377942 BECN1Q14457 450 aa25.52■■□□□ 1.68
PCDH8-202ENST00000377942 L3MBTL2Q969R5 705 aa25.51■■□□□ 1.67
PCDH8-202ENST00000377942 DDRGK1Q96HY6 314 aa25.51■■□□□ 1.67
PCDH8-202ENST00000377942 SENP3-EIF4A1A0A087X0R7 540 aa25.51■■□□□ 1.67
PCDH8-202ENST00000377942 RALBP1Q15311 655 aa25.5■■□□□ 1.67
PCDH8-202ENST00000377942 CFTRP13569 1480 aa25.5■■□□□ 1.67
PCDH8-202ENST00000377942 EID1Q9Y6B2 187 aa25.49■■□□□ 1.67
PCDH8-202ENST00000377942 ARXQ96QS3 562 aa25.48■■□□□ 1.67
PCDH8-202ENST00000377942 PPP4R2Q9NY27 417 aa25.47■■□□□ 1.67
PCDH8-202ENST00000377942 CASC1Q6TDU7 716 aa25.46■■□□□ 1.67
PCDH8-202ENST00000377942 FRAT1Q92837 279 aaPredicted RBP25.45■■□□□ 1.67
PCDH8-202ENST00000377942 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
PCDH8-202ENST00000377942 CYB5RLQ6IPT4 315 aa25.42■■□□□ 1.66
PCDH8-202ENST00000377942 AQRO60306 1485 aaKnown RBP eCLIP25.42■■□□□ 1.66
PCDH8-202ENST00000377942 HMGXB3Q12766 1538 aa25.41■■□□□ 1.66
PCDH8-202ENST00000377942 CCDC144AA2RUR9 1427 aa25.41■■□□□ 1.66
PCDH8-202ENST00000377942 UACAQ9BZF9 1416 aa25.41■■□□□ 1.66
PCDH8-202ENST00000377942 TERF2IPQ9NYB0 399 aa25.4■■□□□ 1.66
PCDH8-202ENST00000377942 MYOM3Q5VTT5 1437 aa25.39■■□□□ 1.66
PCDH8-202ENST00000377942 SOX12O15370 315 aa25.39■■□□□ 1.65
PCDH8-202ENST00000377942 RTF1Q92541 710 aaKnown RBP25.37■■□□□ 1.65
PCDH8-202ENST00000377942 CALD1Q05682 793 aaKnown RBP25.36■■□□□ 1.65
PCDH8-202ENST00000377942 CUX1P39880 1505 aa25.33■■□□□ 1.65
PCDH8-202ENST00000377942 MRC2Q9UBG0 1479 aa25.33■■□□□ 1.65
PCDH8-202ENST00000377942 DHX57Q6P158 1386 aaKnown RBP25.32■■□□□ 1.64
PCDH8-202ENST00000377942 VGFO15240 615 aaPredicted RBP25.3■■□□□ 1.64
PCDH8-202ENST00000377942 U2AF1L5P0DN76 240 aaPredicted RBP25.3■■□□□ 1.64
PCDH8-202ENST00000377942 U2AF1Q01081 240 aaKnown RBP eCLIP25.3■■□□□ 1.64
PCDH8-202ENST00000377942 ERICH3Q5RHP9 1530 aa25.3■■□□□ 1.64
PCDH8-202ENST00000377942 PAK3O75914 559 aaPredicted RBP25.29■■□□□ 1.64
PCDH8-202ENST00000377942 CHMP4AQ9BY43 222 aa25.29■■□□□ 1.64
PCDH8-202ENST00000377942 CC2D2AQ9P2K1 1620 aa25.28■■□□□ 1.64
PCDH8-202ENST00000377942 IFT140Q96RY7 1462 aa25.28■■□□□ 1.64
PCDH8-202ENST00000377942 NCLP19338 710 aaKnown RBP25.27■■□□□ 1.64
PCDH8-202ENST00000377942 ANP32EQ9BTT0 268 aa25.27■■□□□ 1.64
PCDH8-202ENST00000377942 GOLGA6L22H0YM25 854 aa25.27■■□□□ 1.64
PCDH8-202ENST00000377942 CASKIN1Q8WXD9 1431 aa25.27■■□□□ 1.64
PCDH8-202ENST00000377942 FGD6Q6ZV73 1430 aa25.26■■□□□ 1.63
PCDH8-202ENST00000377942 IPO8O15397 1037 aaKnown RBP25.26■■□□□ 1.63
PCDH8-202ENST00000377942 OS9Q13438 667 aaPredicted RBP25.26■■□□□ 1.63
PCDH8-202ENST00000377942 KIF21BO75037 1637 aa25.24■■□□□ 1.63
PCDH8-202ENST00000377942 NLRP13Q86W25 1043 aa25.24■■□□□ 1.63
PCDH8-202ENST00000377942 NPHP1O15259 732 aa25.23■■□□□ 1.63
PCDH8-202ENST00000377942 RGS3P49796 1198 aa25.22■■□□□ 1.63
PCDH8-202ENST00000377942 NBR1Q14596 966 aa25.22■■□□□ 1.63
PCDH8-202ENST00000377942 STAC3Q96MF2 364 aa25.2■■□□□ 1.63
PCDH8-202ENST00000377942 NGDNQ8NEJ9 315 aaKnown RBP25.2■■□□□ 1.62
PCDH8-202ENST00000377942 NESP48681 1621 aa25.2■■□□□ 1.62
PCDH8-202ENST00000377942 NUTM2DQ5VT03 806 aaPredicted RBP25.2■■□□□ 1.62
PCDH8-202ENST00000377942 TRAK1Q9UPV9 953 aa25.2■■□□□ 1.62
PCDH8-202ENST00000377942 PHLDB1Q86UU1 1377 aa25.19■■□□□ 1.62
PCDH8-202ENST00000377942 LRRC9Q6ZRR7 1453 aa25.19■■□□□ 1.62
PCDH8-202ENST00000377942 TOPBP1Q92547 1522 aa25.18■■□□□ 1.62
PCDH8-202ENST00000377942 CSB-PGBD3P0DP91 1061 aa25.18■■□□□ 1.62
PCDH8-202ENST00000377942 FYCO1Q9BQS8 1478 aa25.18■■□□□ 1.62
PCDH8-202ENST00000377942 ERICH6BQ5W0A0 696 aa25.18■■□□□ 1.62
PCDH8-202ENST00000377942 SYNJ1O43426 1573 aa25.17■■□□□ 1.62
PCDH8-202ENST00000377942 ST20-MTHFSA0A0A6YYL1 179 aa25.16■■□□□ 1.62
PCDH8-202ENST00000377942 FAM69CQ0P6D2 419 aa25.16■■□□□ 1.62
PCDH8-202ENST00000377942 KIF15Q9NS87 1388 aa25.16■■□□□ 1.62
PCDH8-202ENST00000377942 CFAP44Q96MT7 982 aa25.15■■□□□ 1.62
PCDH8-202ENST00000377942 SYNJ2O15056 1496 aa25.14■■□□□ 1.61
PCDH8-202ENST00000377942 TOP2BQ02880 1626 aa25.13■■□□□ 1.61
PCDH8-202ENST00000377942 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
PCDH8-202ENST00000377942 EFCAB5A4FU69 1503 aa25.11■■□□□ 1.61
PCDH8-202ENST00000377942 RCAN3Q9UKA8 241 aa25.11■■□□□ 1.61
PCDH8-202ENST00000377942 EVC2Q86UK5 1308 aa25.11■■□□□ 1.61
PCDH8-202ENST00000377942 PRG4Q92954 1404 aaPredicted RBP25.11■■□□□ 1.61
PCDH8-202ENST00000377942 PDE3BQ13370 1112 aa25.11■■□□□ 1.61
PCDH8-202ENST00000377942 B4GALNT3Q6L9W6 998 aa25.11■■□□□ 1.61
PCDH8-202ENST00000377942 LMOD3Q0VAK6 560 aa25.1■■□□□ 1.61
PCDH8-202ENST00000377942 POLA1P09884 1462 aaPredicted RBP25.1■■□□□ 1.61
PCDH8-202ENST00000377942 NCOA2Q15596 1464 aa25.1■■□□□ 1.61
PCDH8-202ENST00000377942 ZNF644Q9H582 1327 aaPredicted RBP25.08■■□□□ 1.6
PCDH8-202ENST00000377942 PRXQ9BXM0 1461 aa25.07■■□□□ 1.6
PCDH8-202ENST00000377942 GOLGA2Q08379 1002 aa25.06■■□□□ 1.6
PCDH8-202ENST00000377942 ANKRD50Q9ULJ7 1429 aa25.06■■□□□ 1.6
PCDH8-202ENST00000377942 AMPHP49418 695 aa25.06■■□□□ 1.6
PCDH8-202ENST00000377942 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.06■■□□□ 1.6
PCDH8-202ENST00000377942 DNMBPQ6XZF7 1577 aa25.05■■□□□ 1.6
PCDH8-202ENST00000377942 MYBBP1AQ9BQG0 1328 aaKnown RBP25.05■■□□□ 1.6
PCDH8-202ENST00000377942 USP47Q96K76 1375 aa25.05■■□□□ 1.6
PCDH8-202ENST00000377942 KCNJ4P48050 445 aa25.04■■□□□ 1.6
PCDH8-202ENST00000377942 PANK3Q9H999 370 aa25.04■■□□□ 1.6
PCDH8-202ENST00000377942 STK31Q9BXU1 1019 aa25.04■■□□□ 1.6
PCDH8-202ENST00000377942 HDAC5Q9UQL6 1122 aa25.03■■□□□ 1.6
PCDH8-202ENST00000377942 CGNL1Q0VF96 1302 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms