RNA–Protein interactions for RNA: ENST00000369528.9

SIKE1-203, Transcript of suppressor of IKBKE 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SIKE1, Length 5,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-203ENST00000369528 ARID3AQ99856 593 aa19.8■□□□□ 0.76
SIKE1-203ENST00000369528 TAOK2Q9UL54 1235 aa19.8■□□□□ 0.76
SIKE1-203ENST00000369528 TNIKQ9UKE5 1360 aa19.78■□□□□ 0.76
SIKE1-203ENST00000369528 RB1CC1Q8TDY2 1594 aa19.77■□□□□ 0.76
SIKE1-203ENST00000369528 SLKQ9H2G2 1235 aaPredicted RBP19.77■□□□□ 0.76
SIKE1-203ENST00000369528 RWDD1Q9H446 243 aaPredicted RBP19.77■□□□□ 0.76
SIKE1-203ENST00000369528 TMF1P82094 1093 aa19.77■□□□□ 0.75
SIKE1-203ENST00000369528 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.75
SIKE1-203ENST00000369528 IPO8O15397 1037 aaKnown RBP19.76■□□□□ 0.75
SIKE1-203ENST00000369528 U2SURPO15042 1029 aaKnown RBP19.75■□□□□ 0.75
SIKE1-203ENST00000369528 KIAA1211Q6ZU35 1233 aa19.74■□□□□ 0.75
SIKE1-203ENST00000369528 NOC3LQ8WTT2 800 aaKnown RBP19.74■□□□□ 0.75
SIKE1-203ENST00000369528 MYO15BQ96JP2 1530 aa19.74■□□□□ 0.75
SIKE1-203ENST00000369528 GNL2Q13823 731 aaKnown RBP19.74■□□□□ 0.75
SIKE1-203ENST00000369528 CSPP1Q1MSJ5 1256 aa19.74■□□□□ 0.75
SIKE1-203ENST00000369528 CALD1Q05682 793 aaKnown RBP19.73■□□□□ 0.75
SIKE1-203ENST00000369528 RCAN3Q9UKA8 241 aa19.72■□□□□ 0.75
SIKE1-203ENST00000369528 PMFBP1Q8TBY8 1022 aa19.7■□□□□ 0.74
SIKE1-203ENST00000369528 BAZ1BQ9UIG0 1483 aaKnown RBP19.7■□□□□ 0.74
SIKE1-203ENST00000369528 PHF14O94880 888 aa19.69■□□□□ 0.74
SIKE1-203ENST00000369528 SETQ01105 290 aaPredicted RBP19.69■□□□□ 0.74
SIKE1-203ENST00000369528 GOLGA2Q08379 1002 aa19.69■□□□□ 0.74
SIKE1-203ENST00000369528 LMOD2Q6P5Q4 547 aa19.68■□□□□ 0.74
SIKE1-203ENST00000369528 VSIG10Q8N0Z9 540 aa19.67■□□□□ 0.74
SIKE1-203ENST00000369528 CCDC34Q96HJ3 373 aa19.67■□□□□ 0.74
SIKE1-203ENST00000369528 DDX11L8A8MPP1 907 aa19.66■□□□□ 0.74
SIKE1-203ENST00000369528 NPHP1O15259 732 aa19.66■□□□□ 0.74
SIKE1-203ENST00000369528 CCNB3Q8WWL7 1395 aa19.66■□□□□ 0.74
SIKE1-203ENST00000369528 KTN1Q86UP2 1357 aaKnown RBP19.65■□□□□ 0.74
SIKE1-203ENST00000369528 KANK1Q14678 1352 aa19.65■□□□□ 0.74
SIKE1-203ENST00000369528 FHAD1B1AJZ9 1412 aa19.64■□□□□ 0.73
SIKE1-203ENST00000369528 RALBP1Q15311 655 aa19.61■□□□□ 0.73
SIKE1-203ENST00000369528 MORC1Q86VD1 984 aa19.61■□□□□ 0.73
SIKE1-203ENST00000369528 A0A0U1RQG5 324 aaPredicted RBP19.61■□□□□ 0.73
SIKE1-203ENST00000369528 MFAP1P55081 439 aaKnown RBP19.6■□□□□ 0.73
SIKE1-203ENST00000369528 CLSTN1O94985 981 aa19.59■□□□□ 0.73
SIKE1-203ENST00000369528 GSE1Q14687 1217 aa19.59■□□□□ 0.73
SIKE1-203ENST00000369528 HDGFP51858 240 aaKnown RBP19.59■□□□□ 0.73
SIKE1-203ENST00000369528 HSPA5P11021 654 aaKnown RBP19.59■□□□□ 0.73
SIKE1-203ENST00000369528 SKOR2Q2VWA4 1001 aaPredicted RBP19.59■□□□□ 0.73
SIKE1-203ENST00000369528 ITPRIPQ8IWB1 547 aa19.57■□□□□ 0.72
SIKE1-203ENST00000369528 TPM3P06753 285 aa19.56■□□□□ 0.72
SIKE1-203ENST00000369528 DCAF11Q8TEB1 546 aa19.56■□□□□ 0.72
SIKE1-203ENST00000369528 GPS2Q13227 327 aa19.55■□□□□ 0.72
SIKE1-203ENST00000369528 PDE3BQ13370 1112 aa19.54■□□□□ 0.72
SIKE1-203ENST00000369528 RTF1Q92541 710 aaKnown RBP19.53■□□□□ 0.72
SIKE1-203ENST00000369528 ST18O60284 1047 aa19.52■□□□□ 0.72
SIKE1-203ENST00000369528 SRPK2P78362 688 aaKnown RBP19.52■□□□□ 0.72
SIKE1-203ENST00000369528 ERCC6Q03468 1493 aa19.51■□□□□ 0.71
SIKE1-203ENST00000369528 APBB1O00213 710 aa19.51■□□□□ 0.71
SIKE1-203ENST00000369528 CHMP4AQ9BY43 222 aa19.51■□□□□ 0.71
SIKE1-203ENST00000369528 ZNF771Q7L3S4 317 aaPredicted RBP19.51■□□□□ 0.71
SIKE1-203ENST00000369528 SETD5Q9C0A6 1442 aa19.5■□□□□ 0.71
SIKE1-203ENST00000369528 HMMRO75330 724 aa19.49■□□□□ 0.71
SIKE1-203ENST00000369528 GPATCH3Q96I76 525 aa19.49■□□□□ 0.71
SIKE1-203ENST00000369528 NACADO15069 1562 aa19.49■□□□□ 0.71
SIKE1-203ENST00000369528 HSP90B1P14625 803 aaKnown RBP19.48■□□□□ 0.71
SIKE1-203ENST00000369528 FANCIQ9NVI1 1328 aa19.48■□□□□ 0.71
SIKE1-203ENST00000369528 KIF3AQ9Y496 699 aa19.48■□□□□ 0.71
SIKE1-203ENST00000369528 HDAC5Q9UQL6 1122 aa19.47■□□□□ 0.71
SIKE1-203ENST00000369528 EIF4G1Q04637 1599 aaKnown RBP19.45■□□□□ 0.7
SIKE1-203ENST00000369528 CALRP27797 417 aaKnown RBP19.45■□□□□ 0.7
SIKE1-203ENST00000369528 TEX35Q5T0J7 233 aa19.45■□□□□ 0.7
SIKE1-203ENST00000369528 DDX49Q9Y6V7 483 aaKnown RBP19.45■□□□□ 0.7
SIKE1-203ENST00000369528 FAM161AQ3B820 660 aa19.44■□□□□ 0.7
SIKE1-203ENST00000369528 HDGFL2Q7Z4V5 671 aaPredicted RBP19.44■□□□□ 0.7
SIKE1-203ENST00000369528 ATP6V1DQ9Y5K8 247 aa19.43■□□□□ 0.7
SIKE1-203ENST00000369528 KIF16BQ96L93 1317 aa19.43■□□□□ 0.7
SIKE1-203ENST00000369528 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.42■□□□□ 0.7
SIKE1-203ENST00000369528 CENPQQ7L2Z9 268 aaPredicted RBP19.42■□□□□ 0.7
SIKE1-203ENST00000369528 CCDC70Q6NSX1 233 aa19.42■□□□□ 0.7
SIKE1-203ENST00000369528 CARMIL1Q5VZK9 1371 aa19.42■□□□□ 0.7
SIKE1-203ENST00000369528 ARHGAP35Q9NRY4 1499 aa19.42■□□□□ 0.7
SIKE1-203ENST00000369528 PHLDB1Q86UU1 1377 aa19.42■□□□□ 0.7
SIKE1-203ENST00000369528 TRIM6-TRIM34B2RNG4 842 aa19.41■□□□□ 0.7
SIKE1-203ENST00000369528 PDE4AP27815 886 aa19.41■□□□□ 0.7
SIKE1-203ENST00000369528 ISY1Q9ULR0 285 aaKnown RBP19.41■□□□□ 0.7
SIKE1-203ENST00000369528 FOXD4L1Q9NU39 408 aa19.41■□□□□ 0.7
SIKE1-203ENST00000369528 GOLGA6L19H0YKK7 550 aa19.41■□□□□ 0.7
SIKE1-203ENST00000369528 SOX12O15370 315 aa19.4■□□□□ 0.7
SIKE1-203ENST00000369528 CHMP4CQ96CF2 233 aa19.4■□□□□ 0.7
SIKE1-203ENST00000369528 SMC4Q9NTJ3 1288 aa19.4■□□□□ 0.7
SIKE1-203ENST00000369528 CEP89Q96ST8 783 aa19.4■□□□□ 0.7
SIKE1-203ENST00000369528 U2AF1L5P0DN76 240 aaPredicted RBP19.4■□□□□ 0.7
SIKE1-203ENST00000369528 U2AF1Q01081 240 aaKnown RBP eCLIP19.4■□□□□ 0.7
SIKE1-203ENST00000369528 CENPJQ9HC77 1338 aaPredicted RBP19.39■□□□□ 0.69
SIKE1-203ENST00000369528 BAZ1AQ9NRL2 1556 aaPredicted RBP19.39■□□□□ 0.69
SIKE1-203ENST00000369528 TSR1Q2NL82 804 aaKnown RBP19.38■□□□□ 0.69
SIKE1-203ENST00000369528 CUX2O14529 1486 aa19.37■□□□□ 0.69
SIKE1-203ENST00000369528 SF3A1Q15459 793 aaKnown RBP19.37■□□□□ 0.69
SIKE1-203ENST00000369528 STK31Q9BXU1 1019 aa19.37■□□□□ 0.69
SIKE1-203ENST00000369528 NCBP3Q53F19 620 aaKnown RBP19.37■□□□□ 0.69
SIKE1-203ENST00000369528 RASSF8Q8NHQ8 419 aa19.36■□□□□ 0.69
SIKE1-203ENST00000369528 BECN2A8MW95 431 aa19.35■□□□□ 0.69
SIKE1-203ENST00000369528 TPM1P09493 284 aa19.35■□□□□ 0.69
SIKE1-203ENST00000369528 SAFB2Q14151 953 aaKnown RBP eCLIP19.35■□□□□ 0.69
SIKE1-203ENST00000369528 MTERF4Q7Z6M4 381 aaKnown RBP19.35■□□□□ 0.69
SIKE1-203ENST00000369528 PKD2Q13563 968 aa19.35■□□□□ 0.69
SIKE1-203ENST00000369528 MAP7D2Q96T17 732 aa19.34■□□□□ 0.69
SIKE1-203ENST00000369528 FAM13BQ9NYF5 915 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms