RNA–Protein interactions for RNA: ENST00000367976.3

CTGF-201, Transcript of connective tissue growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTGF, Length 2,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTGF-201ENST00000367976 EPRSP07814 1512 aaKnown RBP29.68■■■□□ 2.34
CTGF-201ENST00000367976 CDK13Q14004 1512 aaKnown RBP29.66■■■□□ 2.34
CTGF-201ENST00000367976 CHIC2Q9UKJ5 165 aa29.65■■■□□ 2.34
CTGF-201ENST00000367976 KDM6BO15054 1643 aa29.64■■■□□ 2.34
CTGF-201ENST00000367976 WASHC2AQ641Q2 1341 aa29.64■■■□□ 2.34
CTGF-201ENST00000367976 HSPA5P11021 654 aaKnown RBP29.64■■■□□ 2.34
CTGF-201ENST00000367976 EIF4G2P78344 907 aaKnown RBP eCLIP29.59■■■□□ 2.33
CTGF-201ENST00000367976 HNRNPUQ00839 825 aaKnown RBP eCLIP29.58■■■□□ 2.33
CTGF-201ENST00000367976 CARMIL2Q6F5E8 1435 aa29.58■■■□□ 2.33
CTGF-201ENST00000367976 MPHOSPH9Q99550 1183 aa29.57■■■□□ 2.32
CTGF-201ENST00000367976 RBM19Q9Y4C8 960 aaKnown RBP29.56■■■□□ 2.32
CTGF-201ENST00000367976 PLB1Q6P1J6 1458 aa29.56■■■□□ 2.32
CTGF-201ENST00000367976 RAPGEF6Q8TEU7 1601 aa29.55■■■□□ 2.32
CTGF-201ENST00000367976 CNTLNQ9NXG0 1405 aa29.54■■■□□ 2.32
CTGF-201ENST00000367976 PRG4Q92954 1404 aaPredicted RBP29.53■■■□□ 2.32
CTGF-201ENST00000367976 NUP153P49790 1475 aaKnown RBP29.52■■■□□ 2.32
CTGF-201ENST00000367976 ROCK1Q13464 1354 aa29.49■■■□□ 2.31
CTGF-201ENST00000367976 L3MBTL2Q969R5 705 aa29.49■■■□□ 2.31
CTGF-201ENST00000367976 NCOA1Q15788 1441 aa29.47■■■□□ 2.31
CTGF-201ENST00000367976 DAPK1P53355 1430 aa29.45■■■□□ 2.3
CTGF-201ENST00000367976 RPRD2Q5VT52 1461 aaKnown RBP29.45■■■□□ 2.3
CTGF-201ENST00000367976 DNMT1P26358 1616 aaKnown RBP29.44■■■□□ 2.3
CTGF-201ENST00000367976 CCDC7Q96M83 1385 aa29.43■■■□□ 2.3
CTGF-201ENST00000367976 ANKRD30BQ9BXX2 1392 aa29.43■■■□□ 2.3
CTGF-201ENST00000367976 ERCC6L2Q5T890 1561 aa29.41■■■□□ 2.3
CTGF-201ENST00000367976 TEX14Q8IWB6 1497 aa29.4■■■□□ 2.3
CTGF-201ENST00000367976 FOXD1Q16676 465 aa29.39■■■□□ 2.3
CTGF-201ENST00000367976 ERICH6BQ5W0A0 696 aa29.38■■■□□ 2.29
CTGF-201ENST00000367976 ABCC5O15440 1437 aa29.38■■■□□ 2.29
CTGF-201ENST00000367976 PRKRIP1Q9H875 184 aaPredicted RBP29.37■■■□□ 2.29
CTGF-201ENST00000367976 C11orf95C9JLR9 678 aaPredicted RBP29.36■■■□□ 2.29
CTGF-201ENST00000367976 SHROOM2Q13796 1616 aa29.36■■■□□ 2.29
CTGF-201ENST00000367976 POLR1AO95602 1720 aaPredicted RBP29.35■■■□□ 2.29
CTGF-201ENST00000367976 PTPRGP23470 1445 aa29.34■■■□□ 2.29
CTGF-201ENST00000367976 CCDC184Q52MB2 194 aa29.32■■■□□ 2.28
CTGF-201ENST00000367976 ABCA8O94911 1581 aa29.32■■■□□ 2.28
CTGF-201ENST00000367976 SPATA31E1Q6ZUB1 1445 aa29.32■■■□□ 2.28
CTGF-201ENST00000367976 NBPF8Q3BBV2 869 aa29.32■■■□□ 2.28
CTGF-201ENST00000367976 CLASP1Q7Z460 1538 aa29.3■■■□□ 2.28
CTGF-201ENST00000367976 IRX6P78412 446 aaPredicted RBP29.28■■■□□ 2.28
CTGF-201ENST00000367976 CDK11AQ9UQ88 783 aaPredicted RBP29.27■■■□□ 2.28
CTGF-201ENST00000367976 SLC4A1APQ9BWU0 796 aaKnown RBP29.26■■■□□ 2.27
CTGF-201ENST00000367976 ZBED9Q6R2W3 1325 aa29.25■■■□□ 2.27
CTGF-201ENST00000367976 MRS2Q9HD23 443 aa29.25■■■□□ 2.27
CTGF-201ENST00000367976 KIF7Q2M1P5 1343 aa29.24■■■□□ 2.27
CTGF-201ENST00000367976 ZNF644Q9H582 1327 aaPredicted RBP29.24■■■□□ 2.27
CTGF-201ENST00000367976 ATP10BO94823 1461 aa29.21■■■□□ 2.27
CTGF-201ENST00000367976 PPP4R2Q9NY27 417 aa29.21■■■□□ 2.27
CTGF-201ENST00000367976 FAM9BQ8IZU0 186 aa29.21■■■□□ 2.27
CTGF-201ENST00000367976 PZPP20742 1482 aa29.2■■■□□ 2.27
CTGF-201ENST00000367976 FANCIQ9NVI1 1328 aa29.2■■■□□ 2.26
CTGF-201ENST00000367976 KIF14Q15058 1648 aa29.19■■■□□ 2.26
CTGF-201ENST00000367976 TROQ12816 1431 aaPredicted RBP29.19■■■□□ 2.26
CTGF-201ENST00000367976 ADGBQ8N7X0 1667 aa29.18■■■□□ 2.26
CTGF-201ENST00000367976 ITSN2Q9NZM3 1697 aa29.17■■■□□ 2.26
CTGF-201ENST00000367976 CAMSAP2Q08AD1 1489 aa29.16■■■□□ 2.26
CTGF-201ENST00000367976 MBD5Q9P267 1494 aa29.15■■■□□ 2.26
CTGF-201ENST00000367976 MSH5O43196 834 aa29.12■■■□□ 2.25
CTGF-201ENST00000367976 PLEKHD1A6NEE1 506 aa29.11■■■□□ 2.25
CTGF-201ENST00000367976 ADGRL2O95490 1459 aa29.11■■■□□ 2.25
CTGF-201ENST00000367976 KIAA1107Q9UPP5 1409 aa29.1■■■□□ 2.25
CTGF-201ENST00000367976 CROCC2H7BZ55 1655 aa29.09■■■□□ 2.25
CTGF-201ENST00000367976 ADCY10Q96PN6 1610 aa29.08■■■□□ 2.25
CTGF-201ENST00000367976 CFDP1Q9UEE9 299 aaPredicted RBP29.08■■■□□ 2.25
CTGF-201ENST00000367976 GPATCH8Q9UKJ3 1502 aaKnown RBP29.07■■■□□ 2.24
CTGF-201ENST00000367976 DHX29Q7Z478 1369 aaKnown RBP29.05■■■□□ 2.24
CTGF-201ENST00000367976 ZNF777Q9ULD5 760 aaPredicted RBP29.04■■■□□ 2.24
CTGF-201ENST00000367976 USP47Q96K76 1375 aa29.03■■■□□ 2.24
CTGF-201ENST00000367976 BCORL1Q5H9F3 1711 aa29.02■■■□□ 2.24
CTGF-201ENST00000367976 ABCC2Q92887 1545 aa29.02■■■□□ 2.24
CTGF-201ENST00000367976 ARID4BQ4LE39 1312 aaPredicted RBP29.01■■■□□ 2.23
CTGF-201ENST00000367976 KDM5CP41229 1560 aa29■■■□□ 2.23
CTGF-201ENST00000367976 ANKRD30AQ9BXX3 1397 aa28.99■■■□□ 2.23
CTGF-201ENST00000367976 OSCARQ8IYS5 282 aa28.99■■■□□ 2.23
CTGF-201ENST00000367976 SMG6Q86US8 1419 aaKnown RBP28.98■■■□□ 2.23
CTGF-201ENST00000367976 PKD2Q13563 968 aa28.96■■■□□ 2.23
CTGF-201ENST00000367976 B4GALNT3Q6L9W6 998 aa28.95■■■□□ 2.23
CTGF-201ENST00000367976 UHRF1BP1Q6BDS2 1440 aa28.94■■■□□ 2.22
CTGF-201ENST00000367976 ANKRD50Q9ULJ7 1429 aa28.94■■■□□ 2.22
CTGF-201ENST00000367976 ABCC10Q5T3U5 1492 aa28.93■■■□□ 2.22
CTGF-201ENST00000367976 CDC42BPAQ5VT25 1732 aa28.92■■■□□ 2.22
CTGF-201ENST00000367976 RALGAPBQ86X10 1494 aa28.92■■■□□ 2.22
CTGF-201ENST00000367976 ROCK2O75116 1388 aaKnown RBP28.91■■■□□ 2.22
CTGF-201ENST00000367976 ZNF326Q5BKZ1 582 aaKnown RBP28.89■■■□□ 2.22
CTGF-201ENST00000367976 ZCCHC11Q5TAX3 1644 aaKnown RBP28.89■■■□□ 2.22
CTGF-201ENST00000367976 SHANK2Q9UPX8 1470 aa28.89■■■□□ 2.22
CTGF-201ENST00000367976 ARHGEF12Q9NZN5 1544 aa28.89■■■□□ 2.22
CTGF-201ENST00000367976 ERICH6Q7L0X2 663 aa28.88■■■□□ 2.21
CTGF-201ENST00000367976 NUDCQ9Y266 331 aa28.87■■■□□ 2.21
CTGF-201ENST00000367976 RNF123Q5XPI4 1314 aa28.85■■■□□ 2.21
CTGF-201ENST00000367976 POLR3GLQ9BT43 218 aa28.85■■■□□ 2.21
CTGF-201ENST00000367976 KDM5DQ9BY66 1539 aa28.84■■■□□ 2.21
CTGF-201ENST00000367976 C9orf84Q5VXU9 1444 aa28.82■■■□□ 2.2
CTGF-201ENST00000367976 TTC37Q6PGP7 1564 aa28.82■■■□□ 2.2
CTGF-201ENST00000367976 UHRF1BP1LA0JNW5 1464 aa28.82■■■□□ 2.2
CTGF-201ENST00000367976 NUP155O75694 1391 aa28.81■■■□□ 2.2
CTGF-201ENST00000367976 PNISRQ8TF01 805 aaKnown RBP28.78■■■□□ 2.2
CTGF-201ENST00000367976 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.78■■■□□ 2.2
CTGF-201ENST00000367976 CARD11Q9BXL7 1154 aa28.77■■■□□ 2.2
CTGF-201ENST00000367976 KIF15Q9NS87 1388 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms