RNA–Protein interactions for RNA: ENST00000374012.7

PHF20-203, Transcript of PHD finger protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF20, Length 5,922 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-203ENST00000374012 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
PHF20-203ENST00000374012 MCCP23508 829 aa16.26■□□□□ 0.19
PHF20-203ENST00000374012 PKD2Q13563 968 aa16.25■□□□□ 0.19
PHF20-203ENST00000374012 TOP2AP11388 1531 aaKnown RBP16.25■□□□□ 0.19
PHF20-203ENST00000374012 ROCK2O75116 1388 aaKnown RBP16.23■□□□□ 0.19
PHF20-203ENST00000374012 MROH2BQ7Z745 1585 aa16.23■□□□□ 0.19
PHF20-203ENST00000374012 STK26Q9P289 416 aa16.23■□□□□ 0.19
PHF20-203ENST00000374012 SENP3-EIF4A1A0A087X0R7 540 aa16.22■□□□□ 0.19
PHF20-203ENST00000374012 SAFB2Q14151 953 aaKnown RBP eCLIP16.22■□□□□ 0.19
PHF20-203ENST00000374012 TULP1O00294 542 aaPredicted RBP16.22■□□□□ 0.19
PHF20-203ENST00000374012 SOX12O15370 315 aa16.22■□□□□ 0.19
PHF20-203ENST00000374012 RGS3P49796 1198 aa16.22■□□□□ 0.19
PHF20-203ENST00000374012 CHMP4AQ9BY43 222 aa16.21■□□□□ 0.19
PHF20-203ENST00000374012 ABCC8Q09428 1581 aa16.21■□□□□ 0.19
PHF20-203ENST00000374012 NAP1L2Q9ULW6 460 aaPredicted RBP16.2■□□□□ 0.18
PHF20-203ENST00000374012 IPO8O15397 1037 aaKnown RBP16.2■□□□□ 0.18
PHF20-203ENST00000374012 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
PHF20-203ENST00000374012 PAK3O75914 559 aaPredicted RBP16.19■□□□□ 0.18
PHF20-203ENST00000374012 HSPA5P11021 654 aaKnown RBP16.19■□□□□ 0.18
PHF20-203ENST00000374012 RSPH4AQ5TD94 716 aa16.19■□□□□ 0.18
PHF20-203ENST00000374012 CSB-PGBD3P0DP91 1061 aa16.19■□□□□ 0.18
PHF20-203ENST00000374012 EID1Q9Y6B2 187 aa16.19■□□□□ 0.18
PHF20-203ENST00000374012 TPRNQ4KMQ1 711 aa16.18■□□□□ 0.18
PHF20-203ENST00000374012 CCDC18Q5T9S5 1454 aa16.18■□□□□ 0.18
PHF20-203ENST00000374012 NUP155O75694 1391 aa16.18■□□□□ 0.18
PHF20-203ENST00000374012 HSCBQ8IWL3 235 aa16.17■□□□□ 0.18
PHF20-203ENST00000374012 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
PHF20-203ENST00000374012 RAPGEF2Q9Y4G8 1499 aa16.17■□□□□ 0.18
PHF20-203ENST00000374012 RALBP1Q15311 655 aa16.16■□□□□ 0.18
PHF20-203ENST00000374012 NRDCO43847 1150 aa16.16■□□□□ 0.18
PHF20-203ENST00000374012 DNTTIP2Q5QJE6 756 aaKnown RBP16.15■□□□□ 0.18
PHF20-203ENST00000374012 TMX4Q9H1E5 349 aaPredicted RBP16.15■□□□□ 0.18
PHF20-203ENST00000374012 MPHOSPH9Q99550 1183 aa16.15■□□□□ 0.18
PHF20-203ENST00000374012 TAOK2Q9UL54 1235 aa16.14■□□□□ 0.17
PHF20-203ENST00000374012 GOLGA6L4A6NEF3 574 aa16.14■□□□□ 0.17
PHF20-203ENST00000374012 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
PHF20-203ENST00000374012 TERF2IPQ9NYB0 399 aa16.12■□□□□ 0.17
PHF20-203ENST00000374012 SPAG9O60271 1321 aaKnown RBP16.12■□□□□ 0.17
PHF20-203ENST00000374012 KIF3BO15066 747 aa16.1■□□□□ 0.17
PHF20-203ENST00000374012 HDAC5Q9UQL6 1122 aa16.09■□□□□ 0.17
PHF20-203ENST00000374012 KIAA1211Q6ZU35 1233 aa16.09■□□□□ 0.17
PHF20-203ENST00000374012 U2AF1L5P0DN76 240 aaPredicted RBP16.08■□□□□ 0.17
PHF20-203ENST00000374012 U2AF1Q01081 240 aaKnown RBP eCLIP16.08■□□□□ 0.17
PHF20-203ENST00000374012 WASHC2CQ9Y4E1 1318 aa16.08■□□□□ 0.16
PHF20-203ENST00000374012 WIZO95785 1651 aa16.08■□□□□ 0.16
PHF20-203ENST00000374012 PLCB2Q00722 1185 aa16.07■□□□□ 0.16
PHF20-203ENST00000374012 GNL2Q13823 731 aaKnown RBP16.07■□□□□ 0.16
PHF20-203ENST00000374012 UACAQ9BZF9 1416 aa16.07■□□□□ 0.16
PHF20-203ENST00000374012 RAB3GAP2Q9H2M9 1393 aa16.07■□□□□ 0.16
PHF20-203ENST00000374012 NOP58Q9Y2X3 529 aaKnown RBP16.07■□□□□ 0.16
PHF20-203ENST00000374012 KANK4Q5T7N3 995 aaPredicted RBP16.06■□□□□ 0.16
PHF20-203ENST00000374012 HNRNPMP52272 730 aaKnown RBP eCLIP16.06■□□□□ 0.167e-7■■■■□ 24.4
PHF20-203ENST00000374012 ISY1Q9ULR0 285 aaKnown RBP16.06■□□□□ 0.16
PHF20-203ENST00000374012 FOXD1Q16676 465 aa16.06■□□□□ 0.16
PHF20-203ENST00000374012 STK31Q9BXU1 1019 aa16.06■□□□□ 0.16
PHF20-203ENST00000374012 GPATCH3Q96I76 525 aa16.06■□□□□ 0.16
PHF20-203ENST00000374012 CCDC9Q9Y3X0 531 aaKnown RBP16.05■□□□□ 0.16
PHF20-203ENST00000374012 PTMSP20962 102 aa16.05■□□□□ 0.16
PHF20-203ENST00000374012 RWDD1Q9H446 243 aaPredicted RBP16.05■□□□□ 0.16
PHF20-203ENST00000374012 LMOD3Q0VAK6 560 aa16.05■□□□□ 0.16
PHF20-203ENST00000374012 ERICH6BQ5W0A0 696 aa16.04■□□□□ 0.16
PHF20-203ENST00000374012 FHOD3Q2V2M9 1422 aa16.03■□□□□ 0.16
PHF20-203ENST00000374012 ITPRIPQ8IWB1 547 aa16.03■□□□□ 0.16
PHF20-203ENST00000374012 CLSTN1O94985 981 aa16.02■□□□□ 0.16
PHF20-203ENST00000374012 NGDNQ8NEJ9 315 aaKnown RBP16.02■□□□□ 0.16
PHF20-203ENST00000374012 ZNF330Q9Y3S2 320 aaPredicted RBP16.01■□□□□ 0.15
PHF20-203ENST00000374012 PMFBP1Q8TBY8 1022 aa16.01■□□□□ 0.15
PHF20-203ENST00000374012 L1TD1Q5T7N2 865 aaKnown RBP16.01■□□□□ 0.15
PHF20-203ENST00000374012 B4GALNT3Q6L9W6 998 aa16■□□□□ 0.15
PHF20-203ENST00000374012 HTATSF1O43719 755 aaKnown RBP16■□□□□ 0.15
PHF20-203ENST00000374012 JPH4Q96JJ6 628 aa15.99■□□□□ 0.15
PHF20-203ENST00000374012 SMARCA4P51532 1647 aa15.99■□□□□ 0.15
PHF20-203ENST00000374012 TAF7LQ5H9L4 462 aa15.99■□□□□ 0.15
PHF20-203ENST00000374012 HMMRO75330 724 aa15.99■□□□□ 0.15
PHF20-203ENST00000374012 GORABQ5T7V8 394 aa15.99■□□□□ 0.15
PHF20-203ENST00000374012 PHLDB1Q86UU1 1377 aa15.98■□□□□ 0.15
PHF20-203ENST00000374012 RCAN3Q9UKA8 241 aa15.98■□□□□ 0.15
PHF20-203ENST00000374012 AMPHP49418 695 aa15.98■□□□□ 0.15
PHF20-203ENST00000374012 CHAF1AQ13111 956 aaPredicted RBP15.98■□□□□ 0.15
PHF20-203ENST00000374012 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
PHF20-203ENST00000374012 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
PHF20-203ENST00000374012 APBB1O00213 710 aa15.96■□□□□ 0.15
PHF20-203ENST00000374012 DRC7Q8IY82 874 aa15.95■□□□□ 0.14
PHF20-203ENST00000374012 CHMP3Q9Y3E7 222 aa15.95■□□□□ 0.14
PHF20-203ENST00000374012 CCDC144AA2RUR9 1427 aa15.95■□□□□ 0.14
PHF20-203ENST00000374012 G3V3G9 751 aa15.95■□□□□ 0.14
PHF20-203ENST00000374012 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
PHF20-203ENST00000374012 SMC4Q9NTJ3 1288 aa15.93■□□□□ 0.14
PHF20-203ENST00000374012 KIAA2012Q0VF49 1180 aa15.93■□□□□ 0.14
PHF20-203ENST00000374012 PTPRGP23470 1445 aa15.93■□□□□ 0.14
PHF20-203ENST00000374012 GBP4Q96PP9 640 aa15.93■□□□□ 0.14
PHF20-203ENST00000374012 KIF15Q9NS87 1388 aa15.92■□□□□ 0.14
PHF20-203ENST00000374012 NUTM2DQ5VT03 806 aaPredicted RBP15.92■□□□□ 0.14
PHF20-203ENST00000374012 NAP1L5Q96NT1 182 aaPredicted RBP15.92■□□□□ 0.14
PHF20-203ENST00000374012 VGFO15240 615 aaPredicted RBP15.9■□□□□ 0.14
PHF20-203ENST00000374012 MSNP26038 577 aaKnown RBP15.9■□□□□ 0.14
PHF20-203ENST00000374012 PDE3BQ13370 1112 aa15.9■□□□□ 0.14
PHF20-203ENST00000374012 TPM4P67936 248 aa15.89■□□□□ 0.13
PHF20-203ENST00000374012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.89■□□□□ 0.136e-7■■■□□ 18.6
PHF20-203ENST00000374012 CCDC34Q96HJ3 373 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms