RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 PHLDB1Q86UU1 1377 aa31.76■■■□□ 2.67
SYNC-201ENST00000373484 COL17A1Q9UMD9 1497 aaPredicted RBP31.74■■■□□ 2.67
SYNC-201ENST00000373484 KANK4Q5T7N3 995 aaPredicted RBP31.73■■■□□ 2.67
SYNC-201ENST00000373484 ARHGAP5Q13017 1502 aa31.72■■■□□ 2.67
SYNC-201ENST00000373484 NCOA2Q15596 1464 aa31.7■■■□□ 2.67
SYNC-201ENST00000373484 GPATCH8Q9UKJ3 1502 aaKnown RBP31.7■■■□□ 2.67
SYNC-201ENST00000373484 AKNAQ7Z591 1439 aa31.69■■■□□ 2.66
SYNC-201ENST00000373484 ITSN2Q9NZM3 1697 aa31.69■■■□□ 2.66
SYNC-201ENST00000373484 CCNB3Q8WWL7 1395 aa31.67■■■□□ 2.66
SYNC-201ENST00000373484 EFCAB2Q5VUJ9 269 aa31.66■■■□□ 2.66
SYNC-201ENST00000373484 ADGRL1O94910 1474 aa31.61■■■□□ 2.65
SYNC-201ENST00000373484 RICTORQ6R327 1708 aa31.6■■■□□ 2.65
SYNC-201ENST00000373484 FRMPD1Q5SYB0 1578 aa31.58■■■□□ 2.65
SYNC-201ENST00000373484 SAMD9LQ8IVG5 1584 aa31.57■■■□□ 2.64
SYNC-201ENST00000373484 DENND4BO75064 1496 aaPredicted RBP31.56■■■□□ 2.64
SYNC-201ENST00000373484 ABCC1P33527 1531 aa31.55■■■□□ 2.64
SYNC-201ENST00000373484 TRIM26Q12899 539 aaPredicted RBP31.55■■■□□ 2.64
SYNC-201ENST00000373484 CFDP1Q9UEE9 299 aaPredicted RBP31.54■■■□□ 2.64
SYNC-201ENST00000373484 SCAPERQ9BY12 1400 aa31.54■■■□□ 2.64
SYNC-201ENST00000373484 RAPGEF3O95398 923 aa31.51■■■□□ 2.63
SYNC-201ENST00000373484 POGZQ7Z3K3 1410 aa31.49■■■□□ 2.63
SYNC-201ENST00000373484 MYOM3Q5VTT5 1437 aa31.47■■■□□ 2.63
SYNC-201ENST00000373484 ZNF777Q9ULD5 760 aaPredicted RBP31.47■■■□□ 2.63
SYNC-201ENST00000373484 ARHGEF12Q9NZN5 1544 aa31.47■■■□□ 2.63
SYNC-201ENST00000373484 ZMYM4Q5VZL5 1548 aa31.45■■■□□ 2.63
SYNC-201ENST00000373484 PLEKHH2Q8IVE3 1493 aa31.45■■■□□ 2.63
SYNC-201ENST00000373484 SYCP2Q9BX26 1530 aa31.45■■■□□ 2.62
SYNC-201ENST00000373484 ZNF518AQ6AHZ1 1483 aa31.43■■■□□ 2.62
SYNC-201ENST00000373484 KIAA1107Q9UPP5 1409 aa31.42■■■□□ 2.62
SYNC-201ENST00000373484 KDM5CP41229 1560 aa31.42■■■□□ 2.62
SYNC-201ENST00000373484 MIA2Q96PC5 1412 aa31.41■■■□□ 2.62
SYNC-201ENST00000373484 CAMSAP2Q08AD1 1489 aa31.4■■■□□ 2.62
SYNC-201ENST00000373484 ZNF644Q9H582 1327 aaPredicted RBP31.39■■■□□ 2.62
SYNC-201ENST00000373484 TRAPPC8Q9Y2L5 1435 aa31.39■■■□□ 2.62
SYNC-201ENST00000373484 AFAP1Q8N556 730 aa31.35■■■□□ 2.61
SYNC-201ENST00000373484 MAGI2Q86UL8 1455 aa31.34■■■□□ 2.61
SYNC-201ENST00000373484 HNRNPMP52272 730 aaKnown RBP eCLIP31.34■■■□□ 2.61
SYNC-201ENST00000373484 MBD5Q9P267 1494 aa31.34■■■□□ 2.61
SYNC-201ENST00000373484 HECW2Q9P2P5 1572 aa31.33■■■□□ 2.61
SYNC-201ENST00000373484 ARHGEF40Q8TER5 1519 aa31.33■■■□□ 2.61
SYNC-201ENST00000373484 PTPN23Q9H3S7 1636 aa31.32■■■□□ 2.6
SYNC-201ENST00000373484 FGD6Q6ZV73 1430 aa31.32■■■□□ 2.6
SYNC-201ENST00000373484 PPARGC1BQ86YN6 1023 aaKnown RBP31.31■■■□□ 2.6
SYNC-201ENST00000373484 ZFYVE16Q7Z3T8 1539 aa31.31■■■□□ 2.6
SYNC-201ENST00000373484 ARHGEF5Q12774 1597 aa31.29■■■□□ 2.6
SYNC-201ENST00000373484 MLH3Q9UHC1 1453 aa31.28■■■□□ 2.6
SYNC-201ENST00000373484 ZEB1P37275 1124 aaPredicted RBP31.28■■■□□ 2.6
SYNC-201ENST00000373484 KIDINS220Q9ULH0 1771 aa31.27■■■□□ 2.6
SYNC-201ENST00000373484 YEATS2Q9ULM3 1422 aa31.27■■■□□ 2.6
SYNC-201ENST00000373484 TCOF1Q13428 1488 aaKnown RBP31.25■■■□□ 2.59
SYNC-201ENST00000373484 CCDC141Q6ZP82 1450 aa31.24■■■□□ 2.59
SYNC-201ENST00000373484 INO80Q9ULG1 1556 aaPredicted RBP31.24■■■□□ 2.59
SYNC-201ENST00000373484 ABCA6Q8N139 1617 aa31.21■■■□□ 2.59
SYNC-201ENST00000373484 DIP2CQ9Y2E4 1556 aa31.2■■■□□ 2.59
SYNC-201ENST00000373484 RSPH4AQ5TD94 716 aa31.2■■■□□ 2.59
SYNC-201ENST00000373484 ATP7AQ04656 1500 aa31.2■■■□□ 2.58
SYNC-201ENST00000373484 SPAG9O60271 1321 aaKnown RBP31.19■■■□□ 2.58
SYNC-201ENST00000373484 MYT1LQ9UL68 1186 aa31.16■■■□□ 2.58
SYNC-201ENST00000373484 ATP10AO60312 1499 aa31.16■■■□□ 2.58
SYNC-201ENST00000373484 CROCC2H7BZ55 1655 aa31.15■■■□□ 2.58
SYNC-201ENST00000373484 SIGLEC1Q9BZZ2 1709 aa31.15■■■□□ 2.58
SYNC-201ENST00000373484 DNMT1P26358 1616 aaKnown RBP31.15■■■□□ 2.58
SYNC-201ENST00000373484 RTEL1-TNFRSF6BF6WH68 1400 aa31.13■■■□□ 2.57
SYNC-201ENST00000373484 C9orf84Q5VXU9 1444 aa31.12■■■□□ 2.57
SYNC-201ENST00000373484 REREQ9P2R6 1566 aa31.12■■■□□ 2.57
SYNC-201ENST00000373484 MAST1Q9Y2H9 1570 aa31.12■■■□□ 2.57
SYNC-201ENST00000373484 ADGBQ8N7X0 1667 aa31.08■■■□□ 2.57
SYNC-201ENST00000373484 ABCC5O15440 1437 aa31.07■■■□□ 2.56
SYNC-201ENST00000373484 TSPY4P0CV99 314 aa31.07■■■□□ 2.56
SYNC-201ENST00000373484 TSPY10P0CW01 314 aa31.07■■■□□ 2.56
SYNC-201ENST00000373484 DAPK1P53355 1430 aa31.07■■■□□ 2.56
SYNC-201ENST00000373484 SHANK2Q9UPX8 1470 aa31.06■■■□□ 2.56
SYNC-201ENST00000373484 FAM50AQ14320 339 aaKnown RBP31.05■■■□□ 2.56
SYNC-201ENST00000373484 RRBP1Q9P2E9 1410 aaKnown RBP31.03■■■□□ 2.56
SYNC-201ENST00000373484 BCORL1Q5H9F3 1711 aa31.03■■■□□ 2.56
SYNC-201ENST00000373484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.01■■■□□ 2.55
SYNC-201ENST00000373484 PLXNC1O60486 1568 aa31.01■■■□□ 2.55
SYNC-201ENST00000373484 AGLP35573 1532 aa30.99■■■□□ 2.55
SYNC-201ENST00000373484 A2MP01023 1474 aa30.99■■■□□ 2.55
SYNC-201ENST00000373484 ARID4BQ4LE39 1312 aaPredicted RBP30.98■■■□□ 2.55
SYNC-201ENST00000373484 ADAMTSL3P82987 1691 aa30.95■■■□□ 2.55
SYNC-201ENST00000373484 KDM4FA0A1W2PPD8 638 aa30.94■■■□□ 2.54
SYNC-201ENST00000373484 DHX29Q7Z478 1369 aaKnown RBP30.91■■■□□ 2.54
SYNC-201ENST00000373484 ADGRL2O95490 1459 aa30.89■■■□□ 2.54
SYNC-201ENST00000373484 PTPRKQ15262 1439 aa30.87■■■□□ 2.53
SYNC-201ENST00000373484 MADDQ8WXG6 1647 aa30.87■■■□□ 2.53
SYNC-201ENST00000373484 CHIC2Q9UKJ5 165 aa30.86■■■□□ 2.53
SYNC-201ENST00000373484 FER1L4A9Z1Z3 1794 aa30.85■■■□□ 2.53
SYNC-201ENST00000373484 DUOX2Q9NRD8 1548 aa30.85■■■□□ 2.53
SYNC-201ENST00000373484 ANKRD30AQ9BXX3 1397 aa30.84■■■□□ 2.53
SYNC-201ENST00000373484 NCOA1Q15788 1441 aa30.84■■■□□ 2.53
SYNC-201ENST00000373484 KIF15Q9NS87 1388 aa30.84■■■□□ 2.53
SYNC-201ENST00000373484 MLECQ14165 292 aa30.82■■■□□ 2.52
SYNC-201ENST00000373484 EIF2AK4Q9P2K8 1649 aaKnown RBP30.82■■■□□ 2.52
SYNC-201ENST00000373484 RIMS1Q86UR5 1692 aaKnown RBP30.8■■■□□ 2.52
SYNC-201ENST00000373484 RRP7BPQ9NSQ0 103 aa30.8■■■□□ 2.52
SYNC-201ENST00000373484 ITGAEP38570 1179 aa30.78■■■□□ 2.52
SYNC-201ENST00000373484 ROCK1Q13464 1354 aa30.77■■■□□ 2.52
SYNC-201ENST00000373484 ERBINQ96RT1 1412 aa30.75■■■□□ 2.51
SYNC-201ENST00000373484 RNF17Q9BXT8 1623 aaKnown RBP30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms