RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 PHLDB1Q86UU1 1377 aa39.62■■■■□ 3.93
C9orf50-201ENST00000372478 SUPT6HQ7KZ85 1726 aaKnown RBP39.6■■■■□ 3.93
C9orf50-201ENST00000372478 AKNAQ7Z591 1439 aa39.6■■■■□ 3.93
C9orf50-201ENST00000372478 EFCAB2Q5VUJ9 269 aa39.58■■■■□ 3.93
C9orf50-201ENST00000372478 GPATCH8Q9UKJ3 1502 aaKnown RBP39.56■■■■□ 3.92
C9orf50-201ENST00000372478 CCNB3Q8WWL7 1395 aa39.55■■■■□ 3.92
C9orf50-201ENST00000372478 NCOA2Q15596 1464 aa39.54■■■■□ 3.92
C9orf50-201ENST00000372478 ADGRL1O94910 1474 aa39.49■■■■□ 3.91
C9orf50-201ENST00000372478 RAPGEF3O95398 923 aa39.48■■■■□ 3.91
C9orf50-201ENST00000372478 ITSN2Q9NZM3 1697 aa39.45■■■■□ 3.91
C9orf50-201ENST00000372478 DENND4BO75064 1496 aaPredicted RBP39.45■■■■□ 3.91
C9orf50-201ENST00000372478 FRMPD1Q5SYB0 1578 aa39.44■■■■□ 3.9
C9orf50-201ENST00000372478 SCAPERQ9BY12 1400 aa39.44■■■■□ 3.9
C9orf50-201ENST00000372478 RICTORQ6R327 1708 aa39.42■■■■□ 3.9
C9orf50-201ENST00000372478 CFDP1Q9UEE9 299 aaPredicted RBP39.42■■■■□ 3.9
C9orf50-201ENST00000372478 ZNF777Q9ULD5 760 aaPredicted RBP39.42■■■■□ 3.9
C9orf50-201ENST00000372478 SAMD9LQ8IVG5 1584 aa39.39■■■■□ 3.9
C9orf50-201ENST00000372478 ABCC1P33527 1531 aa39.37■■■■□ 3.89
C9orf50-201ENST00000372478 POGZQ7Z3K3 1410 aa39.33■■■■□ 3.89
C9orf50-201ENST00000372478 ARHGEF12Q9NZN5 1544 aa39.31■■■■□ 3.88
C9orf50-201ENST00000372478 ZNF644Q9H582 1327 aaPredicted RBP39.27■■■■□ 3.88
C9orf50-201ENST00000372478 SYCP2Q9BX26 1530 aa39.27■■■■□ 3.88
C9orf50-201ENST00000372478 TRAPPC8Q9Y2L5 1435 aa39.24■■■■□ 3.87
C9orf50-201ENST00000372478 ZMYM4Q5VZL5 1548 aa39.23■■■■□ 3.87
C9orf50-201ENST00000372478 AFAP1Q8N556 730 aa39.23■■■■□ 3.87
C9orf50-201ENST00000372478 MYOM3Q5VTT5 1437 aa39.23■■■■□ 3.87
C9orf50-201ENST00000372478 ZNF518AQ6AHZ1 1483 aa39.23■■■■□ 3.87
C9orf50-201ENST00000372478 PLEKHH2Q8IVE3 1493 aa39.22■■■■□ 3.87
C9orf50-201ENST00000372478 HNRNPMP52272 730 aaKnown RBP eCLIP39.21■■■■□ 3.87
C9orf50-201ENST00000372478 PPARGC1BQ86YN6 1023 aaKnown RBP39.2■■■■□ 3.87
C9orf50-201ENST00000372478 CAMSAP2Q08AD1 1489 aa39.18■■■■□ 3.86
C9orf50-201ENST00000372478 KIAA1107Q9UPP5 1409 aa39.18■■■■□ 3.86
C9orf50-201ENST00000372478 KDM5CP41229 1560 aa39.18■■■■□ 3.86
C9orf50-201ENST00000372478 ARHGEF40Q8TER5 1519 aa39.13■■■■□ 3.85
C9orf50-201ENST00000372478 ZFYVE16Q7Z3T8 1539 aa39.12■■■■□ 3.85
C9orf50-201ENST00000372478 MIA2Q96PC5 1412 aa39.12■■■■□ 3.85
C9orf50-201ENST00000372478 YEATS2Q9ULM3 1422 aa39.12■■■■□ 3.85
C9orf50-201ENST00000372478 MAGI2Q86UL8 1455 aa39.11■■■■□ 3.85
C9orf50-201ENST00000372478 HECW2Q9P2P5 1572 aa39.09■■■■□ 3.85
C9orf50-201ENST00000372478 MBD5Q9P267 1494 aa39.09■■■■□ 3.85
C9orf50-201ENST00000372478 MYT1LQ9UL68 1186 aa39.07■■■■□ 3.85
C9orf50-201ENST00000372478 FGD6Q6ZV73 1430 aa39.04■■■■□ 3.84
C9orf50-201ENST00000372478 MLH3Q9UHC1 1453 aa39.03■■■■□ 3.84
C9orf50-201ENST00000372478 PTPN23Q9H3S7 1636 aa39.03■■■■□ 3.84
C9orf50-201ENST00000372478 KIDINS220Q9ULH0 1771 aa39.01■■■■□ 3.83
C9orf50-201ENST00000372478 SPAG9O60271 1321 aaKnown RBP38.99■■■■□ 3.83
C9orf50-201ENST00000372478 CCDC141Q6ZP82 1450 aa38.97■■■■□ 3.83
C9orf50-201ENST00000372478 ABCA6Q8N139 1617 aa38.97■■■■□ 3.83
C9orf50-201ENST00000372478 ARHGEF5Q12774 1597 aa38.97■■■■□ 3.83
C9orf50-201ENST00000372478 DIP2CQ9Y2E4 1556 aa38.95■■■■□ 3.83
C9orf50-201ENST00000372478 INO80Q9ULG1 1556 aaPredicted RBP38.94■■■■□ 3.82
C9orf50-201ENST00000372478 ATP7AQ04656 1500 aa38.93■■■■□ 3.82
C9orf50-201ENST00000372478 ATP10AO60312 1499 aa38.93■■■■□ 3.82
C9orf50-201ENST00000372478 SIGLEC1Q9BZZ2 1709 aa38.93■■■■□ 3.82
C9orf50-201ENST00000372478 TCOF1Q13428 1488 aaKnown RBP38.92■■■■□ 3.82
C9orf50-201ENST00000372478 RSPH4AQ5TD94 716 aa38.89■■■■□ 3.82
C9orf50-201ENST00000372478 C9orf84Q5VXU9 1444 aa38.88■■■■□ 3.81
C9orf50-201ENST00000372478 ARID4BQ4LE39 1312 aaPredicted RBP38.88■■■■□ 3.81
C9orf50-201ENST00000372478 FAM50AQ14320 339 aaKnown RBP38.82■■■■□ 3.81
C9orf50-201ENST00000372478 KDM4FA0A1W2PPD8 638 aa38.81■■■■□ 3.8
C9orf50-201ENST00000372478 TSPY4P0CV99 314 aa38.81■■■■□ 3.8
C9orf50-201ENST00000372478 TSPY10P0CW01 314 aa38.81■■■■□ 3.8
C9orf50-201ENST00000372478 RTEL1-TNFRSF6BF6WH68 1400 aa38.8■■■■□ 3.8
C9orf50-201ENST00000372478 DNMT1P26358 1616 aaKnown RBP38.79■■■■□ 3.8
C9orf50-201ENST00000372478 REREQ9P2R6 1566 aa38.78■■■■□ 3.8
C9orf50-201ENST00000372478 CROCC2H7BZ55 1655 aa38.77■■■■□ 3.8
C9orf50-201ENST00000372478 ABCC5O15440 1437 aa38.77■■■■□ 3.8
C9orf50-201ENST00000372478 BCORL1Q5H9F3 1711 aa38.76■■■■□ 3.79
C9orf50-201ENST00000372478 DAPK1P53355 1430 aa38.75■■■■□ 3.79
C9orf50-201ENST00000372478 MAST1Q9Y2H9 1570 aa38.75■■■■□ 3.79
C9orf50-201ENST00000372478 ADGBQ8N7X0 1667 aa38.74■■■■□ 3.79
C9orf50-201ENST00000372478 A2MP01023 1474 aa38.7■■■■□ 3.79
C9orf50-201ENST00000372478 MLECQ14165 292 aa38.69■■■■□ 3.78
C9orf50-201ENST00000372478 SHANK2Q9UPX8 1470 aa38.67■■■■□ 3.78
C9orf50-201ENST00000372478 ADAMTSL3P82987 1691 aa38.67■■■■□ 3.78
C9orf50-201ENST00000372478 PLXNC1O60486 1568 aa38.66■■■■□ 3.78
C9orf50-201ENST00000372478 AGLP35573 1532 aa38.65■■■■□ 3.78
C9orf50-201ENST00000372478 MADDQ8WXG6 1647 aa38.61■■■■□ 3.77
C9orf50-201ENST00000372478 RRBP1Q9P2E9 1410 aaKnown RBP38.6■■■■□ 3.77
C9orf50-201ENST00000372478 CHIC2Q9UKJ5 165 aa38.6■■■■□ 3.77
C9orf50-201ENST00000372478 DHX29Q7Z478 1369 aaKnown RBP38.58■■■■□ 3.77
C9orf50-201ENST00000372478 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.55■■■■□ 3.76
C9orf50-201ENST00000372478 FER1L4A9Z1Z3 1794 aa38.53■■■■□ 3.76
C9orf50-201ENST00000372478 AEBP2Q6ZN18 517 aaPredicted RBP38.52■■■■□ 3.76
C9orf50-201ENST00000372478 RIMS1Q86UR5 1692 aaKnown RBP38.52■■■■□ 3.76
C9orf50-201ENST00000372478 PTPRKQ15262 1439 aa38.52■■■■□ 3.76
C9orf50-201ENST00000372478 ITGAEP38570 1179 aa38.52■■■■□ 3.76
C9orf50-201ENST00000372478 RRP7BPQ9NSQ0 103 aa38.51■■■■□ 3.76
C9orf50-201ENST00000372478 KIF15Q9NS87 1388 aa38.5■■■■□ 3.75
C9orf50-201ENST00000372478 ANKRD30AQ9BXX3 1397 aa38.48■■■■□ 3.75
C9orf50-201ENST00000372478 DUOX2Q9NRD8 1548 aa38.47■■■■□ 3.75
C9orf50-201ENST00000372478 ADGRL2O95490 1459 aa38.46■■■■□ 3.75
C9orf50-201ENST00000372478 NCOA1Q15788 1441 aa38.45■■■■□ 3.75
C9orf50-201ENST00000372478 KIF3BO15066 747 aa38.45■■■■□ 3.75
C9orf50-201ENST00000372478 GGT6Q6P531 493 aa38.43■■■■□ 3.74
C9orf50-201ENST00000372478 PTPRMP28827 1452 aa38.42■■■■□ 3.74
C9orf50-201ENST00000372478 EIF2AK4Q9P2K8 1649 aaKnown RBP38.38■■■■□ 3.73
C9orf50-201ENST00000372478 ERBINQ96RT1 1412 aa38.34■■■■□ 3.73
C9orf50-201ENST00000372478 PLPPR3Q6T4P5 718 aa38.34■■■■□ 3.73
C9orf50-201ENST00000372478 ESF1Q9H501 851 aaKnown RBP38.34■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms