RNA–Protein interactions for RNA: ENST00000377533.7

SCRIB-203, Transcript of scribbled planar cell polarity protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCRIB, Length 5,108 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-203ENST00000377533 FOXD1Q16676 465 aa22.1■■□□□ 1.13
SCRIB-203ENST00000377533 FRAT1Q92837 279 aaPredicted RBP22.09■■□□□ 1.13
SCRIB-203ENST00000377533 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
SCRIB-203ENST00000377533 HDGFL2Q7Z4V5 671 aaPredicted RBP22.08■■□□□ 1.13
SCRIB-203ENST00000377533 KIF3BO15066 747 aa22.08■■□□□ 1.13
SCRIB-203ENST00000377533 SAFB2Q14151 953 aaKnown RBP eCLIP22.08■■□□□ 1.13
SCRIB-203ENST00000377533 SPAG9O60271 1321 aaKnown RBP22.07■■□□□ 1.12
SCRIB-203ENST00000377533 ANP32EQ9BTT0 268 aa22.06■■□□□ 1.12
SCRIB-203ENST00000377533 NCLP19338 710 aaKnown RBP22.05■■□□□ 1.12
SCRIB-203ENST00000377533 STK26Q9P289 416 aa22.05■■□□□ 1.12
SCRIB-203ENST00000377533 GOLGA6L22H0YM25 854 aa22.05■■□□□ 1.12
SCRIB-203ENST00000377533 ROCK2O75116 1388 aaKnown RBP22.04■■□□□ 1.12
SCRIB-203ENST00000377533 KTN1Q86UP2 1357 aaKnown RBP22.04■■□□□ 1.12
SCRIB-203ENST00000377533 HNRNPMP52272 730 aaKnown RBP eCLIP22.04■■□□□ 1.12
SCRIB-203ENST00000377533 EIF3AQ14152 1382 aaKnown RBP21.99■■□□□ 1.11
SCRIB-203ENST00000377533 SOX12O15370 315 aa21.97■■□□□ 1.11
SCRIB-203ENST00000377533 RALBP1Q15311 655 aa21.97■■□□□ 1.11
SCRIB-203ENST00000377533 WASHC2CQ9Y4E1 1318 aa21.95■■□□□ 1.1
SCRIB-203ENST00000377533 RGS3P49796 1198 aa21.95■■□□□ 1.1
SCRIB-203ENST00000377533 RTF1Q92541 710 aaKnown RBP21.94■■□□□ 1.1
SCRIB-203ENST00000377533 PTPRGP23470 1445 aa21.94■■□□□ 1.1
SCRIB-203ENST00000377533 OS9Q13438 667 aaPredicted RBP21.94■■□□□ 1.1
SCRIB-203ENST00000377533 ERICH6BQ5W0A0 696 aa21.94■■□□□ 1.1
SCRIB-203ENST00000377533 L3MBTL2Q969R5 705 aa21.93■■□□□ 1.1
SCRIB-203ENST00000377533 NPHP1O15259 732 aa21.91■■□□□ 1.1
SCRIB-203ENST00000377533 CALD1Q05682 793 aaKnown RBP21.9■■□□□ 1.1
SCRIB-203ENST00000377533 EID1Q9Y6B2 187 aa21.89■■□□□ 1.1
SCRIB-203ENST00000377533 TERF2IPQ9NYB0 399 aa21.88■■□□□ 1.09
SCRIB-203ENST00000377533 U2AF1L5P0DN76 240 aaPredicted RBP21.87■■□□□ 1.09
SCRIB-203ENST00000377533 U2AF1Q01081 240 aaKnown RBP eCLIP21.87■■□□□ 1.09
SCRIB-203ENST00000377533 IPO8O15397 1037 aaKnown RBP21.86■■□□□ 1.09
SCRIB-203ENST00000377533 CDK11BP21127 795 aaKnown RBP21.85■■□□□ 1.09
SCRIB-203ENST00000377533 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
SCRIB-203ENST00000377533 PAK3O75914 559 aaPredicted RBP21.84■■□□□ 1.09
SCRIB-203ENST00000377533 GAPVD1Q14C86 1478 aa21.84■■□□□ 1.09
SCRIB-203ENST00000377533 ZRSR1Q15695 479 aaKnown RBP21.84■■□□□ 1.09
SCRIB-203ENST00000377533 CHMP4AQ9BY43 222 aa21.83■■□□□ 1.09
SCRIB-203ENST00000377533 FGD5Q6ZNL6 1462 aa21.83■■□□□ 1.08
SCRIB-203ENST00000377533 B4GALNT3Q6L9W6 998 aa21.82■■□□□ 1.08
SCRIB-203ENST00000377533 IGF1RP08069 1367 aa21.82■■□□□ 1.08
SCRIB-203ENST00000377533 NCAPD3P42695 1498 aa21.82■■□□□ 1.08
SCRIB-203ENST00000377533 OSCARQ8IYS5 282 aa21.81■■□□□ 1.08
SCRIB-203ENST00000377533 CFAP44Q96MT7 982 aa21.8■■□□□ 1.08
SCRIB-203ENST00000377533 CCDC144AA2RUR9 1427 aa21.79■■□□□ 1.08
SCRIB-203ENST00000377533 KCNJ4P48050 445 aa21.79■■□□□ 1.08
SCRIB-203ENST00000377533 GLIPR1L2Q4G1C9 344 aa21.79■■□□□ 1.08
SCRIB-203ENST00000377533 TRIM44Q96DX7 344 aaPredicted RBP21.78■■□□□ 1.08
SCRIB-203ENST00000377533 FGD1P98174 961 aa21.77■■□□□ 1.08
SCRIB-203ENST00000377533 GOLGA2Q08379 1002 aa21.77■■□□□ 1.08
SCRIB-203ENST00000377533 UACAQ9BZF9 1416 aa21.77■■□□□ 1.08
SCRIB-203ENST00000377533 NLRP13Q86W25 1043 aa21.77■■□□□ 1.07
SCRIB-203ENST00000377533 CSB-PGBD3P0DP91 1061 aa21.76■■□□□ 1.07
SCRIB-203ENST00000377533 RCAN3Q9UKA8 241 aa21.74■■□□□ 1.07
SCRIB-203ENST00000377533 HSP90AB1P08238 724 aaKnown RBP21.72■■□□□ 1.07
SCRIB-203ENST00000377533 NGDNQ8NEJ9 315 aaKnown RBP21.72■■□□□ 1.07
SCRIB-203ENST00000377533 VGFO15240 615 aaPredicted RBP21.72■■□□□ 1.07
SCRIB-203ENST00000377533 NOP58Q9Y2X3 529 aaKnown RBP21.72■■□□□ 1.07
SCRIB-203ENST00000377533 CYB5RLQ6IPT4 315 aa21.71■■□□□ 1.07
SCRIB-203ENST00000377533 RAD54L2Q9Y4B4 1467 aa21.7■■□□□ 1.06
SCRIB-203ENST00000377533 NUTM2DQ5VT03 806 aaPredicted RBP21.7■■□□□ 1.06
SCRIB-203ENST00000377533 DHX57Q6P158 1386 aaKnown RBP21.69■■□□□ 1.06
SCRIB-203ENST00000377533 PHLDB1Q86UU1 1377 aa21.69■■□□□ 1.06
SCRIB-203ENST00000377533 MCCP23508 829 aa21.69■■□□□ 1.06
SCRIB-203ENST00000377533 TRAK1Q9UPV9 953 aa21.69■■□□□ 1.06
SCRIB-203ENST00000377533 MYOM3Q5VTT5 1437 aa21.67■■□□□ 1.06
SCRIB-203ENST00000377533 PDE3BQ13370 1112 aa21.67■■□□□ 1.06
SCRIB-203ENST00000377533 STK31Q9BXU1 1019 aa21.66■■□□□ 1.06
SCRIB-203ENST00000377533 LMOD3Q0VAK6 560 aa21.66■■□□□ 1.06
SCRIB-203ENST00000377533 RWDD1Q9H446 243 aaPredicted RBP21.66■■□□□ 1.06
SCRIB-203ENST00000377533 ST20-MTHFSA0A0A6YYL1 179 aa21.66■■□□□ 1.06
SCRIB-203ENST00000377533 HSCBQ8IWL3 235 aa21.65■■□□□ 1.06
SCRIB-203ENST00000377533 PTMAP06454 111 aaKnown RBP21.64■■□□□ 1.06
SCRIB-203ENST00000377533 HDAC5Q9UQL6 1122 aa21.64■■□□□ 1.05
SCRIB-203ENST00000377533 KIF15Q9NS87 1388 aa21.64■■□□□ 1.05
SCRIB-203ENST00000377533 AMPHP49418 695 aa21.62■■□□□ 1.05
SCRIB-203ENST00000377533 ITPRIPQ8IWB1 547 aa21.62■■□□□ 1.05
SCRIB-203ENST00000377533 NAP1L2Q9ULW6 460 aaPredicted RBP21.6■■□□□ 1.05
SCRIB-203ENST00000377533 EVC2Q86UK5 1308 aa21.59■■□□□ 1.05
SCRIB-203ENST00000377533 SMC4Q9NTJ3 1288 aa21.58■■□□□ 1.05
SCRIB-203ENST00000377533 MYBBP1AQ9BQG0 1328 aaKnown RBP21.58■■□□□ 1.04
SCRIB-203ENST00000377533 TPRNQ4KMQ1 711 aa21.57■■□□□ 1.04
SCRIB-203ENST00000377533 AQRO60306 1485 aaKnown RBP eCLIP21.57■■□□□ 1.042e-7■■■■■ 31.1
SCRIB-203ENST00000377533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.57■■□□□ 1.041e-6■■■■□ 25.2
SCRIB-203ENST00000377533 PMFBP1Q8TBY8 1022 aa21.57■■□□□ 1.04
SCRIB-203ENST00000377533 STAC3Q96MF2 364 aa21.57■■□□□ 1.04
SCRIB-203ENST00000377533 PANK3Q9H999 370 aa21.57■■□□□ 1.04
SCRIB-203ENST00000377533 KIAA1211Q6ZU35 1233 aa21.56■■□□□ 1.04
SCRIB-203ENST00000377533 CUX1P39880 1505 aa21.56■■□□□ 1.04
SCRIB-203ENST00000377533 FGD6Q6ZV73 1430 aa21.55■■□□□ 1.04
SCRIB-203ENST00000377533 APBB1O00213 710 aa21.55■■□□□ 1.04
SCRIB-203ENST00000377533 GOLGA6L4A6NEF3 574 aa21.54■■□□□ 1.04
SCRIB-203ENST00000377533 GRIN2BQ13224 1484 aa21.54■■□□□ 1.04
SCRIB-203ENST00000377533 CGNL1Q0VF96 1302 aa21.54■■□□□ 1.04
SCRIB-203ENST00000377533 TCERG1O14776 1098 aaKnown RBP21.54■■□□□ 1.04
SCRIB-203ENST00000377533 HMMRO75330 724 aa21.54■■□□□ 1.04
SCRIB-203ENST00000377533 ZNF330Q9Y3S2 320 aaPredicted RBP21.53■■□□□ 1.04
SCRIB-203ENST00000377533 CENPJQ9HC77 1338 aaPredicted RBP21.53■■□□□ 1.04
SCRIB-203ENST00000377533 USP47Q96K76 1375 aa21.53■■□□□ 1.04
SCRIB-203ENST00000377533 NUTM2FA1L443 756 aa21.53■■□□□ 1.04
SCRIB-203ENST00000377533 CCDC146Q8IYE0 955 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms