RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 WDR43Q15061 677 aaKnown RBP eCLIP16.65■□□□□ 0.26
DDR1-224ENST00000376567 WDR97A6NE52 1622 aa16.65■□□□□ 0.26
DDR1-224ENST00000376567 CDK13Q14004 1512 aaKnown RBP16.65■□□□□ 0.26
DDR1-224ENST00000376567 ANKRD30AQ9BXX3 1397 aa16.65■□□□□ 0.26
DDR1-224ENST00000376567 NBPF8Q3BBV2 869 aa16.65■□□□□ 0.26
DDR1-224ENST00000376567 CCDC184Q52MB2 194 aa16.65■□□□□ 0.26
DDR1-224ENST00000376567 PRG4Q92954 1404 aaPredicted RBP16.64■□□□□ 0.25
DDR1-224ENST00000376567 WASHC2AQ641Q2 1341 aa16.64■□□□□ 0.25
DDR1-224ENST00000376567 ABCA10Q8WWZ4 1543 aa16.63■□□□□ 0.25
DDR1-224ENST00000376567 FYCO1Q9BQS8 1478 aa16.62■□□□□ 0.25
DDR1-224ENST00000376567 PTPRGP23470 1445 aa16.62■□□□□ 0.25
DDR1-224ENST00000376567 UACAQ9BZF9 1416 aa16.62■□□□□ 0.25
DDR1-224ENST00000376567 NBR1Q14596 966 aa16.61■□□□□ 0.25
DDR1-224ENST00000376567 TSHZ2Q9NRE2 1034 aa16.61■□□□□ 0.25
DDR1-224ENST00000376567 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
DDR1-224ENST00000376567 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
DDR1-224ENST00000376567 KIF3BO15066 747 aa16.6■□□□□ 0.25
DDR1-224ENST00000376567 KNSTRNQ9Y448 316 aa16.6■□□□□ 0.25
DDR1-224ENST00000376567 PRKRIP1Q9H875 184 aaPredicted RBP16.6■□□□□ 0.25
DDR1-224ENST00000376567 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
DDR1-224ENST00000376567 SLC24A1O60721 1099 aa16.59■□□□□ 0.25
DDR1-224ENST00000376567 ROCK2O75116 1388 aaKnown RBP16.59■□□□□ 0.25
DDR1-224ENST00000376567 MLECQ14165 292 aa16.58■□□□□ 0.24
DDR1-224ENST00000376567 KIF21AQ7Z4S6 1674 aa16.57■□□□□ 0.24
DDR1-224ENST00000376567 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
DDR1-224ENST00000376567 EFCAB2Q5VUJ9 269 aa16.56■□□□□ 0.24
DDR1-224ENST00000376567 PTPRKQ15262 1439 aa16.56■□□□□ 0.24
DDR1-224ENST00000376567 SNAPC4Q5SXM2 1469 aa16.55■□□□□ 0.24
DDR1-224ENST00000376567 NAIPQ13075 1403 aa16.55■□□□□ 0.24
DDR1-224ENST00000376567 RTL5Q5HYW3 569 aaPredicted RBP16.54■□□□□ 0.24
DDR1-224ENST00000376567 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
DDR1-224ENST00000376567 ESF1Q9H501 851 aaKnown RBP16.54■□□□□ 0.24
DDR1-224ENST00000376567 PPM1GO15355 546 aaPredicted RBP16.53■□□□□ 0.24
DDR1-224ENST00000376567 RBM19Q9Y4C8 960 aaKnown RBP16.53■□□□□ 0.24
DDR1-224ENST00000376567 AFAP1Q8N556 730 aa16.53■□□□□ 0.24
DDR1-224ENST00000376567 ANP32AP39687 249 aaKnown RBP16.52■□□□□ 0.24
DDR1-224ENST00000376567 STK26Q9P289 416 aa16.52■□□□□ 0.24
DDR1-224ENST00000376567 USP47Q96K76 1375 aa16.51■□□□□ 0.23
DDR1-224ENST00000376567 PPP4R2Q9NY27 417 aa16.5■□□□□ 0.23
DDR1-224ENST00000376567 TMF1P82094 1093 aa16.5■□□□□ 0.23
DDR1-224ENST00000376567 HFM1A2PYH4 1435 aa16.5■□□□□ 0.23
DDR1-224ENST00000376567 PLB1Q6P1J6 1458 aa16.5■□□□□ 0.23
DDR1-224ENST00000376567 SPAG9O60271 1321 aaKnown RBP16.49■□□□□ 0.23
DDR1-224ENST00000376567 NBPF1Q3BBV0 1214 aa16.49■□□□□ 0.23
DDR1-224ENST00000376567 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
DDR1-224ENST00000376567 KIF15Q9NS87 1388 aa16.48■□□□□ 0.23
DDR1-224ENST00000376567 EPRSP07814 1512 aaKnown RBP16.48■□□□□ 0.23
DDR1-224ENST00000376567 EFCAB5A4FU69 1503 aa16.47■□□□□ 0.23
DDR1-224ENST00000376567 ANKRD50Q9ULJ7 1429 aa16.46■□□□□ 0.23
DDR1-224ENST00000376567 CCDC7Q96M83 1385 aa16.45■□□□□ 0.22
DDR1-224ENST00000376567 PANK3Q9H999 370 aa16.45■□□□□ 0.22
DDR1-224ENST00000376567 CCDC146Q8IYE0 955 aa16.44■□□□□ 0.22
DDR1-224ENST00000376567 PLIN1O60240 522 aa16.42■□□□□ 0.22
DDR1-224ENST00000376567 MAPKBP1O60336 1514 aa16.42■□□□□ 0.22
DDR1-224ENST00000376567 TRAK1Q9UPV9 953 aa16.42■□□□□ 0.22
DDR1-224ENST00000376567 FRAT1Q92837 279 aaPredicted RBP16.41■□□□□ 0.22
DDR1-224ENST00000376567 CCDC144AA2RUR9 1427 aa16.41■□□□□ 0.22
DDR1-224ENST00000376567 ARID4BQ4LE39 1312 aaPredicted RBP16.4■□□□□ 0.22
DDR1-224ENST00000376567 RGS3P49796 1198 aa16.4■□□□□ 0.22
DDR1-224ENST00000376567 NEFMP07197 916 aa16.39■□□□□ 0.21
DDR1-224ENST00000376567 SOX12O15370 315 aa16.38■□□□□ 0.21
DDR1-224ENST00000376567 CYB5RLQ6IPT4 315 aa16.38■□□□□ 0.21
DDR1-224ENST00000376567 DAPK1P53355 1430 aa16.38■□□□□ 0.21
DDR1-224ENST00000376567 KTN1Q86UP2 1357 aaKnown RBP16.38■□□□□ 0.21
DDR1-224ENST00000376567 U2SURPO15042 1029 aaKnown RBP16.37■□□□□ 0.21
DDR1-224ENST00000376567 EHBP1L1Q8N3D4 1523 aa16.37■□□□□ 0.21
DDR1-224ENST00000376567 IQGAP2Q13576 1575 aa16.37■□□□□ 0.21
DDR1-224ENST00000376567 POGKQ9P215 609 aa16.37■□□□□ 0.21
DDR1-224ENST00000376567 ZBTB47Q9UFB7 747 aaPredicted RBP16.36■□□□□ 0.21
DDR1-224ENST00000376567 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
DDR1-224ENST00000376567 WDR62O43379 1518 aa16.36■□□□□ 0.21
DDR1-224ENST00000376567 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
DDR1-224ENST00000376567 CUL7Q14999 1698 aa16.35■□□□□ 0.21
DDR1-224ENST00000376567 SRPK2P78362 688 aaKnown RBP16.35■□□□□ 0.21
DDR1-224ENST00000376567 THOC2Q8NI27 1593 aaKnown RBP16.35■□□□□ 0.21
DDR1-224ENST00000376567 KIAA0586Q9BVV6 1533 aa16.35■□□□□ 0.21
DDR1-224ENST00000376567 ABCC5O15440 1437 aa16.34■□□□□ 0.21
DDR1-224ENST00000376567 CDCA8Q53HL2 280 aa16.34■□□□□ 0.21
DDR1-224ENST00000376567 LAS1LQ9Y4W2 734 aaKnown RBP16.34■□□□□ 0.21
DDR1-224ENST00000376567 ANP32EQ9BTT0 268 aa16.34■□□□□ 0.21
DDR1-224ENST00000376567 RCAN3Q9UKA8 241 aa16.34■□□□□ 0.21
DDR1-224ENST00000376567 NUDCQ9Y266 331 aa16.33■□□□□ 0.21
DDR1-224ENST00000376567 KANK1Q14678 1352 aa16.33■□□□□ 0.2
DDR1-224ENST00000376567 RRP7AQ9Y3A4 280 aaKnown RBP16.33■□□□□ 0.2
DDR1-224ENST00000376567 SUPT6HQ7KZ85 1726 aaKnown RBP16.32■□□□□ 0.2
DDR1-224ENST00000376567 NLRP13Q86W25 1043 aa16.32■□□□□ 0.2
DDR1-224ENST00000376567 WASHC2CQ9Y4E1 1318 aa16.32■□□□□ 0.2
DDR1-224ENST00000376567 RSPH4AQ5TD94 716 aa16.32■□□□□ 0.2
DDR1-224ENST00000376567 PTPN23Q9H3S7 1636 aa16.31■□□□□ 0.2
DDR1-224ENST00000376567 MORC1Q86VD1 984 aa16.31■□□□□ 0.2
DDR1-224ENST00000376567 TARBP1Q13395 1621 aaKnown RBP16.31■□□□□ 0.2
DDR1-224ENST00000376567 C9orf84Q5VXU9 1444 aa16.31■□□□□ 0.2
DDR1-224ENST00000376567 CNTLNQ9NXG0 1405 aa16.31■□□□□ 0.2
DDR1-224ENST00000376567 TMEM132EQ6IEE7 984 aa16.3■□□□□ 0.2
DDR1-224ENST00000376567 MIA2Q96PC5 1412 aa16.3■□□□□ 0.2
DDR1-224ENST00000376567 CDCA7LQ96GN5 454 aa16.3■□□□□ 0.2
DDR1-224ENST00000376567 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
DDR1-224ENST00000376567 NUTM2FA1L443 756 aa16.3■□□□□ 0.2
DDR1-224ENST00000376567 ZBTB7CA1YPR0 619 aa16.3■□□□□ 0.2
DDR1-224ENST00000376567 RALBP1Q15311 655 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms