RNA–Protein interactions for RNA: ENST00000371953.7

PTEN-201, Transcript of phosphatase and tensin homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTEN, Length 9,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-201ENST00000371953 TIMELESSQ9UNS1 1208 aa20.9■□□□□ 0.94
PTEN-201ENST00000371953 TEX35Q5T0J7 233 aa20.88■□□□□ 0.93
PTEN-201ENST00000371953 NPHP1O15259 732 aa20.88■□□□□ 0.93
PTEN-201ENST00000371953 TPRNQ4KMQ1 711 aa20.87■□□□□ 0.93
PTEN-201ENST00000371953 HIRIP3Q9BW71 556 aaPredicted RBP20.87■□□□□ 0.93
PTEN-201ENST00000371953 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
PTEN-201ENST00000371953 SKOR2Q2VWA4 1001 aaPredicted RBP20.86■□□□□ 0.93
PTEN-201ENST00000371953 GPS2Q13227 327 aa20.85■□□□□ 0.93
PTEN-201ENST00000371953 SLKQ9H2G2 1235 aaPredicted RBP20.84■□□□□ 0.93
PTEN-201ENST00000371953 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
PTEN-201ENST00000371953 MAPK8IP3Q9UPT6 1336 aa20.83■□□□□ 0.93
PTEN-201ENST00000371953 RGL3Q3MIN7 710 aa20.83■□□□□ 0.93
PTEN-201ENST00000371953 CCDC66A2RUB6 948 aa20.81■□□□□ 0.92
PTEN-201ENST00000371953 CALD1Q05682 793 aaKnown RBP20.81■□□□□ 0.92
PTEN-201ENST00000371953 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
PTEN-201ENST00000371953 NOC3LQ8WTT2 800 aaKnown RBP20.8■□□□□ 0.92
PTEN-201ENST00000371953 TPM2P07951 284 aa20.8■□□□□ 0.92
PTEN-201ENST00000371953 TPM4P67936 248 aa20.8■□□□□ 0.92
PTEN-201ENST00000371953 TAF3Q5VWG9 929 aa20.8■□□□□ 0.92
PTEN-201ENST00000371953 TULP1O00294 542 aaPredicted RBP20.79■□□□□ 0.92
PTEN-201ENST00000371953 EIF4G1Q04637 1599 aaKnown RBP20.79■□□□□ 0.92
PTEN-201ENST00000371953 RRP9O43818 475 aaKnown RBP20.78■□□□□ 0.92
PTEN-201ENST00000371953 CFDP1Q9UEE9 299 aaPredicted RBP20.78■□□□□ 0.92
PTEN-201ENST00000371953 SPRYD3Q8NCJ5 442 aa20.78■□□□□ 0.92
PTEN-201ENST00000371953 NUDCQ9Y266 331 aa20.78■□□□□ 0.92
PTEN-201ENST00000371953 FAM43AQ8N2R8 423 aa20.78■□□□□ 0.92
PTEN-201ENST00000371953 FAM13BQ9NYF5 915 aa20.76■□□□□ 0.91
PTEN-201ENST00000371953 GOLGA2Q08379 1002 aa20.76■□□□□ 0.91
PTEN-201ENST00000371953 POGKQ9P215 609 aa20.75■□□□□ 0.91
PTEN-201ENST00000371953 CARD11Q9BXL7 1154 aa20.75■□□□□ 0.91
PTEN-201ENST00000371953 KANK1Q14678 1352 aa20.75■□□□□ 0.91
PTEN-201ENST00000371953 FGD1P98174 961 aa20.74■□□□□ 0.91
PTEN-201ENST00000371953 CWC15Q9P013 229 aaKnown RBP20.73■□□□□ 0.91
PTEN-201ENST00000371953 OS9Q13438 667 aaPredicted RBP20.73■□□□□ 0.91
PTEN-201ENST00000371953 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
PTEN-201ENST00000371953 WRNQ14191 1432 aaPredicted RBP eCLIP20.71■□□□□ 0.91
PTEN-201ENST00000371953 FHAD1B1AJZ9 1412 aa20.71■□□□□ 0.91
PTEN-201ENST00000371953 FRAT1Q92837 279 aaPredicted RBP20.7■□□□□ 0.9
PTEN-201ENST00000371953 KCNJ4P48050 445 aa20.69■□□□□ 0.9
PTEN-201ENST00000371953 ANO8Q9HCE9 1232 aaPredicted RBP20.69■□□□□ 0.9
PTEN-201ENST00000371953 RCAN3Q9UKA8 241 aa20.69■□□□□ 0.9
PTEN-201ENST00000371953 LMOD2Q6P5Q4 547 aa20.69■□□□□ 0.9
PTEN-201ENST00000371953 KIF16BQ96L93 1317 aa20.66■□□□□ 0.9
PTEN-201ENST00000371953 KAT6BQ8WYB5 2073 aa20.66■□□□□ 0.9
PTEN-201ENST00000371953 UBE2Q2Q8WVN8 375 aa20.63■□□□□ 0.89
PTEN-201ENST00000371953 CCDC34Q96HJ3 373 aa20.62■□□□□ 0.89
PTEN-201ENST00000371953 HDGFP51858 240 aaKnown RBP20.62■□□□□ 0.89
PTEN-201ENST00000371953 NEUROD2Q15784 382 aa20.62■□□□□ 0.89
PTEN-201ENST00000371953 PMFBP1Q8TBY8 1022 aa20.62■□□□□ 0.89
PTEN-201ENST00000371953 RWDD1Q9H446 243 aaPredicted RBP20.62■□□□□ 0.89
PTEN-201ENST00000371953 NAP1L2Q9ULW6 460 aaPredicted RBP20.61■□□□□ 0.89
PTEN-201ENST00000371953 TAOK2Q9UL54 1235 aa20.58■□□□□ 0.89
PTEN-201ENST00000371953 CCDC70Q6NSX1 233 aa20.58■□□□□ 0.88
PTEN-201ENST00000371953 CCNB3Q8WWL7 1395 aa20.58■□□□□ 0.88
PTEN-201ENST00000371953 U2SURPO15042 1029 aaKnown RBP20.57■□□□□ 0.88
PTEN-201ENST00000371953 KIAA1211Q6ZU35 1233 aa20.56■□□□□ 0.88
PTEN-201ENST00000371953 PHLDB1Q86UU1 1377 aa20.56■□□□□ 0.88
PTEN-201ENST00000371953 FAM161AQ3B820 660 aa20.56■□□□□ 0.88
PTEN-201ENST00000371953 CC2D1BQ5T0F9 858 aaKnown RBP20.56■□□□□ 0.88
PTEN-201ENST00000371953 ST18O60284 1047 aa20.56■□□□□ 0.88
PTEN-201ENST00000371953 ARGLU1Q9NWB6 273 aaPredicted RBP20.56■□□□□ 0.88
PTEN-201ENST00000371953 DIAPH3Q9NSV4 1193 aa20.55■□□□□ 0.88
PTEN-201ENST00000371953 TMF1P82094 1093 aa20.55■□□□□ 0.88
PTEN-201ENST00000371953 TNIKQ9UKE5 1360 aa20.54■□□□□ 0.88
PTEN-201ENST00000371953 IPO8O15397 1037 aaKnown RBP20.54■□□□□ 0.88
PTEN-201ENST00000371953 ATP6V1DQ9Y5K8 247 aa20.53■□□□□ 0.88
PTEN-201ENST00000371953 HMGN5P82970 282 aaKnown RBP20.53■□□□□ 0.88
PTEN-201ENST00000371953 ARHGAP35Q9NRY4 1499 aa20.53■□□□□ 0.88
PTEN-201ENST00000371953 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
PTEN-201ENST00000371953 TPM3P06753 285 aa20.53■□□□□ 0.88
PTEN-201ENST00000371953 GNL2Q13823 731 aaKnown RBP20.52■□□□□ 0.88
PTEN-201ENST00000371953 KTN1Q86UP2 1357 aaKnown RBP20.52■□□□□ 0.88
PTEN-201ENST00000371953 CENPQQ7L2Z9 268 aaPredicted RBP20.52■□□□□ 0.87
PTEN-201ENST00000371953 PDE4AP27815 886 aa20.51■□□□□ 0.87
PTEN-201ENST00000371953 DDX49Q9Y6V7 483 aaKnown RBP20.51■□□□□ 0.87
PTEN-201ENST00000371953 MRE11P49959 708 aa20.5■□□□□ 0.87
PTEN-201ENST00000371953 RDXP35241 583 aaKnown RBP20.49■□□□□ 0.87
PTEN-201ENST00000371953 PDE3BQ13370 1112 aa20.49■□□□□ 0.87
PTEN-201ENST00000371953 ACBD3Q9H3P7 528 aa20.49■□□□□ 0.87
PTEN-201ENST00000371953 RTF1Q92541 710 aaKnown RBP20.47■□□□□ 0.87
PTEN-201ENST00000371953 SRPK2P78362 688 aaKnown RBP20.47■□□□□ 0.87
PTEN-201ENST00000371953 GOLGA6L19H0YKK7 550 aa20.47■□□□□ 0.87
PTEN-201ENST00000371953 CLSTN1O94985 981 aa20.47■□□□□ 0.87
PTEN-201ENST00000371953 RALBP1Q15311 655 aa20.46■□□□□ 0.87
PTEN-201ENST00000371953 TSPYL1Q9H0U9 437 aa20.45■□□□□ 0.86
PTEN-201ENST00000371953 MFAP1P55081 439 aaKnown RBP20.45■□□□□ 0.86
PTEN-201ENST00000371953 ZBED9Q6R2W3 1325 aa20.45■□□□□ 0.86
PTEN-201ENST00000371953 SENP3-EIF4A1A0A087X0R7 540 aa20.45■□□□□ 0.86
PTEN-201ENST00000371953 CCDC39Q9UFE4 941 aa20.45■□□□□ 0.86
PTEN-201ENST00000371953 SMARCA2P51531 1590 aa20.44■□□□□ 0.86
PTEN-201ENST00000371953 ISY1Q9ULR0 285 aaKnown RBP20.43■□□□□ 0.86
PTEN-201ENST00000371953 DCAF11Q8TEB1 546 aa20.43■□□□□ 0.86
PTEN-201ENST00000371953 HSP90B2PQ58FF3 399 aa20.43■□□□□ 0.86
PTEN-201ENST00000371953 NASPP49321 788 aaPredicted RBP20.42■□□□□ 0.86
PTEN-201ENST00000371953 AK7Q96M32 723 aa20.4■□□□□ 0.86
PTEN-201ENST00000371953 NFKBIBQ15653 356 aa20.39■□□□□ 0.85
PTEN-201ENST00000371953 RRP12Q5JTH9 1297 aaKnown RBP20.39■□□□□ 0.85
PTEN-201ENST00000371953 KIF3AQ9Y496 699 aa20.39■□□□□ 0.85
PTEN-201ENST00000371953 MORC1Q86VD1 984 aa20.38■□□□□ 0.85
PTEN-201ENST00000371953 SETD5Q9C0A6 1442 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms