RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.55□□□□□ -1.36
RNU6-428P-201ENST00000362942 POTEFA5A3E0 1075 aa6.54□□□□□ -1.36
RNU6-428P-201ENST00000362942 POTEMA6NI47 508 aa6.54□□□□□ -1.36
RNU6-428P-201ENST00000362942 P3H3Q8IVL6 736 aa6.53□□□□□ -1.36
RNU6-428P-201ENST00000362942 SCUBE2Q9NQ36 999 aa6.53□□□□□ -1.36
RNU6-428P-201ENST00000362942 CADPS2Q86UW7 1296 aa6.52□□□□□ -1.37
RNU6-428P-201ENST00000362942 DDX27Q96GQ7 796 aaKnown RBP6.52□□□□□ -1.37
RNU6-428P-201ENST00000362942 GPHNQ9NQX3 736 aaPredicted RBP6.52□□□□□ -1.37
RNU6-428P-201ENST00000362942 LARP6Q9BRS8 491 aaKnown RBP6.51□□□□□ -1.37
RNU6-428P-201ENST00000362942 CRISPLD2Q9H0B8 497 aa6.51□□□□□ -1.37
RNU6-428P-201ENST00000362942 KDM2AQ9Y2K7 1162 aa6.5□□□□□ -1.37
RNU6-428P-201ENST00000362942 MFSD10Q14728 455 aa6.49□□□□□ -1.37
RNU6-428P-201ENST00000362942 NCKAP5LQ9HCH0 1330 aa6.49□□□□□ -1.37
RNU6-428P-201ENST00000362942 FOXK1P85037 733 aa6.48□□□□□ -1.37
RNU6-428P-201ENST00000362942 E2F4Q16254 413 aa6.48□□□□□ -1.37
RNU6-428P-201ENST00000362942 PPP1R15BQ5SWA1 713 aa6.48□□□□□ -1.37
RNU6-428P-201ENST00000362942 POTEGQ6S5H5 508 aa6.48□□□□□ -1.37
RNU6-428P-201ENST00000362942 C2orf72A6NCS6 295 aa6.46□□□□□ -1.38
RNU6-428P-201ENST00000362942 KIF3CO14782 793 aa6.46□□□□□ -1.38
RNU6-428P-201ENST00000362942 PCDH10Q9P2E7 1040 aa6.46□□□□□ -1.38
RNU6-428P-201ENST00000362942 DSG2Q14126 1118 aa6.44□□□□□ -1.38
RNU6-428P-201ENST00000362942 PLPP6Q8IY26 295 aa6.44□□□□□ -1.38
RNU6-428P-201ENST00000362942 NBR1Q14596 966 aa6.43□□□□□ -1.38
RNU6-428P-201ENST00000362942 SLAIN1Q8ND83 568 aa6.43□□□□□ -1.38
RNU6-428P-201ENST00000362942 BCANQ96GW7 911 aa6.43□□□□□ -1.38
RNU6-428P-201ENST00000362942 POTEB2H3BUK9 544 aa6.42□□□□□ -1.38
RNU6-428P-201ENST00000362942 SNPHO15079 494 aa6.42□□□□□ -1.38
RNU6-428P-201ENST00000362942 TBC1D12O60347 775 aa6.42□□□□□ -1.38
RNU6-428P-201ENST00000362942 ARHGEF1Q92888 912 aaKnown RBP6.42□□□□□ -1.38
RNU6-428P-201ENST00000362942 RIMBP2O15034 1052 aa6.41□□□□□ -1.38
RNU6-428P-201ENST00000362942 CAMK2BQ13554 666 aa6.41□□□□□ -1.38
RNU6-428P-201ENST00000362942 TMEM92Q6UXU6 159 aa6.41□□□□□ -1.38
RNU6-428P-201ENST00000362942 ZNF316A6NFI3 1004 aaPredicted RBP6.4□□□□□ -1.38
RNU6-428P-201ENST00000362942 POTEJP0CG39 1038 aa6.4□□□□□ -1.38
RNU6-428P-201ENST00000362942 DOK7Q18PE1 504 aa6.4□□□□□ -1.38
RNU6-428P-201ENST00000362942 KCNV2Q8TDN2 545 aa6.4□□□□□ -1.38
RNU6-428P-201ENST00000362942 ARIH1Q9Y4X5 557 aaPredicted RBP6.39□□□□□ -1.39
RNU6-428P-201ENST00000362942 TULP1O00294 542 aaPredicted RBP6.38□□□□□ -1.39
RNU6-428P-201ENST00000362942 SLC34A2O95436 690 aa6.38□□□□□ -1.39
RNU6-428P-201ENST00000362942 MAP3K9P80192 1104 aa6.38□□□□□ -1.39
RNU6-428P-201ENST00000362942 SPDYE16A6NNV3 312 aaPredicted RBP6.37□□□□□ -1.39
RNU6-428P-201ENST00000362942 ZNF710Q8N1W2 664 aa6.36□□□□□ -1.39
RNU6-428P-201ENST00000362942 ZSWIM6Q9HCJ5 1215 aa6.36□□□□□ -1.39
RNU6-428P-201ENST00000362942 SMYD5Q6GMV2 418 aa6.35□□□□□ -1.39
RNU6-428P-201ENST00000362942 PTCD2Q8WV60 388 aaKnown RBP6.35□□□□□ -1.39
RNU6-428P-201ENST00000362942 OTUD5Q96G74 571 aa6.35□□□□□ -1.39
RNU6-428P-201ENST00000362942 OXER1Q8TDS5 423 aa6.34□□□□□ -1.39
RNU6-428P-201ENST00000362942 UPF1Q92900 1129 aaKnown RBP eCLIP6.34□□□□□ -1.39
RNU6-428P-201ENST00000362942 EMILIN3Q9NT22 766 aa6.34□□□□□ -1.39
RNU6-428P-201ENST00000362942 DPYSL4O14531 572 aa6.33□□□□□ -1.4
RNU6-428P-201ENST00000362942 PDIA6Q15084 440 aa6.32□□□□□ -1.4
RNU6-428P-201ENST00000362942 PCDHGA4Q9Y5G9 962 aa6.31□□□□□ -1.4
RNU6-428P-201ENST00000362942 EVI5O60447 810 aa6.3□□□□□ -1.4
RNU6-428P-201ENST00000362942 HOXB3P14651 431 aaPredicted RBP6.28□□□□□ -1.4
RNU6-428P-201ENST00000362942 PSDA5PKW4 1024 aaPredicted RBP6.27□□□□□ -1.41
RNU6-428P-201ENST00000362942 TESPA1A2RU30 521 aaPredicted RBP6.26□□□□□ -1.41
RNU6-428P-201ENST00000362942 SEMA3EO15041 775 aa6.26□□□□□ -1.41
RNU6-428P-201ENST00000362942 PTGER2P43116 358 aa6.26□□□□□ -1.41
RNU6-428P-201ENST00000362942 ARSIQ5FYB1 569 aa6.26□□□□□ -1.41
RNU6-428P-201ENST00000362942 ANO8Q9HCE9 1232 aaPredicted RBP6.26□□□□□ -1.41
RNU6-428P-201ENST00000362942 HOXB1P14653 301 aaPredicted RBP6.25□□□□□ -1.41
RNU6-428P-201ENST00000362942 GPR153Q6NV75 609 aa6.25□□□□□ -1.41
RNU6-428P-201ENST00000362942 EPAS1Q99814 870 aa6.25□□□□□ -1.41
RNU6-428P-201ENST00000362942 NUDT7P0C024 238 aa6.24□□□□□ -1.41
RNU6-428P-201ENST00000362942 GRXCR2A6NFK2 248 aa6.23□□□□□ -1.41
RNU6-428P-201ENST00000362942 PHF14O94880 888 aa6.23□□□□□ -1.41
RNU6-428P-201ENST00000362942 FBXW7Q969H0 707 aa6.22□□□□□ -1.41
RNU6-428P-201ENST00000362942 JPH4Q96JJ6 628 aa6.22□□□□□ -1.41
RNU6-428P-201ENST00000362942 PPP4R3BQ5MIZ7 849 aa6.21□□□□□ -1.42
RNU6-428P-201ENST00000362942 TYW1BQ6NUM6 668 aa6.21□□□□□ -1.42
RNU6-428P-201ENST00000362942 DDX12PQ92771 950 aa6.21□□□□□ -1.42
RNU6-428P-201ENST00000362942 FAM163AQ96GL9 167 aaPredicted RBP6.21□□□□□ -1.42
RNU6-428P-201ENST00000362942 KDM4FA0A1W2PPD8 638 aa6.2□□□□□ -1.42
RNU6-428P-201ENST00000362942 ST18O60284 1047 aa6.2□□□□□ -1.42
RNU6-428P-201ENST00000362942 MLLT3P42568 568 aaPredicted RBP6.2□□□□□ -1.42
RNU6-428P-201ENST00000362942 LMOD2Q6P5Q4 547 aa6.2□□□□□ -1.42
RNU6-428P-201ENST00000362942 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.2□□□□□ -1.42
RNU6-428P-201ENST00000362942 ZNF454Q8N9F8 522 aa6.2□□□□□ -1.42
RNU6-428P-201ENST00000362942 KHSRPQ92945 711 aaKnown RBP eCLIP6.2□□□□□ -1.42
RNU6-428P-201ENST00000362942 KCNH8Q96L42 1107 aa6.2□□□□□ -1.42
RNU6-428P-201ENST00000362942 LHX6Q9UPM6 363 aa6.2□□□□□ -1.42
RNU6-428P-201ENST00000362942 EMP3P54852 163 aa6.19□□□□□ -1.42
RNU6-428P-201ENST00000362942 ZDHHC16Q969W1 377 aa6.19□□□□□ -1.42
RNU6-428P-201ENST00000362942 ERBB3P21860 1342 aa6.19□□□□□ -1.42
RNU6-428P-201ENST00000362942 FOSBP53539 338 aa6.18□□□□□ -1.42
RNU6-428P-201ENST00000362942 OSBPP22059 807 aa6.17□□□□□ -1.42
RNU6-428P-201ENST00000362942 EN1Q05925 392 aaPredicted RBP6.17□□□□□ -1.42
RNU6-428P-201ENST00000362942 GPIHBP1Q8IV16 184 aa6.17□□□□□ -1.42
RNU6-428P-201ENST00000362942 PCDHGA10Q9Y5H3 936 aa6.17□□□□□ -1.42
RNU6-428P-201ENST00000362942 MAP3K7O43318 606 aa6.16□□□□□ -1.42
RNU6-428P-201ENST00000362942 LCE2DQ5TA82 110 aaPredicted RBP6.16□□□□□ -1.42
RNU6-428P-201ENST00000362942 CERKQ8TCT0 537 aa6.16□□□□□ -1.42
RNU6-428P-201ENST00000362942 NUTM2FA1L443 756 aa6.15□□□□□ -1.42
RNU6-428P-201ENST00000362942 RBM26Q5T8P6 1007 aaKnown RBP6.15□□□□□ -1.42
RNU6-428P-201ENST00000362942 FCHSD2O94868 740 aa6.14□□□□□ -1.43
RNU6-428P-201ENST00000362942 PTPREP23469 700 aa6.14□□□□□ -1.43
RNU6-428P-201ENST00000362942 VARS2Q5ST30 1063 aaKnown RBP6.14□□□□□ -1.43
RNU6-428P-201ENST00000362942 RBM33Q96EV2 1170 aaKnown RBP6.14□□□□□ -1.43
RNU6-428P-201ENST00000362942 BCL2L12Q9HB09 334 aa6.14□□□□□ -1.43
RNU6-428P-201ENST00000362942 FAM205CA6NFA0 338 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms