RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 SCAPERQ9BY12 1400 aa28.77■■■□□ 2.2
HLA-A-201ENST00000376802 MAGI2Q86UL8 1455 aa28.76■■■□□ 2.2
HLA-A-201ENST00000376802 RIMS1Q86UR5 1692 aaKnown RBP28.76■■■□□ 2.19
HLA-A-201ENST00000376802 POGZQ7Z3K3 1410 aa28.75■■■□□ 2.19
HLA-A-201ENST00000376802 CDK11AQ9UQ88 783 aaPredicted RBP28.74■■■□□ 2.19
HLA-A-201ENST00000376802 TROQ12816 1431 aaPredicted RBP28.72■■■□□ 2.19
HLA-A-201ENST00000376802 EFCAB2Q5VUJ9 269 aa28.7■■■□□ 2.19
HLA-A-201ENST00000376802 PCF11O94913 1555 aaKnown RBP28.67■■■□□ 2.18
HLA-A-201ENST00000376802 LMTK3Q96Q04 1460 aa28.66■■■□□ 2.18
HLA-A-201ENST00000376802 CLIP1P30622 1438 aa28.64■■■□□ 2.17
HLA-A-201ENST00000376802 ATP10AO60312 1499 aa28.62■■■□□ 2.17
HLA-A-201ENST00000376802 CDC42BPBQ9Y5S2 1711 aa28.62■■■□□ 2.17
HLA-A-201ENST00000376802 CASKIN1Q8WXD9 1431 aa28.62■■■□□ 2.17
HLA-A-201ENST00000376802 ARHGAP5Q13017 1502 aa28.62■■■□□ 2.17
HLA-A-201ENST00000376802 FER1L4A9Z1Z3 1794 aa28.6■■■□□ 2.17
HLA-A-201ENST00000376802 ZNF518AQ6AHZ1 1483 aa28.59■■■□□ 2.17
HLA-A-201ENST00000376802 KDM5CP41229 1560 aa28.58■■■□□ 2.17
HLA-A-201ENST00000376802 MLECQ14165 292 aa28.58■■■□□ 2.17
HLA-A-201ENST00000376802 AFAP1Q8N556 730 aa28.57■■■□□ 2.16
HLA-A-201ENST00000376802 C9orf84Q5VXU9 1444 aa28.57■■■□□ 2.16
HLA-A-201ENST00000376802 CCDC18Q5T9S5 1454 aa28.56■■■□□ 2.16
HLA-A-201ENST00000376802 ARHGEF12Q9NZN5 1544 aa28.54■■■□□ 2.16
HLA-A-201ENST00000376802 PREX2Q70Z35 1606 aa28.54■■■□□ 2.16
HLA-A-201ENST00000376802 PLPPR3Q6T4P5 718 aa28.53■■■□□ 2.16
HLA-A-201ENST00000376802 HSPA2P54652 639 aa28.49■■■□□ 2.15
HLA-A-201ENST00000376802 CDC42BPAQ5VT25 1732 aa28.49■■■□□ 2.15
HLA-A-201ENST00000376802 FYCO1Q9BQS8 1478 aa28.49■■■□□ 2.15
HLA-A-201ENST00000376802 DIP2CQ9Y2E4 1556 aa28.48■■■□□ 2.15
HLA-A-201ENST00000376802 ABCC1P33527 1531 aa28.46■■■□□ 2.15
HLA-A-201ENST00000376802 MLH3Q9UHC1 1453 aa28.46■■■□□ 2.15
HLA-A-201ENST00000376802 TRAPPC8Q9Y2L5 1435 aa28.46■■■□□ 2.15
HLA-A-201ENST00000376802 ITSN2Q9NZM3 1697 aa28.45■■■□□ 2.14
HLA-A-201ENST00000376802 ABCA6Q8N139 1617 aa28.44■■■□□ 2.14
HLA-A-201ENST00000376802 REREQ9P2R6 1566 aa28.43■■■□□ 2.14
HLA-A-201ENST00000376802 FBXO41Q8TF61 875 aa28.42■■■□□ 2.14
HLA-A-201ENST00000376802 CEBPAP49715 358 aaPredicted RBP28.4■■■□□ 2.14
HLA-A-201ENST00000376802 MYT1LQ9UL68 1186 aa28.4■■■□□ 2.14
HLA-A-201ENST00000376802 KIDINS220Q9ULH0 1771 aa28.38■■■□□ 2.13
HLA-A-201ENST00000376802 PREX1Q8TCU6 1659 aa28.37■■■□□ 2.13
HLA-A-201ENST00000376802 AGLP35573 1532 aa28.34■■■□□ 2.13
HLA-A-201ENST00000376802 GPATCH8Q9UKJ3 1502 aaKnown RBP28.34■■■□□ 2.13
HLA-A-201ENST00000376802 SAMD9LQ8IVG5 1584 aa28.34■■■□□ 2.13
HLA-A-201ENST00000376802 SETD1BQ9UPS6 1966 aaKnown RBP28.31■■■□□ 2.12
HLA-A-201ENST00000376802 ZNF777Q9ULD5 760 aaPredicted RBP28.29■■■□□ 2.12
HLA-A-201ENST00000376802 C3P01024 1663 aa28.28■■■□□ 2.12
HLA-A-201ENST00000376802 SYCP2Q9BX26 1530 aa28.27■■■□□ 2.12
HLA-A-201ENST00000376802 HNRNPMP52272 730 aaKnown RBP eCLIP28.24■■■□□ 2.11
HLA-A-201ENST00000376802 STRCQ7RTU9 1775 aa28.23■■■□□ 2.11
HLA-A-201ENST00000376802 KIAA1107Q9UPP5 1409 aa28.21■■■□□ 2.11
HLA-A-201ENST00000376802 UHRF1BP1Q6BDS2 1440 aa28.2■■■□□ 2.1
HLA-A-201ENST00000376802 MTUS2Q5JR59 1369 aa28.2■■■□□ 2.1
HLA-A-201ENST00000376802 CCNB3Q8WWL7 1395 aa28.2■■■□□ 2.1
HLA-A-201ENST00000376802 SPAG9O60271 1321 aaKnown RBP28.2■■■□□ 2.1
HLA-A-201ENST00000376802 CFDP1Q9UEE9 299 aaPredicted RBP28.19■■■□□ 2.1
HLA-A-201ENST00000376802 ATP7AQ04656 1500 aa28.17■■■□□ 2.1
HLA-A-201ENST00000376802 PLEKHH2Q8IVE3 1493 aa28.16■■■□□ 2.1
HLA-A-201ENST00000376802 INO80Q9ULG1 1556 aaPredicted RBP28.16■■■□□ 2.1
HLA-A-201ENST00000376802 SUPT6HQ7KZ85 1726 aaKnown RBP28.16■■■□□ 2.1
HLA-A-201ENST00000376802 ESF1Q9H501 851 aaKnown RBP28.15■■■□□ 2.1
HLA-A-201ENST00000376802 TIAM1Q13009 1591 aa28.14■■■□□ 2.1
HLA-A-201ENST00000376802 CERKQ8TCT0 537 aa28.14■■■□□ 2.09
HLA-A-201ENST00000376802 CNTLNQ9NXG0 1405 aa28.14■■■□□ 2.09
HLA-A-201ENST00000376802 CEP162Q5TB80 1403 aa28.13■■■□□ 2.09
HLA-A-201ENST00000376802 PLXNC1O60486 1568 aa28.11■■■□□ 2.09
HLA-A-201ENST00000376802 MROH2AA6NES4 1674 aa28.11■■■□□ 2.09
HLA-A-201ENST00000376802 EHBP1L1Q8N3D4 1523 aa28.11■■■□□ 2.09
HLA-A-201ENST00000376802 ZNF644Q9H582 1327 aaPredicted RBP28.1■■■□□ 2.09
HLA-A-201ENST00000376802 DMRT2Q9Y5R5 561 aa28.08■■■□□ 2.09
HLA-A-201ENST00000376802 A2MP01023 1474 aa28.07■■■□□ 2.08
HLA-A-201ENST00000376802 MBD5Q9P267 1494 aa28.06■■■□□ 2.08
HLA-A-201ENST00000376802 ZMYM3Q14202 1370 aa28.04■■■□□ 2.08
HLA-A-201ENST00000376802 CLTCQ00610 1675 aaKnown RBP28.04■■■□□ 2.08
HLA-A-201ENST00000376802 NPATQ14207 1427 aa28.03■■■□□ 2.08
HLA-A-201ENST00000376802 ADGBQ8N7X0 1667 aa28.03■■■□□ 2.08
HLA-A-201ENST00000376802 PTPRTO14522 1441 aa28■■■□□ 2.07
HLA-A-201ENST00000376802 RTEL1-TNFRSF6BF6WH68 1400 aa27.96■■■□□ 2.07
HLA-A-201ENST00000376802 NCOA1Q15788 1441 aa27.96■■■□□ 2.07
HLA-A-201ENST00000376802 NCOA2Q15596 1464 aa27.96■■■□□ 2.07
HLA-A-201ENST00000376802 GGT6Q6P531 493 aa27.95■■■□□ 2.07
HLA-A-201ENST00000376802 CAMSAP1Q5T5Y3 1602 aa27.93■■■□□ 2.06
HLA-A-201ENST00000376802 PTPRKQ15262 1439 aa27.92■■■□□ 2.06
HLA-A-201ENST00000376802 PPP6R1Q9UPN7 881 aa27.91■■■□□ 2.06
HLA-A-201ENST00000376802 DHX29Q7Z478 1369 aaKnown RBP27.9■■■□□ 2.06
HLA-A-201ENST00000376802 CAMSAP2Q08AD1 1489 aa27.9■■■□□ 2.06
HLA-A-201ENST00000376802 MYO3AQ8NEV4 1616 aa27.9■■■□□ 2.06
HLA-A-201ENST00000376802 ZNF142P52746 1687 aaPredicted RBP27.89■■■□□ 2.06
HLA-A-201ENST00000376802 LOC105371045A0A1W2PR82 267 aa27.89■■■□□ 2.05
HLA-A-201ENST00000376802 LTBP4Q8N2S1 1624 aa27.88■■■□□ 2.05
HLA-A-201ENST00000376802 CCDC141Q6ZP82 1450 aa27.87■■■□□ 2.05
HLA-A-201ENST00000376802 CEP170BQ9Y4F5 1589 aaPredicted RBP27.84■■■□□ 2.05
HLA-A-201ENST00000376802 VPS8Q8N3P4 1428 aa27.84■■■□□ 2.05
HLA-A-201ENST00000376802 RSPH4AQ5TD94 716 aa27.83■■■□□ 2.05
HLA-A-201ENST00000376802 NCKAP5LQ9HCH0 1330 aa27.82■■■□□ 2.04
HLA-A-201ENST00000376802 LRRC9Q6ZRR7 1453 aa27.82■■■□□ 2.04
HLA-A-201ENST00000376802 ARHGEF5Q12774 1597 aa27.81■■■□□ 2.04
HLA-A-201ENST00000376802 KIF3BO15066 747 aa27.79■■■□□ 2.04
HLA-A-201ENST00000376802 PLA2R1Q13018 1463 aa27.79■■■□□ 2.04
HLA-A-201ENST00000376802 TCOF1Q13428 1488 aaKnown RBP27.77■■■□□ 2.04
HLA-A-201ENST00000376802 PKD2Q13563 968 aa27.74■■■□□ 2.03
HLA-A-201ENST00000376802 KANK4Q5T7N3 995 aaPredicted RBP27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms