RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 ARHGAP5Q13017 1502 aa25.03■■□□□ 1.6
HDHD3-202ENST00000374180 RAPGEF3O95398 923 aa25.02■■□□□ 1.6
HDHD3-202ENST00000374180 GPATCH8Q9UKJ3 1502 aaKnown RBP25■■□□□ 1.59
HDHD3-202ENST00000374180 CFDP1Q9UEE9 299 aaPredicted RBP24.98■■□□□ 1.59
HDHD3-202ENST00000374180 ZNF777Q9ULD5 760 aaPredicted RBP24.97■■□□□ 1.59
HDHD3-202ENST00000374180 DENND4BO75064 1496 aaPredicted RBP24.97■■□□□ 1.59
HDHD3-202ENST00000374180 ADGRL1O94910 1474 aa24.97■■□□□ 1.59
HDHD3-202ENST00000374180 SCAPERQ9BY12 1400 aa24.97■■□□□ 1.59
HDHD3-202ENST00000374180 PREX2Q70Z35 1606 aa24.97■■□□□ 1.59
HDHD3-202ENST00000374180 NCOA2Q15596 1464 aa24.96■■□□□ 1.59
HDHD3-202ENST00000374180 CDC42BPBQ9Y5S2 1711 aa24.96■■□□□ 1.59
HDHD3-202ENST00000374180 CDC42BPAQ5VT25 1732 aa24.96■■□□□ 1.59
HDHD3-202ENST00000374180 SUPT6HQ7KZ85 1726 aaKnown RBP24.96■■□□□ 1.59
HDHD3-202ENST00000374180 AFAP1Q8N556 730 aa24.86■■□□□ 1.57
HDHD3-202ENST00000374180 POGZQ7Z3K3 1410 aa24.86■■□□□ 1.57
HDHD3-202ENST00000374180 FRMPD1Q5SYB0 1578 aa24.86■■□□□ 1.57
HDHD3-202ENST00000374180 RICTORQ6R327 1708 aa24.84■■□□□ 1.57
HDHD3-202ENST00000374180 ITSN2Q9NZM3 1697 aa24.84■■□□□ 1.57
HDHD3-202ENST00000374180 ZNF644Q9H582 1327 aaPredicted RBP24.84■■□□□ 1.57
HDHD3-202ENST00000374180 HNRNPMP52272 730 aaKnown RBP eCLIP24.83■■□□□ 1.57
HDHD3-202ENST00000374180 ABCC1P33527 1531 aa24.82■■□□□ 1.56
HDHD3-202ENST00000374180 ZNF518AQ6AHZ1 1483 aa24.82■■□□□ 1.56
HDHD3-202ENST00000374180 SAMD9LQ8IVG5 1584 aa24.82■■□□□ 1.56
HDHD3-202ENST00000374180 ARHGEF12Q9NZN5 1544 aa24.82■■□□□ 1.56
HDHD3-202ENST00000374180 PLEKHH2Q8IVE3 1493 aa24.81■■□□□ 1.56
HDHD3-202ENST00000374180 KIAA1107Q9UPP5 1409 aa24.8■■□□□ 1.56
HDHD3-202ENST00000374180 TRAPPC8Q9Y2L5 1435 aa24.8■■□□□ 1.56
HDHD3-202ENST00000374180 MYT1LQ9UL68 1186 aa24.79■■□□□ 1.56
HDHD3-202ENST00000374180 MYOM3Q5VTT5 1437 aa24.78■■□□□ 1.56
HDHD3-202ENST00000374180 ZMYM4Q5VZL5 1548 aa24.77■■□□□ 1.56
HDHD3-202ENST00000374180 MAGI2Q86UL8 1455 aa24.77■■□□□ 1.56
HDHD3-202ENST00000374180 SYCP2Q9BX26 1530 aa24.77■■□□□ 1.56
HDHD3-202ENST00000374180 PPARGC1BQ86YN6 1023 aaKnown RBP24.75■■□□□ 1.55
HDHD3-202ENST00000374180 MIA2Q96PC5 1412 aa24.74■■□□□ 1.55
HDHD3-202ENST00000374180 YEATS2Q9ULM3 1422 aa24.73■■□□□ 1.55
HDHD3-202ENST00000374180 CAMSAP2Q08AD1 1489 aa24.72■■□□□ 1.55
HDHD3-202ENST00000374180 KDM5CP41229 1560 aa24.72■■□□□ 1.55
HDHD3-202ENST00000374180 ZFYVE16Q7Z3T8 1539 aa24.72■■□□□ 1.55
HDHD3-202ENST00000374180 SPAG9O60271 1321 aaKnown RBP24.71■■□□□ 1.55
HDHD3-202ENST00000374180 RSPH4AQ5TD94 716 aa24.7■■□□□ 1.55
HDHD3-202ENST00000374180 MBD5Q9P267 1494 aa24.69■■□□□ 1.54
HDHD3-202ENST00000374180 MLH3Q9UHC1 1453 aa24.69■■□□□ 1.54
HDHD3-202ENST00000374180 ARHGEF40Q8TER5 1519 aa24.68■■□□□ 1.54
HDHD3-202ENST00000374180 ARID4BQ4LE39 1312 aaPredicted RBP24.67■■□□□ 1.54
HDHD3-202ENST00000374180 HECW2Q9P2P5 1572 aa24.66■■□□□ 1.54
HDHD3-202ENST00000374180 FGD6Q6ZV73 1430 aa24.66■■□□□ 1.54
HDHD3-202ENST00000374180 ATP10AO60312 1499 aa24.65■■□□□ 1.54
HDHD3-202ENST00000374180 KDM4FA0A1W2PPD8 638 aa24.63■■□□□ 1.53
HDHD3-202ENST00000374180 TSPY4P0CV99 314 aa24.63■■□□□ 1.53
HDHD3-202ENST00000374180 TSPY10P0CW01 314 aa24.63■■□□□ 1.53
HDHD3-202ENST00000374180 CCDC141Q6ZP82 1450 aa24.62■■□□□ 1.53
HDHD3-202ENST00000374180 C9orf84Q5VXU9 1444 aa24.59■■□□□ 1.53
HDHD3-202ENST00000374180 PTPN23Q9H3S7 1636 aa24.59■■□□□ 1.53
HDHD3-202ENST00000374180 KIDINS220Q9ULH0 1771 aa24.59■■□□□ 1.53
HDHD3-202ENST00000374180 ARHGEF5Q12774 1597 aa24.58■■□□□ 1.53
HDHD3-202ENST00000374180 FAM50AQ14320 339 aaKnown RBP24.58■■□□□ 1.52
HDHD3-202ENST00000374180 ATP7AQ04656 1500 aa24.57■■□□□ 1.52
HDHD3-202ENST00000374180 DIP2CQ9Y2E4 1556 aa24.57■■□□□ 1.52
HDHD3-202ENST00000374180 RTEL1-TNFRSF6BF6WH68 1400 aa24.56■■□□□ 1.52
HDHD3-202ENST00000374180 TCOF1Q13428 1488 aaKnown RBP24.56■■□□□ 1.52
HDHD3-202ENST00000374180 ABCA6Q8N139 1617 aa24.55■■□□□ 1.52
HDHD3-202ENST00000374180 INO80Q9ULG1 1556 aaPredicted RBP24.53■■□□□ 1.52
HDHD3-202ENST00000374180 AEBP2Q6ZN18 517 aaPredicted RBP24.53■■□□□ 1.52
HDHD3-202ENST00000374180 MLECQ14165 292 aa24.51■■□□□ 1.51
HDHD3-202ENST00000374180 ABCC5O15440 1437 aa24.49■■□□□ 1.51
HDHD3-202ENST00000374180 REREQ9P2R6 1566 aa24.48■■□□□ 1.51
HDHD3-202ENST00000374180 SIGLEC1Q9BZZ2 1709 aa24.48■■□□□ 1.51
HDHD3-202ENST00000374180 A2MP01023 1474 aa24.48■■□□□ 1.51
HDHD3-202ENST00000374180 DAPK1P53355 1430 aa24.47■■□□□ 1.51
HDHD3-202ENST00000374180 BCORL1Q5H9F3 1711 aa24.46■■□□□ 1.51
HDHD3-202ENST00000374180 AGLP35573 1532 aa24.44■■□□□ 1.5
HDHD3-202ENST00000374180 DHX29Q7Z478 1369 aaKnown RBP24.44■■□□□ 1.5
HDHD3-202ENST00000374180 CHIC2Q9UKJ5 165 aa24.44■■□□□ 1.5
HDHD3-202ENST00000374180 DNMT1P26358 1616 aaKnown RBP24.44■■□□□ 1.5
HDHD3-202ENST00000374180 MAST1Q9Y2H9 1570 aa24.44■■□□□ 1.5
HDHD3-202ENST00000374180 ADGBQ8N7X0 1667 aa24.42■■□□□ 1.5
HDHD3-202ENST00000374180 ADAMTSL3P82987 1691 aa24.41■■□□□ 1.5
HDHD3-202ENST00000374180 SHANK2Q9UPX8 1470 aa24.41■■□□□ 1.5
HDHD3-202ENST00000374180 RRP7BPQ9NSQ0 103 aa24.39■■□□□ 1.5
HDHD3-202ENST00000374180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.39■■□□□ 1.5
HDHD3-202ENST00000374180 PLXNC1O60486 1568 aa24.38■■□□□ 1.49
HDHD3-202ENST00000374180 ITGAEP38570 1179 aa24.37■■□□□ 1.49
HDHD3-202ENST00000374180 GGT6Q6P531 493 aa24.37■■□□□ 1.49
HDHD3-202ENST00000374180 CROCC2H7BZ55 1655 aa24.37■■□□□ 1.49
HDHD3-202ENST00000374180 RRBP1Q9P2E9 1410 aaKnown RBP24.36■■□□□ 1.49
HDHD3-202ENST00000374180 KIF3BO15066 747 aa24.36■■□□□ 1.49
HDHD3-202ENST00000374180 ESF1Q9H501 851 aaKnown RBP24.36■■□□□ 1.49
HDHD3-202ENST00000374180 ANKRD30AQ9BXX3 1397 aa24.36■■□□□ 1.49
HDHD3-202ENST00000374180 MADDQ8WXG6 1647 aa24.36■■□□□ 1.49
HDHD3-202ENST00000374180 KIF15Q9NS87 1388 aa24.35■■□□□ 1.49
HDHD3-202ENST00000374180 NCOA1Q15788 1441 aa24.32■■□□□ 1.48
HDHD3-202ENST00000374180 PTPRMP28827 1452 aa24.32■■□□□ 1.48
HDHD3-202ENST00000374180 PTPRKQ15262 1439 aa24.31■■□□□ 1.48
HDHD3-202ENST00000374180 DUOX2Q9NRD8 1548 aa24.3■■□□□ 1.48
HDHD3-202ENST00000374180 PLPPR3Q6T4P5 718 aa24.29■■□□□ 1.48
HDHD3-202ENST00000374180 PPP6R1Q9UPN7 881 aa24.29■■□□□ 1.48
HDHD3-202ENST00000374180 RIMS1Q86UR5 1692 aaKnown RBP24.29■■□□□ 1.48
HDHD3-202ENST00000374180 ADGRL2O95490 1459 aa24.28■■□□□ 1.48
HDHD3-202ENST00000374180 FER1L4A9Z1Z3 1794 aa24.28■■□□□ 1.48
HDHD3-202ENST00000374180 ERBINQ96RT1 1412 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms