RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 PAK3O75914 559 aaPredicted RBP19.18■□□□□ 0.66
NDC1-201ENST00000371429 EID1Q9Y6B2 187 aa19.18■□□□□ 0.66
NDC1-201ENST00000371429 PTPRGP23470 1445 aa19.17■□□□□ 0.66
NDC1-201ENST00000371429 FRAT1Q92837 279 aaPredicted RBP19.16■□□□□ 0.66
NDC1-201ENST00000371429 CCDC18Q5T9S5 1454 aa19.15■□□□□ 0.66
NDC1-201ENST00000371429 HSPA5P11021 654 aaKnown RBP19.12■□□□□ 0.65
NDC1-201ENST00000371429 ROCK2O75116 1388 aaKnown RBP19.09■□□□□ 0.65
NDC1-201ENST00000371429 CHMP4BQ9H444 224 aaKnown RBP19.09■□□□□ 0.65
NDC1-201ENST00000371429 CSB-PGBD3P0DP91 1061 aa19.09■□□□□ 0.65
NDC1-201ENST00000371429 RAB3GAP2Q9H2M9 1393 aa19.09■□□□□ 0.65
NDC1-201ENST00000371429 SUPT16HQ9Y5B9 1047 aaKnown RBP19.09■□□□□ 0.65
NDC1-201ENST00000371429 NUTM2DQ5VT03 806 aaPredicted RBP19.08■□□□□ 0.65
NDC1-201ENST00000371429 RTF1Q92541 710 aaKnown RBP19.08■□□□□ 0.65
NDC1-201ENST00000371429 MS4A1P11836 297 aa19.07■□□□□ 0.64
NDC1-201ENST00000371429 OS9Q13438 667 aaPredicted RBP19.07■□□□□ 0.64
NDC1-201ENST00000371429 CASC1Q6TDU7 716 aa19.07■□□□□ 0.64
NDC1-201ENST00000371429 BECN1Q14457 450 aa19.03■□□□□ 0.64
NDC1-201ENST00000371429 NGDNQ8NEJ9 315 aaKnown RBP19.01■□□□□ 0.63
NDC1-201ENST00000371429 EIF3AQ14152 1382 aaKnown RBP19.01■□□□□ 0.63
NDC1-201ENST00000371429 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
NDC1-201ENST00000371429 KTN1Q86UP2 1357 aaKnown RBP19■□□□□ 0.63
NDC1-201ENST00000371429 U2AF1L5P0DN76 240 aaPredicted RBP19■□□□□ 0.63
NDC1-201ENST00000371429 U2AF1Q01081 240 aaKnown RBP eCLIP19■□□□□ 0.63
NDC1-201ENST00000371429 GOLGA2Q08379 1002 aa19■□□□□ 0.63
NDC1-201ENST00000371429 TERF2IPQ9NYB0 399 aa18.99■□□□□ 0.63
NDC1-201ENST00000371429 CCDC9Q9Y3X0 531 aaKnown RBP18.99■□□□□ 0.63
NDC1-201ENST00000371429 EIF5BO60841 1220 aaKnown RBP18.99■□□□□ 0.63
NDC1-201ENST00000371429 L3MBTL2Q969R5 705 aa18.98■□□□□ 0.63
NDC1-201ENST00000371429 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
NDC1-201ENST00000371429 NCLP19338 710 aaKnown RBP18.96■□□□□ 0.63
NDC1-201ENST00000371429 FAM69CQ0P6D2 419 aa18.96■□□□□ 0.63
NDC1-201ENST00000371429 NUTM2FA1L443 756 aa18.96■□□□□ 0.63
NDC1-201ENST00000371429 RGS3P49796 1198 aa18.96■□□□□ 0.63
NDC1-201ENST00000371429 NBR1Q14596 966 aa18.95■□□□□ 0.62
NDC1-201ENST00000371429 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
NDC1-201ENST00000371429 DDRGK1Q96HY6 314 aa18.94■□□□□ 0.62
NDC1-201ENST00000371429 NCAPD3P42695 1498 aa18.94■□□□□ 0.62
NDC1-201ENST00000371429 TRAK1Q9UPV9 953 aa18.93■□□□□ 0.62
NDC1-201ENST00000371429 RUSC2Q8N2Y8 1516 aa18.93■□□□□ 0.62
NDC1-201ENST00000371429 CDK11BP21127 795 aaKnown RBP18.92■□□□□ 0.62
NDC1-201ENST00000371429 IGF1RP08069 1367 aa18.92■□□□□ 0.62
NDC1-201ENST00000371429 ZNF330Q9Y3S2 320 aaPredicted RBP18.92■□□□□ 0.62
NDC1-201ENST00000371429 CALD1Q05682 793 aaKnown RBP18.9■□□□□ 0.62
NDC1-201ENST00000371429 GOLGA6L22H0YM25 854 aa18.9■□□□□ 0.62
NDC1-201ENST00000371429 KCNJ4P48050 445 aa18.9■□□□□ 0.62
NDC1-201ENST00000371429 FGD1P98174 961 aa18.89■□□□□ 0.61
NDC1-201ENST00000371429 AQRO60306 1485 aaKnown RBP eCLIP18.89■□□□□ 0.611e-6■■■□□ 18
NDC1-201ENST00000371429 VGFO15240 615 aaPredicted RBP18.89■□□□□ 0.61
NDC1-201ENST00000371429 RALBP1Q15311 655 aa18.89■□□□□ 0.61
NDC1-201ENST00000371429 CCER2I3L3R5 266 aa18.88■□□□□ 0.61
NDC1-201ENST00000371429 CCDC144AA2RUR9 1427 aa18.88■□□□□ 0.61
NDC1-201ENST00000371429 PPP4R2Q9NY27 417 aa18.88■□□□□ 0.61
NDC1-201ENST00000371429 AMPHP49418 695 aa18.87■□□□□ 0.61
NDC1-201ENST00000371429 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.86■□□□□ 0.61
NDC1-201ENST00000371429 IPO8O15397 1037 aaKnown RBP18.85■□□□□ 0.61
NDC1-201ENST00000371429 ZRSR1Q15695 479 aaKnown RBP18.84■□□□□ 0.61
NDC1-201ENST00000371429 CHMP4AQ9BY43 222 aa18.84■□□□□ 0.61
NDC1-201ENST00000371429 TAOK2Q9UL54 1235 aa18.84■□□□□ 0.61
NDC1-201ENST00000371429 LTV1Q96GA3 475 aaPredicted RBP18.84■□□□□ 0.61
NDC1-201ENST00000371429 UACAQ9BZF9 1416 aa18.81■□□□□ 0.6
NDC1-201ENST00000371429 NAP1L2Q9ULW6 460 aaPredicted RBP18.8■□□□□ 0.6
NDC1-201ENST00000371429 STK31Q9BXU1 1019 aa18.8■□□□□ 0.6
NDC1-201ENST00000371429 TPRNQ4KMQ1 711 aa18.78■□□□□ 0.6
NDC1-201ENST00000371429 ST20-MTHFSA0A0A6YYL1 179 aa18.77■□□□□ 0.6
NDC1-201ENST00000371429 APBB1O00213 710 aa18.77■□□□□ 0.59
NDC1-201ENST00000371429 AEBP2Q6ZN18 517 aaPredicted RBP18.77■□□□□ 0.59
NDC1-201ENST00000371429 B4GALNT3Q6L9W6 998 aa18.76■□□□□ 0.59
NDC1-201ENST00000371429 ANP32EQ9BTT0 268 aa18.76■□□□□ 0.59
NDC1-201ENST00000371429 TULP1O00294 542 aaPredicted RBP18.75■□□□□ 0.59
NDC1-201ENST00000371429 GRIN2BQ13224 1484 aa18.74■□□□□ 0.59
NDC1-201ENST00000371429 NLRP13Q86W25 1043 aa18.74■□□□□ 0.59
NDC1-201ENST00000371429 TMX4Q9H1E5 349 aaPredicted RBP18.73■□□□□ 0.59
NDC1-201ENST00000371429 MINK1Q8N4C8 1332 aaPredicted RBP18.73■□□□□ 0.59
NDC1-201ENST00000371429 EVC2Q86UK5 1308 aa18.73■□□□□ 0.59
NDC1-201ENST00000371429 MYOM3Q5VTT5 1437 aa18.73■□□□□ 0.59
NDC1-201ENST00000371429 LMOD3Q0VAK6 560 aa18.72■□□□□ 0.59
NDC1-201ENST00000371429 ZNF644Q9H582 1327 aaPredicted RBP18.71■□□□□ 0.59
NDC1-201ENST00000371429 ITPRIPQ8IWB1 547 aa18.71■□□□□ 0.59
NDC1-201ENST00000371429 COG3Q96JB2 828 aa18.71■□□□□ 0.59
NDC1-201ENST00000371429 HSP90AB1P08238 724 aaKnown RBP18.7■□□□□ 0.58
NDC1-201ENST00000371429 ISY1Q9ULR0 285 aaKnown RBP18.7■□□□□ 0.58
NDC1-201ENST00000371429 CCDC146Q8IYE0 955 aa18.69■□□□□ 0.58
NDC1-201ENST00000371429 RCAN3Q9UKA8 241 aa18.69■□□□□ 0.58
NDC1-201ENST00000371429 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.69■□□□□ 0.58
NDC1-201ENST00000371429 EVA1CP58658 441 aa18.69■□□□□ 0.58
NDC1-201ENST00000371429 PANK3Q9H999 370 aa18.68■□□□□ 0.58
NDC1-201ENST00000371429 MCCP23508 829 aa18.68■□□□□ 0.58
NDC1-201ENST00000371429 HDAC5Q9UQL6 1122 aa18.68■□□□□ 0.58
NDC1-201ENST00000371429 CHMP3Q9Y3E7 222 aa18.68■□□□□ 0.58
NDC1-201ENST00000371429 NESP48681 1621 aa18.68■□□□□ 0.58
NDC1-201ENST00000371429 SMC4Q9NTJ3 1288 aa18.68■□□□□ 0.58
NDC1-201ENST00000371429 KIF15Q9NS87 1388 aa18.67■□□□□ 0.58
NDC1-201ENST00000371429 TAF7LQ5H9L4 462 aa18.66■□□□□ 0.58
NDC1-201ENST00000371429 CGNL1Q0VF96 1302 aa18.66■□□□□ 0.58
NDC1-201ENST00000371429 PRG4Q92954 1404 aaPredicted RBP18.66■□□□□ 0.58
NDC1-201ENST00000371429 GORABQ5T7V8 394 aa18.65■□□□□ 0.58
NDC1-201ENST00000371429 CFAP44Q96MT7 982 aa18.65■□□□□ 0.58
NDC1-201ENST00000371429 AFAP1Q8N556 730 aa18.65■□□□□ 0.58
NDC1-201ENST00000371429 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
NDC1-201ENST00000371429 GTF2E1P29083 439 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms