RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 ZMYM4Q5VZL5 1548 aa17.85■□□□□ 0.45
EXOSC1-202ENST00000370885 CDC42BPBQ9Y5S2 1711 aa17.84■□□□□ 0.45
EXOSC1-202ENST00000370885 POGZQ7Z3K3 1410 aa17.83■□□□□ 0.45
EXOSC1-202ENST00000370885 EFCAB2Q5VUJ9 269 aa17.83■□□□□ 0.44
EXOSC1-202ENST00000370885 BCORL1Q5H9F3 1711 aa17.82■□□□□ 0.44
EXOSC1-202ENST00000370885 LOC105371045A0A1W2PR82 267 aa17.82■□□□□ 0.44
EXOSC1-202ENST00000370885 ARHGAP5Q13017 1502 aa17.8■□□□□ 0.44
EXOSC1-202ENST00000370885 CEP162Q5TB80 1403 aa17.8■□□□□ 0.44
EXOSC1-202ENST00000370885 ZFYVE16Q7Z3T8 1539 aa17.79■□□□□ 0.44
EXOSC1-202ENST00000370885 ARHGEF12Q9NZN5 1544 aa17.79■□□□□ 0.44
EXOSC1-202ENST00000370885 AFAP1Q8N556 730 aa17.79■□□□□ 0.44
EXOSC1-202ENST00000370885 PREX2Q70Z35 1606 aa17.78■□□□□ 0.44
EXOSC1-202ENST00000370885 HECW2Q9P2P5 1572 aa17.78■□□□□ 0.44
EXOSC1-202ENST00000370885 CDC42BPAQ5VT25 1732 aa17.78■□□□□ 0.44
EXOSC1-202ENST00000370885 ARID4BQ4LE39 1312 aaPredicted RBP17.77■□□□□ 0.44
EXOSC1-202ENST00000370885 PTPRMP28827 1452 aa17.77■□□□□ 0.44
EXOSC1-202ENST00000370885 MADDQ8WXG6 1647 aa17.77■□□□□ 0.44
EXOSC1-202ENST00000370885 MAGI2Q86UL8 1455 aa17.76■□□□□ 0.43
EXOSC1-202ENST00000370885 TRAPPC8Q9Y2L5 1435 aa17.74■□□□□ 0.43
EXOSC1-202ENST00000370885 KDM5CP41229 1560 aa17.74■□□□□ 0.43
EXOSC1-202ENST00000370885 ABCC1P33527 1531 aa17.72■□□□□ 0.43
EXOSC1-202ENST00000370885 GPATCH8Q9UKJ3 1502 aaKnown RBP17.72■□□□□ 0.43
EXOSC1-202ENST00000370885 ATP10AO60312 1499 aa17.71■□□□□ 0.43
EXOSC1-202ENST00000370885 ZNF518AQ6AHZ1 1483 aa17.71■□□□□ 0.43
EXOSC1-202ENST00000370885 RIMS1Q86UR5 1692 aaKnown RBP17.71■□□□□ 0.42
EXOSC1-202ENST00000370885 ITSN2Q9NZM3 1697 aa17.71■□□□□ 0.42
EXOSC1-202ENST00000370885 SAMD9LQ8IVG5 1584 aa17.7■□□□□ 0.42
EXOSC1-202ENST00000370885 MLECQ14165 292 aa17.69■□□□□ 0.42
EXOSC1-202ENST00000370885 DIP2CQ9Y2E4 1556 aa17.68■□□□□ 0.42
EXOSC1-202ENST00000370885 C9orf84Q5VXU9 1444 aa17.67■□□□□ 0.42
EXOSC1-202ENST00000370885 ABCA6Q8N139 1617 aa17.67■□□□□ 0.42
EXOSC1-202ENST00000370885 ZNF777Q9ULD5 760 aaPredicted RBP17.66■□□□□ 0.42
EXOSC1-202ENST00000370885 MLH3Q9UHC1 1453 aa17.66■□□□□ 0.42
EXOSC1-202ENST00000370885 MTUS2Q5JR59 1369 aa17.66■□□□□ 0.42
EXOSC1-202ENST00000370885 HNRNPMP52272 730 aaKnown RBP eCLIP17.65■□□□□ 0.42
EXOSC1-202ENST00000370885 KIDINS220Q9ULH0 1771 aa17.65■□□□□ 0.42
EXOSC1-202ENST00000370885 TIAM1Q13009 1591 aa17.64■□□□□ 0.41
EXOSC1-202ENST00000370885 SYCP2Q9BX26 1530 aa17.63■□□□□ 0.41
EXOSC1-202ENST00000370885 ZNF644Q9H582 1327 aaPredicted RBP17.63■□□□□ 0.41
EXOSC1-202ENST00000370885 FER1L4A9Z1Z3 1794 aa17.62■□□□□ 0.41
EXOSC1-202ENST00000370885 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
EXOSC1-202ENST00000370885 CCNB3Q8WWL7 1395 aa17.62■□□□□ 0.41
EXOSC1-202ENST00000370885 CFDP1Q9UEE9 299 aaPredicted RBP17.61■□□□□ 0.41
EXOSC1-202ENST00000370885 EHBP1L1Q8N3D4 1523 aa17.61■□□□□ 0.41
EXOSC1-202ENST00000370885 MYT1LQ9UL68 1186 aa17.6■□□□□ 0.41
EXOSC1-202ENST00000370885 LMTK3Q96Q04 1460 aa17.6■□□□□ 0.41
EXOSC1-202ENST00000370885 REREQ9P2R6 1566 aa17.6■□□□□ 0.41
EXOSC1-202ENST00000370885 VPS8Q8N3P4 1428 aa17.58■□□□□ 0.41
EXOSC1-202ENST00000370885 KIAA1107Q9UPP5 1409 aa17.57■□□□□ 0.4
EXOSC1-202ENST00000370885 CEBPAP49715 358 aaPredicted RBP17.57■□□□□ 0.4
EXOSC1-202ENST00000370885 NCOA2Q15596 1464 aa17.56■□□□□ 0.4
EXOSC1-202ENST00000370885 MBD5Q9P267 1494 aa17.56■□□□□ 0.4
EXOSC1-202ENST00000370885 AGLP35573 1532 aa17.55■□□□□ 0.4
EXOSC1-202ENST00000370885 SPAG9O60271 1321 aaKnown RBP17.54■□□□□ 0.4
EXOSC1-202ENST00000370885 KANK4Q5T7N3 995 aaPredicted RBP17.54■□□□□ 0.4
EXOSC1-202ENST00000370885 INO80Q9ULG1 1556 aaPredicted RBP17.53■□□□□ 0.4
EXOSC1-202ENST00000370885 PLEKHH2Q8IVE3 1493 aa17.52■□□□□ 0.4
EXOSC1-202ENST00000370885 HSPA2P54652 639 aa17.52■□□□□ 0.4
EXOSC1-202ENST00000370885 SUPT6HQ7KZ85 1726 aaKnown RBP17.52■□□□□ 0.39
EXOSC1-202ENST00000370885 ATP7AQ04656 1500 aa17.52■□□□□ 0.39
EXOSC1-202ENST00000370885 LRRC9Q6ZRR7 1453 aa17.51■□□□□ 0.39
EXOSC1-202ENST00000370885 PLXNC1O60486 1568 aa17.48■□□□□ 0.39
EXOSC1-202ENST00000370885 C3P01024 1663 aa17.47■□□□□ 0.39
EXOSC1-202ENST00000370885 A2MP01023 1474 aa17.46■□□□□ 0.39
EXOSC1-202ENST00000370885 CAMSAP2Q08AD1 1489 aa17.46■□□□□ 0.39
EXOSC1-202ENST00000370885 MAP3K1Q13233 1512 aa17.46■□□□□ 0.39
EXOSC1-202ENST00000370885 ILDR1Q86SU0 546 aaPredicted RBP17.45■□□□□ 0.38
EXOSC1-202ENST00000370885 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
EXOSC1-202ENST00000370885 ADGBQ8N7X0 1667 aa17.42■□□□□ 0.38
EXOSC1-202ENST00000370885 RTEL1-TNFRSF6BF6WH68 1400 aa17.41■□□□□ 0.38
EXOSC1-202ENST00000370885 CCDC141Q6ZP82 1450 aa17.4■□□□□ 0.38
EXOSC1-202ENST00000370885 SETD1BQ9UPS6 1966 aaKnown RBP17.39■□□□□ 0.37
EXOSC1-202ENST00000370885 ARHGEF5Q12774 1597 aa17.38■□□□□ 0.37
EXOSC1-202ENST00000370885 GGT6Q6P531 493 aa17.38■□□□□ 0.37
EXOSC1-202ENST00000370885 CLTCQ00610 1675 aaKnown RBP17.38■□□□□ 0.37
EXOSC1-202ENST00000370885 ZMYM3Q14202 1370 aa17.38■□□□□ 0.37
EXOSC1-202ENST00000370885 DHX29Q7Z478 1369 aaKnown RBP17.37■□□□□ 0.37
EXOSC1-202ENST00000370885 CNTLNQ9NXG0 1405 aa17.37■□□□□ 0.37
EXOSC1-202ENST00000370885 MROH2AA6NES4 1674 aa17.36■□□□□ 0.37
EXOSC1-202ENST00000370885 STRCQ7RTU9 1775 aa17.36■□□□□ 0.37
EXOSC1-202ENST00000370885 MYOM3Q5VTT5 1437 aa17.36■□□□□ 0.37
EXOSC1-202ENST00000370885 ESF1Q9H501 851 aaKnown RBP17.35■□□□□ 0.37
EXOSC1-202ENST00000370885 UHRF1BP1Q6BDS2 1440 aa17.34■□□□□ 0.37
EXOSC1-202ENST00000370885 RSPH4AQ5TD94 716 aa17.33■□□□□ 0.36
EXOSC1-202ENST00000370885 MIA2Q96PC5 1412 aa17.32■□□□□ 0.36
EXOSC1-202ENST00000370885 PTPRKQ15262 1439 aa17.31■□□□□ 0.36
EXOSC1-202ENST00000370885 KIF3BO15066 747 aa17.31■□□□□ 0.36
EXOSC1-202ENST00000370885 MAST1Q9Y2H9 1570 aa17.3■□□□□ 0.36
EXOSC1-202ENST00000370885 NPATQ14207 1427 aa17.3■□□□□ 0.36
EXOSC1-202ENST00000370885 TSPY4P0CV99 314 aa17.28■□□□□ 0.36
EXOSC1-202ENST00000370885 TSPY10P0CW01 314 aa17.28■□□□□ 0.36
EXOSC1-202ENST00000370885 PTPN23Q9H3S7 1636 aa17.26■□□□□ 0.35
EXOSC1-202ENST00000370885 PPP6R1Q9UPN7 881 aa17.26■□□□□ 0.35
EXOSC1-202ENST00000370885 ABCC5O15440 1437 aa17.26■□□□□ 0.35
EXOSC1-202ENST00000370885 APLP2Q06481 763 aa17.25■□□□□ 0.35
EXOSC1-202ENST00000370885 FBXO31Q5XUX0 539 aaPredicted RBP17.25■□□□□ 0.35
EXOSC1-202ENST00000370885 FGD6Q6ZV73 1430 aa17.24■□□□□ 0.35
EXOSC1-202ENST00000370885 MYO3AQ8NEV4 1616 aa17.24■□□□□ 0.35
EXOSC1-202ENST00000370885 TCOF1Q13428 1488 aaKnown RBP17.23■□□□□ 0.35
EXOSC1-202ENST00000370885 NCOA1Q15788 1441 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms