RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 SIGLEC1Q9BZZ2 1709 aa26.48■■□□□ 1.83
HDAC8-202ENST00000373556 TROQ12816 1431 aaPredicted RBP26.46■■□□□ 1.83
HDAC8-202ENST00000373556 POGZQ7Z3K3 1410 aa26.46■■□□□ 1.83
HDAC8-202ENST00000373556 RIMS1Q86UR5 1692 aaKnown RBP26.45■■□□□ 1.82
HDAC8-202ENST00000373556 PCF11O94913 1555 aaKnown RBP26.44■■□□□ 1.82
HDAC8-202ENST00000373556 ILDR1Q86SU0 546 aaPredicted RBP26.43■■□□□ 1.82
HDAC8-202ENST00000373556 MAGI2Q86UL8 1455 aa26.42■■□□□ 1.82
HDAC8-202ENST00000373556 EFCAB2Q5VUJ9 269 aa26.42■■□□□ 1.82
HDAC8-202ENST00000373556 CLIP1P30622 1438 aa26.41■■□□□ 1.82
HDAC8-202ENST00000373556 ARHGAP5Q13017 1502 aa26.39■■□□□ 1.82
HDAC8-202ENST00000373556 CASKIN1Q8WXD9 1431 aa26.38■■□□□ 1.81
HDAC8-202ENST00000373556 CCDC18Q5T9S5 1454 aa26.35■■□□□ 1.81
HDAC8-202ENST00000373556 CDC42BPBQ9Y5S2 1711 aa26.34■■□□□ 1.81
HDAC8-202ENST00000373556 MLECQ14165 292 aa26.34■■□□□ 1.81
HDAC8-202ENST00000373556 PLPPR3Q6T4P5 718 aa26.33■■□□□ 1.81
HDAC8-202ENST00000373556 ATP10AO60312 1499 aa26.31■■□□□ 1.8
HDAC8-202ENST00000373556 FER1L4A9Z1Z3 1794 aa26.31■■□□□ 1.8
HDAC8-202ENST00000373556 ZNF518AQ6AHZ1 1483 aa26.3■■□□□ 1.8
HDAC8-202ENST00000373556 LMTK3Q96Q04 1460 aa26.3■■□□□ 1.8
HDAC8-202ENST00000373556 PREX2Q70Z35 1606 aa26.29■■□□□ 1.8
HDAC8-202ENST00000373556 AFAP1Q8N556 730 aa26.29■■□□□ 1.8
HDAC8-202ENST00000373556 C9orf84Q5VXU9 1444 aa26.29■■□□□ 1.8
HDAC8-202ENST00000373556 FYCO1Q9BQS8 1478 aa26.29■■□□□ 1.8
HDAC8-202ENST00000373556 KDM5CP41229 1560 aa26.28■■□□□ 1.8
HDAC8-202ENST00000373556 CDC42BPAQ5VT25 1732 aa26.23■■□□□ 1.79
HDAC8-202ENST00000373556 MYT1LQ9UL68 1186 aa26.23■■□□□ 1.79
HDAC8-202ENST00000373556 ARHGEF12Q9NZN5 1544 aa26.23■■□□□ 1.79
HDAC8-202ENST00000373556 ABCC1P33527 1531 aa26.22■■□□□ 1.79
HDAC8-202ENST00000373556 DIP2CQ9Y2E4 1556 aa26.21■■□□□ 1.79
HDAC8-202ENST00000373556 ITSN2Q9NZM3 1697 aa26.21■■□□□ 1.79
HDAC8-202ENST00000373556 ABCA6Q8N139 1617 aa26.19■■□□□ 1.78
HDAC8-202ENST00000373556 TRAPPC8Q9Y2L5 1435 aa26.19■■□□□ 1.78
HDAC8-202ENST00000373556 HSPA2P54652 639 aa26.18■■□□□ 1.78
HDAC8-202ENST00000373556 MLH3Q9UHC1 1453 aa26.16■■□□□ 1.78
HDAC8-202ENST00000373556 REREQ9P2R6 1566 aa26.12■■□□□ 1.77
HDAC8-202ENST00000373556 ZNF777Q9ULD5 760 aaPredicted RBP26.12■■□□□ 1.77
HDAC8-202ENST00000373556 CEBPAP49715 358 aaPredicted RBP26.11■■□□□ 1.77
HDAC8-202ENST00000373556 SAMD9LQ8IVG5 1584 aa26.11■■□□□ 1.77
HDAC8-202ENST00000373556 KIDINS220Q9ULH0 1771 aa26.1■■□□□ 1.77
HDAC8-202ENST00000373556 GPATCH8Q9UKJ3 1502 aaKnown RBP26.09■■□□□ 1.77
HDAC8-202ENST00000373556 SYCP2Q9BX26 1530 aa26.08■■□□□ 1.77
HDAC8-202ENST00000373556 PREX1Q8TCU6 1659 aa26.07■■□□□ 1.76
HDAC8-202ENST00000373556 AGLP35573 1532 aa26.04■■□□□ 1.76
HDAC8-202ENST00000373556 MTUS2Q5JR59 1369 aa26.03■■□□□ 1.76
HDAC8-202ENST00000373556 HNRNPMP52272 730 aaKnown RBP eCLIP26.02■■□□□ 1.76
HDAC8-202ENST00000373556 FBXO41Q8TF61 875 aa26.02■■□□□ 1.76
HDAC8-202ENST00000373556 CCNB3Q8WWL7 1395 aa26.02■■□□□ 1.76
HDAC8-202ENST00000373556 CEP162Q5TB80 1403 aa26■■□□□ 1.75
HDAC8-202ENST00000373556 CFDP1Q9UEE9 299 aaPredicted RBP26■■□□□ 1.75
HDAC8-202ENST00000373556 C3P01024 1663 aa25.99■■□□□ 1.75
HDAC8-202ENST00000373556 SPAG9O60271 1321 aaKnown RBP25.97■■□□□ 1.75
HDAC8-202ENST00000373556 ESF1Q9H501 851 aaKnown RBP25.95■■□□□ 1.74
HDAC8-202ENST00000373556 TIAM1Q13009 1591 aa25.95■■□□□ 1.74
HDAC8-202ENST00000373556 SUPT6HQ7KZ85 1726 aaKnown RBP25.94■■□□□ 1.74
HDAC8-202ENST00000373556 ATP7AQ04656 1500 aa25.94■■□□□ 1.74
HDAC8-202ENST00000373556 EHBP1L1Q8N3D4 1523 aa25.94■■□□□ 1.74
HDAC8-202ENST00000373556 PLEKHH2Q8IVE3 1493 aa25.94■■□□□ 1.74
HDAC8-202ENST00000373556 KIAA1107Q9UPP5 1409 aa25.94■■□□□ 1.74
HDAC8-202ENST00000373556 SETD1BQ9UPS6 1966 aaKnown RBP25.93■■□□□ 1.74
HDAC8-202ENST00000373556 UHRF1BP1Q6BDS2 1440 aa25.93■■□□□ 1.74
HDAC8-202ENST00000373556 INO80Q9ULG1 1556 aaPredicted RBP25.93■■□□□ 1.74
HDAC8-202ENST00000373556 STRCQ7RTU9 1775 aa25.9■■□□□ 1.74
HDAC8-202ENST00000373556 ZNF644Q9H582 1327 aaPredicted RBP25.89■■□□□ 1.74
HDAC8-202ENST00000373556 CNTLNQ9NXG0 1405 aa25.87■■□□□ 1.73
HDAC8-202ENST00000373556 PLXNC1O60486 1568 aa25.86■■□□□ 1.73
HDAC8-202ENST00000373556 A2MP01023 1474 aa25.85■■□□□ 1.73
HDAC8-202ENST00000373556 MROH2AA6NES4 1674 aa25.84■■□□□ 1.73
HDAC8-202ENST00000373556 CLTCQ00610 1675 aaKnown RBP25.82■■□□□ 1.72
HDAC8-202ENST00000373556 ADGBQ8N7X0 1667 aa25.81■■□□□ 1.72
HDAC8-202ENST00000373556 MBD5Q9P267 1494 aa25.81■■□□□ 1.72
HDAC8-202ENST00000373556 CERKQ8TCT0 537 aa25.81■■□□□ 1.72
HDAC8-202ENST00000373556 NCOA2Q15596 1464 aa25.79■■□□□ 1.72
HDAC8-202ENST00000373556 LOC105371045A0A1W2PR82 267 aa25.79■■□□□ 1.72
HDAC8-202ENST00000373556 ZMYM3Q14202 1370 aa25.78■■□□□ 1.72
HDAC8-202ENST00000373556 GGT6Q6P531 493 aa25.77■■□□□ 1.72
HDAC8-202ENST00000373556 DMRT2Q9Y5R5 561 aa25.77■■□□□ 1.72
HDAC8-202ENST00000373556 CAMSAP2Q08AD1 1489 aa25.74■■□□□ 1.71
HDAC8-202ENST00000373556 NPATQ14207 1427 aa25.74■■□□□ 1.71
HDAC8-202ENST00000373556 RTEL1-TNFRSF6BF6WH68 1400 aa25.71■■□□□ 1.71
HDAC8-202ENST00000373556 VPS8Q8N3P4 1428 aa25.71■■□□□ 1.71
HDAC8-202ENST00000373556 CCDC141Q6ZP82 1450 aa25.71■■□□□ 1.71
HDAC8-202ENST00000373556 PTPRTO14522 1441 aa25.69■■□□□ 1.7
HDAC8-202ENST00000373556 NCOA1Q15788 1441 aa25.69■■□□□ 1.7
HDAC8-202ENST00000373556 CAMSAP1Q5T5Y3 1602 aa25.68■■□□□ 1.7
HDAC8-202ENST00000373556 MYO3AQ8NEV4 1616 aa25.68■■□□□ 1.7
HDAC8-202ENST00000373556 PTPRKQ15262 1439 aa25.67■■□□□ 1.7
HDAC8-202ENST00000373556 DHX29Q7Z478 1369 aaKnown RBP25.67■■□□□ 1.7
HDAC8-202ENST00000373556 LRRC9Q6ZRR7 1453 aa25.66■■□□□ 1.7
HDAC8-202ENST00000373556 ZNF142P52746 1687 aaPredicted RBP25.64■■□□□ 1.69
HDAC8-202ENST00000373556 PPP6R1Q9UPN7 881 aa25.62■■□□□ 1.69
HDAC8-202ENST00000373556 ARHGEF5Q12774 1597 aa25.61■■□□□ 1.69
HDAC8-202ENST00000373556 KIF3BO15066 747 aa25.61■■□□□ 1.69
HDAC8-202ENST00000373556 CEP170BQ9Y4F5 1589 aaPredicted RBP25.61■■□□□ 1.69
HDAC8-202ENST00000373556 RSPH4AQ5TD94 716 aa25.6■■□□□ 1.69
HDAC8-202ENST00000373556 KANK4Q5T7N3 995 aaPredicted RBP25.59■■□□□ 1.69
HDAC8-202ENST00000373556 NCKAP5LQ9HCH0 1330 aa25.59■■□□□ 1.69
HDAC8-202ENST00000373556 LTBP4Q8N2S1 1624 aa25.56■■□□□ 1.68
HDAC8-202ENST00000373556 MAP3K1Q13233 1512 aa25.55■■□□□ 1.68
HDAC8-202ENST00000373556 TSPY4P0CV99 314 aa25.55■■□□□ 1.68
HDAC8-202ENST00000373556 TSPY10P0CW01 314 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms