RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 WASHC2AQ641Q2 1341 aa32.04■■■□□ 2.72
BRD3-202ENST00000371834 ROCK1Q13464 1354 aa32.02■■■□□ 2.72
BRD3-202ENST00000371834 DNMT1P26358 1616 aaKnown RBP32.02■■■□□ 2.72
BRD3-202ENST00000371834 CDK11AQ9UQ88 783 aaPredicted RBP31.99■■■□□ 2.71
BRD3-202ENST00000371834 PRG4Q92954 1404 aaPredicted RBP31.98■■■□□ 2.71
BRD3-202ENST00000371834 EIF4G2P78344 907 aaKnown RBP eCLIP31.97■■■□□ 2.71
BRD3-202ENST00000371834 ANKRD30BQ9BXX2 1392 aa31.95■■■□□ 2.71
BRD3-202ENST00000371834 CHMP7Q8WUX9 453 aaPredicted RBP31.94■■■□□ 2.7
BRD3-202ENST00000371834 TSHZ2Q9NRE2 1034 aa31.93■■■□□ 2.7
BRD3-202ENST00000371834 PLB1Q6P1J6 1458 aa31.92■■■□□ 2.7
BRD3-202ENST00000371834 ERCC6Q03468 1493 aa31.92■■■□□ 2.7
BRD3-202ENST00000371834 CEP170Q5SW79 1584 aa31.92■■■□□ 2.7
BRD3-202ENST00000371834 FBLN2P98095 1184 aa31.91■■■□□ 2.7
BRD3-202ENST00000371834 SLC4A1APQ9BWU0 796 aaKnown RBP31.9■■■□□ 2.7
BRD3-202ENST00000371834 TROQ12816 1431 aaPredicted RBP31.9■■■□□ 2.7
BRD3-202ENST00000371834 RPRD2Q5VT52 1461 aaKnown RBP31.89■■■□□ 2.7
BRD3-202ENST00000371834 MAGI1Q96QZ7 1491 aaPredicted RBP31.89■■■□□ 2.69
BRD3-202ENST00000371834 NBPF8Q3BBV2 869 aa31.88■■■□□ 2.69
BRD3-202ENST00000371834 CFDP1Q9UEE9 299 aaPredicted RBP31.87■■■□□ 2.69
BRD3-202ENST00000371834 C11orf95C9JLR9 678 aaPredicted RBP31.87■■■□□ 2.69
BRD3-202ENST00000371834 CAMSAP2Q08AD1 1489 aa31.86■■■□□ 2.69
BRD3-202ENST00000371834 SYNJ2O15056 1496 aa31.85■■■□□ 2.69
BRD3-202ENST00000371834 ZNF777Q9ULD5 760 aaPredicted RBP31.84■■■□□ 2.69
BRD3-202ENST00000371834 TEX14Q8IWB6 1497 aa31.84■■■□□ 2.69
BRD3-202ENST00000371834 NEFLP07196 543 aa31.83■■■□□ 2.69
BRD3-202ENST00000371834 KIF14Q15058 1648 aa31.82■■■□□ 2.68
BRD3-202ENST00000371834 GPATCH8Q9UKJ3 1502 aaKnown RBP31.82■■■□□ 2.68
BRD3-202ENST00000371834 CNTLNQ9NXG0 1405 aa31.79■■■□□ 2.68
BRD3-202ENST00000371834 HNRNPUQ00839 825 aaKnown RBP eCLIP31.79■■■□□ 2.68
BRD3-202ENST00000371834 JPH4Q96JJ6 628 aa31.78■■■□□ 2.68
BRD3-202ENST00000371834 PZPP20742 1482 aa31.78■■■□□ 2.68
BRD3-202ENST00000371834 NCOA1Q15788 1441 aa31.77■■■□□ 2.68
BRD3-202ENST00000371834 CCDC7Q96M83 1385 aa31.76■■■□□ 2.68
BRD3-202ENST00000371834 ITSN2Q9NZM3 1697 aa31.76■■■□□ 2.68
BRD3-202ENST00000371834 CARMIL2Q6F5E8 1435 aa31.73■■■□□ 2.67
BRD3-202ENST00000371834 CCDC184Q52MB2 194 aa31.73■■■□□ 2.67
BRD3-202ENST00000371834 ADCY10Q96PN6 1610 aa31.72■■■□□ 2.67
BRD3-202ENST00000371834 NUP160Q12769 1436 aa31.71■■■□□ 2.67
BRD3-202ENST00000371834 ADGBQ8N7X0 1667 aa31.7■■■□□ 2.67
BRD3-202ENST00000371834 SPATA31E1Q6ZUB1 1445 aa31.67■■■□□ 2.66
BRD3-202ENST00000371834 ADGRL2O95490 1459 aa31.66■■■□□ 2.66
BRD3-202ENST00000371834 CROCC2H7BZ55 1655 aa31.65■■■□□ 2.66
BRD3-202ENST00000371834 PRKRIP1Q9H875 184 aaPredicted RBP31.65■■■□□ 2.66
BRD3-202ENST00000371834 KIF7Q2M1P5 1343 aa31.64■■■□□ 2.66
BRD3-202ENST00000371834 ANKRD30AQ9BXX3 1397 aa31.62■■■□□ 2.65
BRD3-202ENST00000371834 KIAA1107Q9UPP5 1409 aa31.62■■■□□ 2.65
BRD3-202ENST00000371834 PKD2Q13563 968 aa31.62■■■□□ 2.65
BRD3-202ENST00000371834 PLEKHD1A6NEE1 506 aa31.61■■■□□ 2.65
BRD3-202ENST00000371834 MYT1Q01538 1121 aa31.6■■■□□ 2.65
BRD3-202ENST00000371834 ABCA8O94911 1581 aa31.58■■■□□ 2.65
BRD3-202ENST00000371834 ATP10BO94823 1461 aa31.58■■■□□ 2.65
BRD3-202ENST00000371834 ANKRD50Q9ULJ7 1429 aa31.57■■■□□ 2.64
BRD3-202ENST00000371834 CDC42BPAQ5VT25 1732 aa31.57■■■□□ 2.64
BRD3-202ENST00000371834 ZNF326Q5BKZ1 582 aaKnown RBP31.56■■■□□ 2.64
BRD3-202ENST00000371834 MBD5Q9P267 1494 aa31.55■■■□□ 2.64
BRD3-202ENST00000371834 ABCC10Q5T3U5 1492 aa31.54■■■□□ 2.64
BRD3-202ENST00000371834 FAM9BQ8IZU0 186 aa31.54■■■□□ 2.64
BRD3-202ENST00000371834 MRS2Q9HD23 443 aa31.53■■■□□ 2.64
BRD3-202ENST00000371834 IRX6P78412 446 aaPredicted RBP31.51■■■□□ 2.64
BRD3-202ENST00000371834 POLR1AO95602 1720 aaPredicted RBP31.51■■■□□ 2.63
BRD3-202ENST00000371834 C9orf84Q5VXU9 1444 aa31.49■■■□□ 2.63
BRD3-202ENST00000371834 NUP155O75694 1391 aa31.47■■■□□ 2.63
BRD3-202ENST00000371834 USP47Q96K76 1375 aa31.46■■■□□ 2.63
BRD3-202ENST00000371834 HNRNPMP52272 730 aaKnown RBP eCLIP31.44■■■□□ 2.622e-6■■■■■ 30.5
BRD3-202ENST00000371834 SHANK2Q9UPX8 1470 aa31.43■■■□□ 2.62
BRD3-202ENST00000371834 POLR3GLQ9BT43 218 aa31.43■■■□□ 2.62
BRD3-202ENST00000371834 TSPY4P0CV99 314 aa31.42■■■□□ 2.62
BRD3-202ENST00000371834 TSPY10P0CW01 314 aa31.42■■■□□ 2.62
BRD3-202ENST00000371834 BCORL1Q5H9F3 1711 aa31.42■■■□□ 2.62
BRD3-202ENST00000371834 CNGB1Q14028 1251 aaPredicted RBP31.4■■■□□ 2.62
BRD3-202ENST00000371834 DHX29Q7Z478 1369 aaKnown RBP31.36■■■□□ 2.61
BRD3-202ENST00000371834 KIF15Q9NS87 1388 aa31.36■■■□□ 2.61
BRD3-202ENST00000371834 PTPRGP23470 1445 aa31.35■■■□□ 2.61
BRD3-202ENST00000371834 KDM5CP41229 1560 aa31.35■■■□□ 2.61
BRD3-202ENST00000371834 RBM19Q9Y4C8 960 aaKnown RBP31.34■■■□□ 2.61
BRD3-202ENST00000371834 ZBED9Q6R2W3 1325 aa31.33■■■□□ 2.61
BRD3-202ENST00000371834 UHRF1BP1Q6BDS2 1440 aa31.31■■■□□ 2.6
BRD3-202ENST00000371834 KDM5DQ9BY66 1539 aa31.3■■■□□ 2.6
BRD3-202ENST00000371834 KDM2AQ9Y2K7 1162 aa31.3■■■□□ 2.6
BRD3-202ENST00000371834 RALGAPBQ86X10 1494 aa31.28■■■□□ 2.6
BRD3-202ENST00000371834 ARHGEF5Q12774 1597 aa31.28■■■□□ 2.6
BRD3-202ENST00000371834 CARD11Q9BXL7 1154 aa31.28■■■□□ 2.6
BRD3-202ENST00000371834 SAMD9LQ8IVG5 1584 aa31.26■■■□□ 2.6
BRD3-202ENST00000371834 CDC42BPBQ9Y5S2 1711 aa31.24■■■□□ 2.59
BRD3-202ENST00000371834 ARHGEF12Q9NZN5 1544 aa31.23■■■□□ 2.59
BRD3-202ENST00000371834 DCAF11Q8TEB1 546 aa31.23■■■□□ 2.59
BRD3-202ENST00000371834 CCDC141Q6ZP82 1450 aa31.22■■■□□ 2.59
BRD3-202ENST00000371834 ARID4BQ4LE39 1312 aaPredicted RBP31.2■■■□□ 2.59
BRD3-202ENST00000371834 PREX2Q70Z35 1606 aa31.2■■■□□ 2.58
BRD3-202ENST00000371834 ST20-MTHFSA0A0A6YYL1 179 aa31.18■■■□□ 2.58
BRD3-202ENST00000371834 FAM135AQ9P2D6 1515 aa31.16■■■□□ 2.58
BRD3-202ENST00000371834 ERICH6BQ5W0A0 696 aa31.15■■■□□ 2.58
BRD3-202ENST00000371834 ANP32EQ9BTT0 268 aa31.15■■■□□ 2.58
BRD3-202ENST00000371834 PPP4R2Q9NY27 417 aa31.14■■■□□ 2.58
BRD3-202ENST00000371834 CHD1O14646 1710 aa31.13■■■□□ 2.57
BRD3-202ENST00000371834 SYCP2Q9BX26 1530 aa31.12■■■□□ 2.57
BRD3-202ENST00000371834 ROCK2O75116 1388 aaKnown RBP31.11■■■□□ 2.57
BRD3-202ENST00000371834 TTC37Q6PGP7 1564 aa31.11■■■□□ 2.57
BRD3-202ENST00000371834 SENP3-EIF4A1A0A087X0R7 540 aa31.1■■■□□ 2.57
BRD3-202ENST00000371834 RSPH4AQ5TD94 716 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms