RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 CCDC7Q96M83 1385 aa22.92■■□□□ 1.26
DKC1-201ENST00000369550 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
DKC1-201ENST00000369550 ERCC6Q03468 1493 aa22.91■■□□□ 1.26
DKC1-201ENST00000369550 RRP7BPQ9NSQ0 103 aa22.9■■□□□ 1.26
DKC1-201ENST00000369550 IQGAP2Q13576 1575 aa22.88■■□□□ 1.25
DKC1-201ENST00000369550 AKNAQ7Z591 1439 aa22.88■■□□□ 1.25
DKC1-201ENST00000369550 ANO8Q9HCE9 1232 aaPredicted RBP22.88■■□□□ 1.25
DKC1-201ENST00000369550 THOC2Q8NI27 1593 aaKnown RBP22.88■■□□□ 1.25
DKC1-201ENST00000369550 NCOA1Q15788 1441 aa22.87■■□□□ 1.25
DKC1-201ENST00000369550 CHIC2Q9UKJ5 165 aa22.86■■□□□ 1.25
DKC1-201ENST00000369550 MYOM3Q5VTT5 1437 aa22.86■■□□□ 1.25
DKC1-201ENST00000369550 L3MBTL2Q969R5 705 aa22.85■■□□□ 1.25
DKC1-201ENST00000369550 SMG6Q86US8 1419 aaKnown RBP22.84■■□□□ 1.25
DKC1-201ENST00000369550 LRRIQ1Q96JM4 1722 aa22.83■■□□□ 1.25
DKC1-201ENST00000369550 EIF4G3O43432 1585 aaKnown RBP22.83■■□□□ 1.24
DKC1-201ENST00000369550 CNGB1Q14028 1251 aaPredicted RBP22.83■■□□□ 1.24
DKC1-201ENST00000369550 NUDCQ9Y266 331 aa22.82■■□□□ 1.24
DKC1-201ENST00000369550 KIF7Q2M1P5 1343 aa22.78■■□□□ 1.24
DKC1-201ENST00000369550 UGGT2Q9NYU1 1516 aa22.77■■□□□ 1.24
DKC1-201ENST00000369550 MPHOSPH9Q99550 1183 aa22.77■■□□□ 1.24
DKC1-201ENST00000369550 FOXD1Q16676 465 aa22.76■■□□□ 1.23
DKC1-201ENST00000369550 SALL2Q9Y467 1007 aaPredicted RBP22.76■■□□□ 1.23
DKC1-201ENST00000369550 IL27Q8NEV9 243 aa22.75■■□□□ 1.23
DKC1-201ENST00000369550 DENND4BO75064 1496 aaPredicted RBP22.75■■□□□ 1.23
DKC1-201ENST00000369550 NPM2Q86SE8 214 aaKnown RBP22.75■■□□□ 1.23
DKC1-201ENST00000369550 RNF123Q5XPI4 1314 aa22.74■■□□□ 1.23
DKC1-201ENST00000369550 KIAA0586Q9BVV6 1533 aa22.73■■□□□ 1.23
DKC1-201ENST00000369550 SENP3-EIF4A1A0A087X0R7 540 aa22.73■■□□□ 1.23
DKC1-201ENST00000369550 GRIN2AQ12879 1464 aa22.73■■□□□ 1.23
DKC1-201ENST00000369550 HECW1Q76N89 1606 aa22.73■■□□□ 1.23
DKC1-201ENST00000369550 EHBP1L1Q8N3D4 1523 aa22.72■■□□□ 1.23
DKC1-201ENST00000369550 RTN4Q9NQC3 1192 aaKnown RBP22.72■■□□□ 1.23
DKC1-201ENST00000369550 MAGI1Q96QZ7 1491 aaPredicted RBP22.71■■□□□ 1.23
DKC1-201ENST00000369550 NBPF8Q3BBV2 869 aa22.71■■□□□ 1.23
DKC1-201ENST00000369550 SUPT6HQ7KZ85 1726 aaKnown RBP22.7■■□□□ 1.22
DKC1-201ENST00000369550 POLR3GLQ9BT43 218 aa22.7■■□□□ 1.22
DKC1-201ENST00000369550 NEFMP07197 916 aa22.67■■□□□ 1.22
DKC1-201ENST00000369550 LAS1LQ9Y4W2 734 aaKnown RBP22.67■■□□□ 1.22
DKC1-201ENST00000369550 KIAA0556O60303 1618 aa22.65■■□□□ 1.22
DKC1-201ENST00000369550 GCC2Q8IWJ2 1684 aa22.64■■□□□ 1.21
DKC1-201ENST00000369550 SYNJ2O15056 1496 aa22.64■■□□□ 1.21
DKC1-201ENST00000369550 EPRSP07814 1512 aaKnown RBP22.64■■□□□ 1.21
DKC1-201ENST00000369550 KDM6BO15054 1643 aa22.63■■□□□ 1.21
DKC1-201ENST00000369550 ARHGEF11O15085 1522 aa22.63■■□□□ 1.21
DKC1-201ENST00000369550 MAGI3Q5TCQ9 1506 aa22.63■■□□□ 1.21
DKC1-201ENST00000369550 DISP1Q96F81 1524 aa22.63■■□□□ 1.21
DKC1-201ENST00000369550 SPATA31E1Q6ZUB1 1445 aa22.63■■□□□ 1.21
DKC1-201ENST00000369550 USP35Q9P2H5 1018 aa22.61■■□□□ 1.21
DKC1-201ENST00000369550 RPRD2Q5VT52 1461 aaKnown RBP22.59■■□□□ 1.21
DKC1-201ENST00000369550 TMC1Q8TDI8 760 aa22.59■■□□□ 1.21
DKC1-201ENST00000369550 DHX29Q7Z478 1369 aaKnown RBP22.58■■□□□ 1.21
DKC1-201ENST00000369550 TCERG1O14776 1098 aaKnown RBP22.58■■□□□ 1.21
DKC1-201ENST00000369550 CHMP7Q8WUX9 453 aaPredicted RBP22.58■■□□□ 1.21
DKC1-201ENST00000369550 ANKRD30BQ9BXX2 1392 aa22.58■■□□□ 1.2
DKC1-201ENST00000369550 CEP170Q5SW79 1584 aa22.57■■□□□ 1.2
DKC1-201ENST00000369550 TCOF1Q13428 1488 aaKnown RBP22.56■■□□□ 1.2
DKC1-201ENST00000369550 TEX14Q8IWB6 1497 aa22.56■■□□□ 1.2
DKC1-201ENST00000369550 PDE4AP27815 886 aa22.56■■□□□ 1.2
DKC1-201ENST00000369550 CDK13Q14004 1512 aaKnown RBP22.55■■□□□ 1.2
DKC1-201ENST00000369550 PNISRQ8TF01 805 aaKnown RBP22.55■■□□□ 1.2
DKC1-201ENST00000369550 POLR1AO95602 1720 aaPredicted RBP22.54■■□□□ 1.2
DKC1-201ENST00000369550 EXOC6Q8TAG9 804 aa22.53■■□□□ 1.2
DKC1-201ENST00000369550 SLC4A1APQ9BWU0 796 aaKnown RBP22.53■■□□□ 1.2
DKC1-201ENST00000369550 PPM1GO15355 546 aaPredicted RBP22.53■■□□□ 1.2
DKC1-201ENST00000369550 RRP1P56182 461 aaKnown RBP22.53■■□□□ 1.2
DKC1-201ENST00000369550 ZNF326Q5BKZ1 582 aaKnown RBP22.52■■□□□ 1.2
DKC1-201ENST00000369550 MIA2Q96PC5 1412 aa22.51■■□□□ 1.19
DKC1-201ENST00000369550 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.51■■□□□ 1.19
DKC1-201ENST00000369550 NUP160Q12769 1436 aa22.51■■□□□ 1.19
DKC1-201ENST00000369550 RAPGEF6Q8TEU7 1601 aa22.51■■□□□ 1.19
DKC1-201ENST00000369550 BACH2Q9BYV9 841 aa22.49■■□□□ 1.19
DKC1-201ENST00000369550 USP47Q96K76 1375 aa22.48■■□□□ 1.19
DKC1-201ENST00000369550 NUP153P49790 1475 aaKnown RBP22.47■■□□□ 1.19
DKC1-201ENST00000369550 FBLN2P98095 1184 aa22.47■■□□□ 1.19
DKC1-201ENST00000369550 MS4A1P11836 297 aa22.45■■□□□ 1.19
DKC1-201ENST00000369550 RCAN3Q9UKA8 241 aa22.45■■□□□ 1.19
DKC1-201ENST00000369550 WASHC2CQ9Y4E1 1318 aa22.45■■□□□ 1.18
DKC1-201ENST00000369550 CARMIL2Q6F5E8 1435 aa22.43■■□□□ 1.18
DKC1-201ENST00000369550 ARID3CA6NKF2 412 aa22.43■■□□□ 1.18
DKC1-201ENST00000369550 ARID4BQ4LE39 1312 aaPredicted RBP22.4■■□□□ 1.18
DKC1-201ENST00000369550 DDRGK1Q96HY6 314 aa22.4■■□□□ 1.18
DKC1-201ENST00000369550 JPH4Q96JJ6 628 aa22.4■■□□□ 1.18
DKC1-201ENST00000369550 BRPF3Q9ULD4 1205 aa22.39■■□□□ 1.17
DKC1-201ENST00000369550 ROCK2O75116 1388 aaKnown RBP22.38■■□□□ 1.17
DKC1-201ENST00000369550 BCORL1Q5H9F3 1711 aa22.38■■□□□ 1.17
DKC1-201ENST00000369550 GSE1Q14687 1217 aa22.38■■□□□ 1.17
DKC1-201ENST00000369550 ROCK1Q13464 1354 aa22.37■■□□□ 1.17
DKC1-201ENST00000369550 KIF15Q9NS87 1388 aa22.37■■□□□ 1.17
DKC1-201ENST00000369550 LRPPRCP42704 1394 aaKnown RBP22.37■■□□□ 1.17
DKC1-201ENST00000369550 DAPK1P53355 1430 aa22.36■■□□□ 1.17
DKC1-201ENST00000369550 MYBBP1AQ9BQG0 1328 aaKnown RBP22.36■■□□□ 1.17
DKC1-201ENST00000369550 BRD4O60885 1362 aaPredicted RBP22.35■■□□□ 1.17
DKC1-201ENST00000369550 PLB1Q6P1J6 1458 aa22.35■■□□□ 1.17
DKC1-201ENST00000369550 DAXXQ9UER7 740 aaPredicted RBP22.34■■□□□ 1.17
DKC1-201ENST00000369550 RALBP1Q15311 655 aa22.32■■□□□ 1.16
DKC1-201ENST00000369550 TROQ12816 1431 aaPredicted RBP22.31■■□□□ 1.16
DKC1-201ENST00000369550 NFKBIBQ15653 356 aa22.3■■□□□ 1.16
DKC1-201ENST00000369550 ABCC5O15440 1437 aa22.3■■□□□ 1.16
DKC1-201ENST00000369550 PDE3BQ13370 1112 aa22.3■■□□□ 1.16
DKC1-201ENST00000369550 CARD11Q9BXL7 1154 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms