RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 POGZQ7Z3K3 1410 aa27.06■■□□□ 1.92
PRKN-202ENST00000366892 ARID4BQ4LE39 1312 aaPredicted RBP27.06■■□□□ 1.92
PRKN-202ENST00000366892 ZMYM4Q5VZL5 1548 aa27.04■■□□□ 1.92
PRKN-202ENST00000366892 MAGI2Q86UL8 1455 aa27.03■■□□□ 1.92
PRKN-202ENST00000366892 YEATS2Q9ULM3 1422 aa27.03■■□□□ 1.92
PRKN-202ENST00000366892 ARHGEF40Q8TER5 1519 aa27.02■■□□□ 1.92
PRKN-202ENST00000366892 AFAP1Q8N556 730 aa27■■□□□ 1.91
PRKN-202ENST00000366892 CDC42BPBQ9Y5S2 1711 aa27■■□□□ 1.91
PRKN-202ENST00000366892 ZFYVE16Q7Z3T8 1539 aa26.98■■□□□ 1.91
PRKN-202ENST00000366892 MTUS2Q5JR59 1369 aa26.96■■□□□ 1.91
PRKN-202ENST00000366892 PREX2Q70Z35 1606 aa26.95■■□□□ 1.91
PRKN-202ENST00000366892 ZNF518AQ6AHZ1 1483 aa26.95■■□□□ 1.9
PRKN-202ENST00000366892 GPATCH8Q9UKJ3 1502 aaKnown RBP26.94■■□□□ 1.9
PRKN-202ENST00000366892 ADAMTSL3P82987 1691 aa26.93■■□□□ 1.9
PRKN-202ENST00000366892 ZNF777Q9ULD5 760 aaPredicted RBP26.92■■□□□ 1.9
PRKN-202ENST00000366892 BCORL1Q5H9F3 1711 aa26.91■■□□□ 1.9
PRKN-202ENST00000366892 ARHGEF12Q9NZN5 1544 aa26.91■■□□□ 1.9
PRKN-202ENST00000366892 CDC42BPAQ5VT25 1732 aa26.91■■□□□ 1.9
PRKN-202ENST00000366892 TRAPPC8Q9Y2L5 1435 aa26.89■■□□□ 1.9
PRKN-202ENST00000366892 ATP10AO60312 1499 aa26.89■■□□□ 1.9
PRKN-202ENST00000366892 PTPRMP28827 1452 aa26.88■■□□□ 1.89
PRKN-202ENST00000366892 CFDP1Q9UEE9 299 aaPredicted RBP26.88■■□□□ 1.89
PRKN-202ENST00000366892 MYT1LQ9UL68 1186 aa26.88■■□□□ 1.89
PRKN-202ENST00000366892 CCNB3Q8WWL7 1395 aa26.88■■□□□ 1.89
PRKN-202ENST00000366892 ABCC1P33527 1531 aa26.88■■□□□ 1.89
PRKN-202ENST00000366892 KDM5CP41229 1560 aa26.88■■□□□ 1.89
PRKN-202ENST00000366892 SIGLEC1Q9BZZ2 1709 aa26.85■■□□□ 1.89
PRKN-202ENST00000366892 MLECQ14165 292 aa26.85■■□□□ 1.89
PRKN-202ENST00000366892 C9orf84Q5VXU9 1444 aa26.84■■□□□ 1.89
PRKN-202ENST00000366892 VPS8Q8N3P4 1428 aa26.84■■□□□ 1.89
PRKN-202ENST00000366892 MLH3Q9UHC1 1453 aa26.83■■□□□ 1.89
PRKN-202ENST00000366892 MADDQ8WXG6 1647 aa26.83■■□□□ 1.89
PRKN-202ENST00000366892 HNRNPMP52272 730 aaKnown RBP eCLIP26.82■■□□□ 1.88
PRKN-202ENST00000366892 EHBP1L1Q8N3D4 1523 aa26.82■■□□□ 1.88
PRKN-202ENST00000366892 SAMD9LQ8IVG5 1584 aa26.8■■□□□ 1.88
PRKN-202ENST00000366892 HECW2Q9P2P5 1572 aa26.8■■□□□ 1.88
PRKN-202ENST00000366892 ITSN2Q9NZM3 1697 aa26.79■■□□□ 1.88
PRKN-202ENST00000366892 KIAA1107Q9UPP5 1409 aa26.77■■□□□ 1.88
PRKN-202ENST00000366892 SYCP2Q9BX26 1530 aa26.75■■□□□ 1.87
PRKN-202ENST00000366892 ZNF644Q9H582 1327 aaPredicted RBP26.75■■□□□ 1.87
PRKN-202ENST00000366892 DIP2CQ9Y2E4 1556 aa26.75■■□□□ 1.87
PRKN-202ENST00000366892 TIAM1Q13009 1591 aa26.74■■□□□ 1.87
PRKN-202ENST00000366892 PLEKHH2Q8IVE3 1493 aa26.74■■□□□ 1.87
PRKN-202ENST00000366892 SPAG9O60271 1321 aaKnown RBP26.73■■□□□ 1.87
PRKN-202ENST00000366892 RIMS1Q86UR5 1692 aaKnown RBP26.72■■□□□ 1.87
PRKN-202ENST00000366892 ABCA6Q8N139 1617 aa26.71■■□□□ 1.87
PRKN-202ENST00000366892 NCOA2Q15596 1464 aa26.71■■□□□ 1.87
PRKN-202ENST00000366892 PLPPR3Q6T4P5 718 aa26.7■■□□□ 1.87
PRKN-202ENST00000366892 KIDINS220Q9ULH0 1771 aa26.69■■□□□ 1.86
PRKN-202ENST00000366892 REREQ9P2R6 1566 aa26.69■■□□□ 1.86
PRKN-202ENST00000366892 LRRC9Q6ZRR7 1453 aa26.68■■□□□ 1.86
PRKN-202ENST00000366892 KANK4Q5T7N3 995 aaPredicted RBP26.68■■□□□ 1.86
PRKN-202ENST00000366892 SUPT6HQ7KZ85 1726 aaKnown RBP26.66■■□□□ 1.86
PRKN-202ENST00000366892 MAP3K1Q13233 1512 aa26.64■■□□□ 1.86
PRKN-202ENST00000366892 MBD5Q9P267 1494 aa26.64■■□□□ 1.85
PRKN-202ENST00000366892 AGLP35573 1532 aa26.63■■□□□ 1.85
PRKN-202ENST00000366892 FER1L4A9Z1Z3 1794 aa26.62■■□□□ 1.85
PRKN-202ENST00000366892 ATP7AQ04656 1500 aa26.6■■□□□ 1.85
PRKN-202ENST00000366892 CEBPAP49715 358 aaPredicted RBP26.6■■□□□ 1.85
PRKN-202ENST00000366892 LMTK3Q96Q04 1460 aa26.57■■□□□ 1.84
PRKN-202ENST00000366892 APLP2Q06481 763 aa26.56■■□□□ 1.84
PRKN-202ENST00000366892 RSPH4AQ5TD94 716 aa26.56■■□□□ 1.84
PRKN-202ENST00000366892 INO80Q9ULG1 1556 aaPredicted RBP26.56■■□□□ 1.84
PRKN-202ENST00000366892 ESF1Q9H501 851 aaKnown RBP26.55■■□□□ 1.84
PRKN-202ENST00000366892 CAMSAP2Q08AD1 1489 aa26.54■■□□□ 1.84
PRKN-202ENST00000366892 RTEL1-TNFRSF6BF6WH68 1400 aa26.53■■□□□ 1.84
PRKN-202ENST00000366892 A2MP01023 1474 aa26.52■■□□□ 1.84
PRKN-202ENST00000366892 CCDC141Q6ZP82 1450 aa26.5■■□□□ 1.83
PRKN-202ENST00000366892 HSPA2P54652 639 aa26.49■■□□□ 1.83
PRKN-202ENST00000366892 PLXNC1O60486 1568 aa26.47■■□□□ 1.83
PRKN-202ENST00000366892 TSPY4P0CV99 314 aa26.46■■□□□ 1.83
PRKN-202ENST00000366892 TSPY10P0CW01 314 aa26.46■■□□□ 1.83
PRKN-202ENST00000366892 MYOM3Q5VTT5 1437 aa26.46■■□□□ 1.83
PRKN-202ENST00000366892 GGT6Q6P531 493 aa26.45■■□□□ 1.83
PRKN-202ENST00000366892 MIA2Q96PC5 1412 aa26.44■■□□□ 1.82
PRKN-202ENST00000366892 CNTLNQ9NXG0 1405 aa26.44■■□□□ 1.82
PRKN-202ENST00000366892 DHX29Q7Z478 1369 aaKnown RBP26.44■■□□□ 1.82
PRKN-202ENST00000366892 ARHGEF5Q12774 1597 aa26.42■■□□□ 1.82
PRKN-202ENST00000366892 ADGBQ8N7X0 1667 aa26.41■■□□□ 1.82
PRKN-202ENST00000366892 ZMYM3Q14202 1370 aa26.4■■□□□ 1.82
PRKN-202ENST00000366892 PPP6R1Q9UPN7 881 aa26.39■■□□□ 1.81
PRKN-202ENST00000366892 C3P01024 1663 aa26.39■■□□□ 1.81
PRKN-202ENST00000366892 SETD1BQ9UPS6 1966 aaKnown RBP26.37■■□□□ 1.81
PRKN-202ENST00000366892 KIF3BO15066 747 aa26.35■■□□□ 1.81
PRKN-202ENST00000366892 PREX1Q8TCU6 1659 aa26.35■■□□□ 1.81
PRKN-202ENST00000366892 UHRF1BP1Q6BDS2 1440 aa26.35■■□□□ 1.81
PRKN-202ENST00000366892 MROH2AA6NES4 1674 aa26.3■■□□□ 1.8
PRKN-202ENST00000366892 CLTCQ00610 1675 aaKnown RBP26.28■■□□□ 1.8
PRKN-202ENST00000366892 NPATQ14207 1427 aa26.28■■□□□ 1.8
PRKN-202ENST00000366892 MAST1Q9Y2H9 1570 aa26.27■■□□□ 1.8
PRKN-202ENST00000366892 FGD6Q6ZV73 1430 aa26.26■■□□□ 1.8
PRKN-202ENST00000366892 ILDR1Q86SU0 546 aaPredicted RBP26.25■■□□□ 1.79
PRKN-202ENST00000366892 PTPN23Q9H3S7 1636 aa26.25■■□□□ 1.79
PRKN-202ENST00000366892 ABCC5O15440 1437 aa26.24■■□□□ 1.79
PRKN-202ENST00000366892 PTPRKQ15262 1439 aa26.23■■□□□ 1.79
PRKN-202ENST00000366892 WASHC2CQ9Y4E1 1318 aa26.23■■□□□ 1.79
PRKN-202ENST00000366892 TCOF1Q13428 1488 aaKnown RBP26.21■■□□□ 1.79
PRKN-202ENST00000366892 DAPK1P53355 1430 aa26.17■■□□□ 1.78
PRKN-202ENST00000366892 SHANK2Q9UPX8 1470 aa26.17■■□□□ 1.78
PRKN-202ENST00000366892 RRP7BPQ9NSQ0 103 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms