RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 ZNF777Q9ULD5 760 aaPredicted RBP21.55■■□□□ 1.04
SSH3-203ENST00000376757 CUL7Q14999 1698 aa21.54■■□□□ 1.04
SSH3-203ENST00000376757 PAK3O75914 559 aaPredicted RBP21.54■■□□□ 1.04
SSH3-203ENST00000376757 ZBED9Q6R2W3 1325 aa21.52■■□□□ 1.04
SSH3-203ENST00000376757 UGGT2Q9NYU1 1516 aa21.52■■□□□ 1.04
SSH3-203ENST00000376757 EHBP1L1Q8N3D4 1523 aa21.51■■□□□ 1.03
SSH3-203ENST00000376757 NCOA1Q15788 1441 aa21.5■■□□□ 1.03
SSH3-203ENST00000376757 SAMD9Q5K651 1589 aa21.47■■□□□ 1.03
SSH3-203ENST00000376757 CCDC136Q96JN2 1154 aa21.47■■□□□ 1.03
SSH3-203ENST00000376757 DEKP35659 375 aaKnown RBP21.44■■□□□ 1.02
SSH3-203ENST00000376757 KDM2AQ9Y2K7 1162 aa21.44■■□□□ 1.02
SSH3-203ENST00000376757 ANKRD30BQ9BXX2 1392 aa21.44■■□□□ 1.02
SSH3-203ENST00000376757 EPRSP07814 1512 aaKnown RBP21.43■■□□□ 1.02
SSH3-203ENST00000376757 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
SSH3-203ENST00000376757 NPM2Q86SE8 214 aaKnown RBP21.4■■□□□ 1.02
SSH3-203ENST00000376757 NOP58Q9Y2X3 529 aaKnown RBP21.4■■□□□ 1.02
SSH3-203ENST00000376757 HECW1Q76N89 1606 aa21.38■■□□□ 1.01
SSH3-203ENST00000376757 LAMC3Q9Y6N6 1575 aa21.37■■□□□ 1.01
SSH3-203ENST00000376757 PDS5BQ9NTI5 1447 aa21.37■■□□□ 1.01
SSH3-203ENST00000376757 ERICH6BQ5W0A0 696 aa21.37■■□□□ 1.01
SSH3-203ENST00000376757 TMC1Q8TDI8 760 aa21.37■■□□□ 1.01
SSH3-203ENST00000376757 ARHGEF11O15085 1522 aa21.37■■□□□ 1.01
SSH3-203ENST00000376757 PKD2Q13563 968 aa21.36■■□□□ 1.01
SSH3-203ENST00000376757 RPRD2Q5VT52 1461 aaKnown RBP21.36■■□□□ 1.01
SSH3-203ENST00000376757 TCOF1Q13428 1488 aaKnown RBP21.35■■□□□ 1.01
SSH3-203ENST00000376757 NUDCQ9Y266 331 aa21.35■■□□□ 1.01
SSH3-203ENST00000376757 DAPK1P53355 1430 aa21.35■■□□□ 1.01
SSH3-203ENST00000376757 ABCA5Q8WWZ7 1642 aa21.35■■□□□ 1.01
SSH3-203ENST00000376757 GCC2Q8IWJ2 1684 aa21.35■■□□□ 1.01
SSH3-203ENST00000376757 ABCC5O15440 1437 aa21.34■■□□□ 1.01
SSH3-203ENST00000376757 TEX14Q8IWB6 1497 aa21.34■■□□□ 1.01
SSH3-203ENST00000376757 USP47Q96K76 1375 aa21.34■■□□□ 1.01
SSH3-203ENST00000376757 SPATA31E1Q6ZUB1 1445 aa21.32■■□□□ 1
SSH3-203ENST00000376757 CFDP1Q9UEE9 299 aaPredicted RBP21.32■■□□□ 1
SSH3-203ENST00000376757 DHX29Q7Z478 1369 aaKnown RBP21.3■■□□□ 1
SSH3-203ENST00000376757 SKAP1Q86WV1 359 aa21.3■■□□□ 1
SSH3-203ENST00000376757 CARD11Q9BXL7 1154 aa21.29■■□□□ 1
SSH3-203ENST00000376757 FBLN2P98095 1184 aa21.28■■□□□ 1
SSH3-203ENST00000376757 MIA2Q96PC5 1412 aa21.27■□□□□ 0.99
SSH3-203ENST00000376757 ST20-MTHFSA0A0A6YYL1 179 aa21.26■□□□□ 0.99
SSH3-203ENST00000376757 ANP32AP39687 249 aaKnown RBP21.26■□□□□ 0.99
SSH3-203ENST00000376757 PNISRQ8TF01 805 aaKnown RBP21.26■□□□□ 0.99
SSH3-203ENST00000376757 PRG4Q92954 1404 aaPredicted RBP21.26■□□□□ 0.99
SSH3-203ENST00000376757 EXOC6Q8TAG9 804 aa21.24■□□□□ 0.99
SSH3-203ENST00000376757 SMG6Q86US8 1419 aaKnown RBP21.24■□□□□ 0.99
SSH3-203ENST00000376757 IQGAP2Q13576 1575 aa21.24■□□□□ 0.99
SSH3-203ENST00000376757 BCORL1Q5H9F3 1711 aa21.22■□□□□ 0.99
SSH3-203ENST00000376757 DCAF11Q8TEB1 546 aa21.22■□□□□ 0.99
SSH3-203ENST00000376757 ZBTB47Q9UFB7 747 aaPredicted RBP21.21■□□□□ 0.99
SSH3-203ENST00000376757 LAS1LQ9Y4W2 734 aaKnown RBP21.21■□□□□ 0.99
SSH3-203ENST00000376757 WDR62O43379 1518 aa21.2■□□□□ 0.98
SSH3-203ENST00000376757 PLIN1O60240 522 aa21.2■□□□□ 0.98
SSH3-203ENST00000376757 PZPP20742 1482 aa21.19■□□□□ 0.98
SSH3-203ENST00000376757 RGL3Q3MIN7 710 aa21.19■□□□□ 0.98
SSH3-203ENST00000376757 IPO9Q96P70 1041 aaKnown RBP21.19■□□□□ 0.98
SSH3-203ENST00000376757 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
SSH3-203ENST00000376757 CDCA7LQ96GN5 454 aa21.18■□□□□ 0.98
SSH3-203ENST00000376757 NUP155O75694 1391 aa21.16■□□□□ 0.98
SSH3-203ENST00000376757 ROCK1Q13464 1354 aa21.16■□□□□ 0.98
SSH3-203ENST00000376757 ZNF608Q9ULD9 1512 aaPredicted RBP21.15■□□□□ 0.98
SSH3-203ENST00000376757 NUP153P49790 1475 aaKnown RBP21.15■□□□□ 0.98
SSH3-203ENST00000376757 RTL5Q5HYW3 569 aaPredicted RBP21.14■□□□□ 0.97
SSH3-203ENST00000376757 CC2D1BQ5T0F9 858 aaKnown RBP21.14■□□□□ 0.97
SSH3-203ENST00000376757 TARBP1Q13395 1621 aaKnown RBP21.12■□□□□ 0.97
SSH3-203ENST00000376757 RTN4Q9NQC3 1192 aaKnown RBP21.12■□□□□ 0.97
SSH3-203ENST00000376757 RRP1P56182 461 aaKnown RBP21.11■□□□□ 0.97
SSH3-203ENST00000376757 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
SSH3-203ENST00000376757 KIAA1107Q9UPP5 1409 aa21.11■□□□□ 0.97
SSH3-203ENST00000376757 RNF123Q5XPI4 1314 aa21.1■□□□□ 0.97
SSH3-203ENST00000376757 CAMSAP2Q08AD1 1489 aa21.1■□□□□ 0.97
SSH3-203ENST00000376757 RCAN3Q9UKA8 241 aa21.1■□□□□ 0.97
SSH3-203ENST00000376757 PLB1Q6P1J6 1458 aa21.09■□□□□ 0.97
SSH3-203ENST00000376757 HNRNPMP52272 730 aaKnown RBP eCLIP21.09■□□□□ 0.97
SSH3-203ENST00000376757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.08■□□□□ 0.97
SSH3-203ENST00000376757 NBPF1Q3BBV0 1214 aa21.07■□□□□ 0.96
SSH3-203ENST00000376757 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
SSH3-203ENST00000376757 ANKRD50Q9ULJ7 1429 aa21.06■□□□□ 0.96
SSH3-203ENST00000376757 DISP1Q96F81 1524 aa21.05■□□□□ 0.96
SSH3-203ENST00000376757 MYBBP1AQ9BQG0 1328 aaKnown RBP21.04■□□□□ 0.96
SSH3-203ENST00000376757 KIF15Q9NS87 1388 aa21.04■□□□□ 0.96
SSH3-203ENST00000376757 ADAMTS12P58397 1594 aa21.04■□□□□ 0.96
SSH3-203ENST00000376757 PDE4AP27815 886 aa21.03■□□□□ 0.96
SSH3-203ENST00000376757 ROCK2O75116 1388 aaKnown RBP21.03■□□□□ 0.96
SSH3-203ENST00000376757 CHMP7Q8WUX9 453 aaPredicted RBP21.03■□□□□ 0.96
SSH3-203ENST00000376757 ANKRD30AQ9BXX3 1397 aa21.02■□□□□ 0.96
SSH3-203ENST00000376757 MBD5Q9P267 1494 aa21.02■□□□□ 0.96
SSH3-203ENST00000376757 IL27Q8NEV9 243 aa21.02■□□□□ 0.96
SSH3-203ENST00000376757 GPATCH8Q9UKJ3 1502 aaKnown RBP21.02■□□□□ 0.95
SSH3-203ENST00000376757 SLC4A3P48751 1232 aa21.01■□□□□ 0.95
SSH3-203ENST00000376757 KIF14Q15058 1648 aa21.01■□□□□ 0.95
SSH3-203ENST00000376757 KDM5CP41229 1560 aa21.01■□□□□ 0.95
SSH3-203ENST00000376757 TSPY4P0CV99 314 aa21■□□□□ 0.95
SSH3-203ENST00000376757 TSPY10P0CW01 314 aa21■□□□□ 0.95
SSH3-203ENST00000376757 MYT1LQ9UL68 1186 aa21■□□□□ 0.95
SSH3-203ENST00000376757 NEFMP07197 916 aa21■□□□□ 0.95
SSH3-203ENST00000376757 TROQ12816 1431 aaPredicted RBP20.99■□□□□ 0.95
SSH3-203ENST00000376757 POLR1AO95602 1720 aaPredicted RBP20.98■□□□□ 0.95
SSH3-203ENST00000376757 C20orf194Q5TEA3 1177 aa20.97■□□□□ 0.95
SSH3-203ENST00000376757 KIAA0556O60303 1618 aa20.97■□□□□ 0.95
SSH3-203ENST00000376757 CRBNQ96SW2 442 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms