RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 ARHGAP5Q13017 1502 aa35.68■■■■□ 3.3
YIF1A-202ENST00000376899 GPATCH8Q9UKJ3 1502 aaKnown RBP35.67■■■■□ 3.3
YIF1A-202ENST00000376899 EFCAB2Q5VUJ9 269 aa35.65■■■■□ 3.3
YIF1A-202ENST00000376899 NCOA2Q15596 1464 aa35.62■■■■□ 3.29
YIF1A-202ENST00000376899 FRMPD1Q5SYB0 1578 aa35.62■■■■□ 3.29
YIF1A-202ENST00000376899 KANK4Q5T7N3 995 aaPredicted RBP35.61■■■■□ 3.29
YIF1A-202ENST00000376899 ITSN2Q9NZM3 1697 aa35.61■■■■□ 3.29
YIF1A-202ENST00000376899 CCNB3Q8WWL7 1395 aa35.61■■■■□ 3.29
YIF1A-202ENST00000376899 APLP2Q06481 763 aa35.6■■■■□ 3.29
YIF1A-202ENST00000376899 RICTORQ6R327 1708 aa35.6■■■■□ 3.29
YIF1A-202ENST00000376899 ADGRL1O94910 1474 aa35.6■■■■□ 3.29
YIF1A-202ENST00000376899 DENND4BO75064 1496 aaPredicted RBP35.58■■■■□ 3.29
YIF1A-202ENST00000376899 SCAPERQ9BY12 1400 aa35.53■■■■□ 3.28
YIF1A-202ENST00000376899 ABCC1P33527 1531 aa35.52■■■■□ 3.28
YIF1A-202ENST00000376899 SAMD9LQ8IVG5 1584 aa35.51■■■■□ 3.28
YIF1A-202ENST00000376899 RAPGEF3O95398 923 aa35.5■■■■□ 3.27
YIF1A-202ENST00000376899 POGZQ7Z3K3 1410 aa35.49■■■■□ 3.27
YIF1A-202ENST00000376899 ZMYM4Q5VZL5 1548 aa35.47■■■■□ 3.27
YIF1A-202ENST00000376899 CFDP1Q9UEE9 299 aaPredicted RBP35.46■■■■□ 3.27
YIF1A-202ENST00000376899 ARHGEF12Q9NZN5 1544 aa35.43■■■■□ 3.26
YIF1A-202ENST00000376899 PLEKHH2Q8IVE3 1493 aa35.41■■■■□ 3.26
YIF1A-202ENST00000376899 ZNF518AQ6AHZ1 1483 aa35.41■■■■□ 3.26
YIF1A-202ENST00000376899 KDM5CP41229 1560 aa35.4■■■■□ 3.26
YIF1A-202ENST00000376899 KIAA1107Q9UPP5 1409 aa35.39■■■■□ 3.26
YIF1A-202ENST00000376899 SYCP2Q9BX26 1530 aa35.38■■■■□ 3.25
YIF1A-202ENST00000376899 MYOM3Q5VTT5 1437 aa35.37■■■■□ 3.25
YIF1A-202ENST00000376899 ZNF777Q9ULD5 760 aaPredicted RBP35.36■■■■□ 3.25
YIF1A-202ENST00000376899 MAGI2Q86UL8 1455 aa35.35■■■■□ 3.25
YIF1A-202ENST00000376899 ARHGEF40Q8TER5 1519 aa35.35■■■■□ 3.25
YIF1A-202ENST00000376899 TRAPPC8Q9Y2L5 1435 aa35.34■■■■□ 3.25
YIF1A-202ENST00000376899 MIA2Q96PC5 1412 aa35.32■■■■□ 3.24
YIF1A-202ENST00000376899 CAMSAP2Q08AD1 1489 aa35.31■■■■□ 3.24
YIF1A-202ENST00000376899 ZFYVE16Q7Z3T8 1539 aa35.29■■■■□ 3.24
YIF1A-202ENST00000376899 HECW2Q9P2P5 1572 aa35.29■■■■□ 3.24
YIF1A-202ENST00000376899 ZNF644Q9H582 1327 aaPredicted RBP35.29■■■■□ 3.24
YIF1A-202ENST00000376899 AFAP1Q8N556 730 aa35.28■■■■□ 3.24
YIF1A-202ENST00000376899 MBD5Q9P267 1494 aa35.27■■■■□ 3.24
YIF1A-202ENST00000376899 MLH3Q9UHC1 1453 aa35.25■■■■□ 3.23
YIF1A-202ENST00000376899 YEATS2Q9ULM3 1422 aa35.24■■■■□ 3.23
YIF1A-202ENST00000376899 HNRNPMP52272 730 aaKnown RBP eCLIP35.23■■■■□ 3.23
YIF1A-202ENST00000376899 ARHGEF5Q12774 1597 aa35.2■■■■□ 3.23
YIF1A-202ENST00000376899 KIDINS220Q9ULH0 1771 aa35.19■■■■□ 3.22
YIF1A-202ENST00000376899 PTPN23Q9H3S7 1636 aa35.17■■■■□ 3.22
YIF1A-202ENST00000376899 FGD6Q6ZV73 1430 aa35.17■■■■□ 3.22
YIF1A-202ENST00000376899 INO80Q9ULG1 1556 aaPredicted RBP35.16■■■■□ 3.22
YIF1A-202ENST00000376899 ABCA6Q8N139 1617 aa35.15■■■■□ 3.22
YIF1A-202ENST00000376899 DIP2CQ9Y2E4 1556 aa35.15■■■■□ 3.22
YIF1A-202ENST00000376899 CCDC141Q6ZP82 1450 aa35.15■■■■□ 3.22
YIF1A-202ENST00000376899 TCOF1Q13428 1488 aaKnown RBP35.14■■■■□ 3.22
YIF1A-202ENST00000376899 ATP10AO60312 1499 aa35.12■■■■□ 3.21
YIF1A-202ENST00000376899 ATP7AQ04656 1500 aa35.11■■■■□ 3.21
YIF1A-202ENST00000376899 RSPH4AQ5TD94 716 aa35.11■■■■□ 3.21
YIF1A-202ENST00000376899 REREQ9P2R6 1566 aa35.1■■■■□ 3.21
YIF1A-202ENST00000376899 SIGLEC1Q9BZZ2 1709 aa35.09■■■■□ 3.21
YIF1A-202ENST00000376899 SPAG9O60271 1321 aaKnown RBP35.09■■■■□ 3.21
YIF1A-202ENST00000376899 C9orf84Q5VXU9 1444 aa35.09■■■■□ 3.21
YIF1A-202ENST00000376899 RTEL1-TNFRSF6BF6WH68 1400 aa35.06■■■■□ 3.2
YIF1A-202ENST00000376899 MYT1LQ9UL68 1186 aa35.03■■■■□ 3.2
YIF1A-202ENST00000376899 PPARGC1BQ86YN6 1023 aaKnown RBP35.02■■■■□ 3.2
YIF1A-202ENST00000376899 MAST1Q9Y2H9 1570 aa35.01■■■■□ 3.2
YIF1A-202ENST00000376899 BCORL1Q5H9F3 1711 aa35■■■■□ 3.19
YIF1A-202ENST00000376899 DNMT1P26358 1616 aaKnown RBP34.99■■■■□ 3.19
YIF1A-202ENST00000376899 CROCC2H7BZ55 1655 aa34.99■■■■□ 3.19
YIF1A-202ENST00000376899 KDM4FA0A1W2PPD8 638 aa34.97■■■■□ 3.19
YIF1A-202ENST00000376899 ADGBQ8N7X0 1667 aa34.97■■■■□ 3.19
YIF1A-202ENST00000376899 AGLP35573 1532 aa34.96■■■■□ 3.19
YIF1A-202ENST00000376899 SHANK2Q9UPX8 1470 aa34.94■■■■□ 3.18
YIF1A-202ENST00000376899 PLXNC1O60486 1568 aa34.94■■■■□ 3.18
YIF1A-202ENST00000376899 ADAMTSL3P82987 1691 aa34.94■■■■□ 3.18
YIF1A-202ENST00000376899 ABCC5O15440 1437 aa34.93■■■■□ 3.18
YIF1A-202ENST00000376899 DAPK1P53355 1430 aa34.92■■■■□ 3.18
YIF1A-202ENST00000376899 ARID4BQ4LE39 1312 aaPredicted RBP34.91■■■■□ 3.18
YIF1A-202ENST00000376899 TSPY4P0CV99 314 aa34.91■■■■□ 3.18
YIF1A-202ENST00000376899 TSPY10P0CW01 314 aa34.91■■■■□ 3.18
YIF1A-202ENST00000376899 A2MP01023 1474 aa34.9■■■■□ 3.18
YIF1A-202ENST00000376899 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.85■■■■□ 3.171e-8■■■■□ 23.1
YIF1A-202ENST00000376899 RRBP1Q9P2E9 1410 aaKnown RBP34.82■■■■□ 3.17
YIF1A-202ENST00000376899 FAM50AQ14320 339 aaKnown RBP34.82■■■■□ 3.16
YIF1A-202ENST00000376899 MADDQ8WXG6 1647 aa34.81■■■■□ 3.16
YIF1A-202ENST00000376899 DHX29Q7Z478 1369 aaKnown RBP34.79■■■■□ 3.16
YIF1A-202ENST00000376899 FER1L4A9Z1Z3 1794 aa34.76■■■■□ 3.15
YIF1A-202ENST00000376899 ADGRL2O95490 1459 aa34.74■■■■□ 3.15
YIF1A-202ENST00000376899 RIMS1Q86UR5 1692 aaKnown RBP34.71■■■■□ 3.15
YIF1A-202ENST00000376899 MLECQ14165 292 aa34.71■■■■□ 3.15
YIF1A-202ENST00000376899 DUOX2Q9NRD8 1548 aa34.71■■■■□ 3.15
YIF1A-202ENST00000376899 PTPRKQ15262 1439 aa34.68■■■■□ 3.14
YIF1A-202ENST00000376899 KIF15Q9NS87 1388 aa34.68■■■■□ 3.14
YIF1A-202ENST00000376899 EIF2AK4Q9P2K8 1649 aaKnown RBP34.68■■■■□ 3.14
YIF1A-202ENST00000376899 ANKRD30AQ9BXX3 1397 aa34.67■■■■□ 3.14
YIF1A-202ENST00000376899 PTPRMP28827 1452 aa34.66■■■■□ 3.14
YIF1A-202ENST00000376899 NCOA1Q15788 1441 aa34.66■■■■□ 3.14
YIF1A-202ENST00000376899 AEBP2Q6ZN18 517 aaPredicted RBP34.63■■■■□ 3.13
YIF1A-202ENST00000376899 CHIC2Q9UKJ5 165 aa34.63■■■■□ 3.13
YIF1A-202ENST00000376899 RNF17Q9BXT8 1623 aaKnown RBP34.61■■■■□ 3.13
YIF1A-202ENST00000376899 ERBINQ96RT1 1412 aa34.61■■■■□ 3.13
YIF1A-202ENST00000376899 RRP7BPQ9NSQ0 103 aa34.59■■■■□ 3.13
YIF1A-202ENST00000376899 ROCK1Q13464 1354 aa34.58■■■■□ 3.13
YIF1A-202ENST00000376899 KIF3BO15066 747 aa34.57■■■■□ 3.12
YIF1A-202ENST00000376899 CNTLNQ9NXG0 1405 aa34.55■■■■□ 3.12
YIF1A-202ENST00000376899 FAM135AQ9P2D6 1515 aa34.55■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms