RNA–Protein interactions for RNA: ENST00000375779.6

CLIC1-206, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIC1, Length 1,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-206ENST00000375779 POGZQ7Z3K3 1410 aa23.89■■□□□ 1.41
CLIC1-206ENST00000375779 MYO5CQ9NQX4 1742 aa23.88■■□□□ 1.41
CLIC1-206ENST00000375779 HECW2Q9P2P5 1572 aa23.88■■□□□ 1.41
CLIC1-206ENST00000375779 YEATS2Q9ULM3 1422 aa23.88■■□□□ 1.41
CLIC1-206ENST00000375779 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
CLIC1-206ENST00000375779 CLIP1P30622 1438 aa23.85■■□□□ 1.41
CLIC1-206ENST00000375779 PCF11O94913 1555 aaKnown RBP23.83■■□□□ 1.41
CLIC1-206ENST00000375779 FYCO1Q9BQS8 1478 aa23.83■■□□□ 1.41
CLIC1-206ENST00000375779 ZFYVE16Q7Z3T8 1539 aa23.83■■□□□ 1.41
CLIC1-206ENST00000375779 SIGLEC1Q9BZZ2 1709 aa23.82■■□□□ 1.4
CLIC1-206ENST00000375779 ARID4BQ4LE39 1312 aaPredicted RBP23.82■■□□□ 1.4
CLIC1-206ENST00000375779 CDC42BPBQ9Y5S2 1711 aa23.81■■□□□ 1.4
CLIC1-206ENST00000375779 ATP10AO60312 1499 aa23.8■■□□□ 1.4
CLIC1-206ENST00000375779 MADDQ8WXG6 1647 aa23.79■■□□□ 1.4
CLIC1-206ENST00000375779 KDM5CP41229 1560 aa23.78■■□□□ 1.4
CLIC1-206ENST00000375779 AFAP1Q8N556 730 aa23.78■■□□□ 1.4
CLIC1-206ENST00000375779 ZNF518AQ6AHZ1 1483 aa23.78■■□□□ 1.4
CLIC1-206ENST00000375779 ARHGAP5Q13017 1502 aa23.75■■□□□ 1.39
CLIC1-206ENST00000375779 MLH3Q9UHC1 1453 aa23.74■■□□□ 1.39
CLIC1-206ENST00000375779 ARHGEF12Q9NZN5 1544 aa23.74■■□□□ 1.39
CLIC1-206ENST00000375779 PREX2Q70Z35 1606 aa23.73■■□□□ 1.39
CLIC1-206ENST00000375779 C9orf84Q5VXU9 1444 aa23.71■■□□□ 1.39
CLIC1-206ENST00000375779 CDC42BPAQ5VT25 1732 aa23.7■■□□□ 1.38
CLIC1-206ENST00000375779 GPATCH8Q9UKJ3 1502 aaKnown RBP23.69■■□□□ 1.38
CLIC1-206ENST00000375779 TRAPPC8Q9Y2L5 1435 aa23.68■■□□□ 1.38
CLIC1-206ENST00000375779 REREQ9P2R6 1566 aa23.68■■□□□ 1.38
CLIC1-206ENST00000375779 ABCC1P33527 1531 aa23.67■■□□□ 1.38
CLIC1-206ENST00000375779 RIMS1Q86UR5 1692 aaKnown RBP23.67■■□□□ 1.38
CLIC1-206ENST00000375779 LMTK3Q96Q04 1460 aa23.66■■□□□ 1.38
CLIC1-206ENST00000375779 DIP2CQ9Y2E4 1556 aa23.63■■□□□ 1.37
CLIC1-206ENST00000375779 KIAA1107Q9UPP5 1409 aa23.62■■□□□ 1.37
CLIC1-206ENST00000375779 ITSN2Q9NZM3 1697 aa23.61■■□□□ 1.37
CLIC1-206ENST00000375779 AGLP35573 1532 aa23.61■■□□□ 1.37
CLIC1-206ENST00000375779 CEP162Q5TB80 1403 aa23.6■■□□□ 1.37
CLIC1-206ENST00000375779 MLECQ14165 292 aa23.6■■□□□ 1.37
CLIC1-206ENST00000375779 ILDR1Q86SU0 546 aaPredicted RBP23.6■■□□□ 1.37
CLIC1-206ENST00000375779 KIDINS220Q9ULH0 1771 aa23.59■■□□□ 1.37
CLIC1-206ENST00000375779 FER1L4A9Z1Z3 1794 aa23.57■■□□□ 1.36
CLIC1-206ENST00000375779 SAMD9LQ8IVG5 1584 aa23.57■■□□□ 1.36
CLIC1-206ENST00000375779 ABCA6Q8N139 1617 aa23.57■■□□□ 1.36
CLIC1-206ENST00000375779 SETD1BQ9UPS6 1966 aaKnown RBP23.57■■□□□ 1.36
CLIC1-206ENST00000375779 CFDP1Q9UEE9 299 aaPredicted RBP23.55■■□□□ 1.36
CLIC1-206ENST00000375779 MTUS2Q5JR59 1369 aa23.54■■□□□ 1.36
CLIC1-206ENST00000375779 HNRNPMP52272 730 aaKnown RBP eCLIP23.54■■□□□ 1.36
CLIC1-206ENST00000375779 CCNB3Q8WWL7 1395 aa23.52■■□□□ 1.36
CLIC1-206ENST00000375779 PLEKHH2Q8IVE3 1493 aa23.52■■□□□ 1.36
CLIC1-206ENST00000375779 CEBPAP49715 358 aaPredicted RBP23.5■■□□□ 1.35
CLIC1-206ENST00000375779 ZNF777Q9ULD5 760 aaPredicted RBP23.5■■□□□ 1.35
CLIC1-206ENST00000375779 LOC105371045A0A1W2PR82 267 aa23.49■■□□□ 1.35
CLIC1-206ENST00000375779 SYCP2Q9BX26 1530 aa23.49■■□□□ 1.35
CLIC1-206ENST00000375779 MBD5Q9P267 1494 aa23.48■■□□□ 1.35
CLIC1-206ENST00000375779 HSPA2P54652 639 aa23.47■■□□□ 1.35
CLIC1-206ENST00000375779 MYT1LQ9UL68 1186 aa23.47■■□□□ 1.35
CLIC1-206ENST00000375779 SPAG9O60271 1321 aaKnown RBP23.47■■□□□ 1.35
CLIC1-206ENST00000375779 EHBP1L1Q8N3D4 1523 aa23.47■■□□□ 1.35
CLIC1-206ENST00000375779 TIAM1Q13009 1591 aa23.46■■□□□ 1.35
CLIC1-206ENST00000375779 ZNF644Q9H582 1327 aaPredicted RBP23.45■■□□□ 1.34
CLIC1-206ENST00000375779 INO80Q9ULG1 1556 aaPredicted RBP23.41■■□□□ 1.34
CLIC1-206ENST00000375779 ATP7AQ04656 1500 aa23.41■■□□□ 1.34
CLIC1-206ENST00000375779 RTEL1-TNFRSF6BF6WH68 1400 aa23.41■■□□□ 1.34
CLIC1-206ENST00000375779 PLXNC1O60486 1568 aa23.4■■□□□ 1.34
CLIC1-206ENST00000375779 PREX1Q8TCU6 1659 aa23.4■■□□□ 1.34
CLIC1-206ENST00000375779 CNTLNQ9NXG0 1405 aa23.4■■□□□ 1.34
CLIC1-206ENST00000375779 RSPH4AQ5TD94 716 aa23.39■■□□□ 1.33
CLIC1-206ENST00000375779 PLPPR3Q6T4P5 718 aa23.39■■□□□ 1.33
CLIC1-206ENST00000375779 C3P01024 1663 aa23.38■■□□□ 1.33
CLIC1-206ENST00000375779 PPP6R1Q9UPN7 881 aa23.38■■□□□ 1.33
CLIC1-206ENST00000375779 VPS8Q8N3P4 1428 aa23.38■■□□□ 1.33
CLIC1-206ENST00000375779 FBXO41Q8TF61 875 aa23.37■■□□□ 1.33
CLIC1-206ENST00000375779 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
CLIC1-206ENST00000375779 MAP3K1Q13233 1512 aa23.36■■□□□ 1.33
CLIC1-206ENST00000375779 A2MP01023 1474 aa23.36■■□□□ 1.33
CLIC1-206ENST00000375779 ZMYM3Q14202 1370 aa23.34■■□□□ 1.33
CLIC1-206ENST00000375779 SUPT6HQ7KZ85 1726 aaKnown RBP23.33■■□□□ 1.32
CLIC1-206ENST00000375779 UHRF1BP1Q6BDS2 1440 aa23.33■■□□□ 1.32
CLIC1-206ENST00000375779 MROH2AA6NES4 1674 aa23.32■■□□□ 1.32
CLIC1-206ENST00000375779 LRRC9Q6ZRR7 1453 aa23.32■■□□□ 1.32
CLIC1-206ENST00000375779 NPATQ14207 1427 aa23.32■■□□□ 1.32
CLIC1-206ENST00000375779 DHX29Q7Z478 1369 aaKnown RBP23.31■■□□□ 1.32
CLIC1-206ENST00000375779 ESF1Q9H501 851 aaKnown RBP23.31■■□□□ 1.32
CLIC1-206ENST00000375779 STRCQ7RTU9 1775 aa23.31■■□□□ 1.32
CLIC1-206ENST00000375779 ADGBQ8N7X0 1667 aa23.29■■□□□ 1.32
CLIC1-206ENST00000375779 DMRT2Q9Y5R5 561 aa23.28■■□□□ 1.32
CLIC1-206ENST00000375779 KANK4Q5T7N3 995 aaPredicted RBP23.27■■□□□ 1.32
CLIC1-206ENST00000375779 CCDC141Q6ZP82 1450 aa23.25■■□□□ 1.31
CLIC1-206ENST00000375779 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
CLIC1-206ENST00000375779 ARHGEF5Q12774 1597 aa23.24■■□□□ 1.31
CLIC1-206ENST00000375779 GGT6Q6P531 493 aa23.23■■□□□ 1.31
CLIC1-206ENST00000375779 PTPRTO14522 1441 aa23.22■■□□□ 1.31
CLIC1-206ENST00000375779 PTPRKQ15262 1439 aa23.22■■□□□ 1.31
CLIC1-206ENST00000375779 MIA2Q96PC5 1412 aa23.2■■□□□ 1.3
CLIC1-206ENST00000375779 CERKQ8TCT0 537 aa23.2■■□□□ 1.3
CLIC1-206ENST00000375779 CLTCQ00610 1675 aaKnown RBP23.18■■□□□ 1.3
CLIC1-206ENST00000375779 TSPY4P0CV99 314 aa23.17■■□□□ 1.3
CLIC1-206ENST00000375779 TSPY10P0CW01 314 aa23.17■■□□□ 1.3
CLIC1-206ENST00000375779 NCOA1Q15788 1441 aa23.16■■□□□ 1.3
CLIC1-206ENST00000375779 FAM135AQ9P2D6 1515 aa23.15■■□□□ 1.3
CLIC1-206ENST00000375779 MYOM3Q5VTT5 1437 aa23.15■■□□□ 1.3
CLIC1-206ENST00000375779 KIF3BO15066 747 aa23.14■■□□□ 1.29
CLIC1-206ENST00000375779 MAST1Q9Y2H9 1570 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms