RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 ARHGAP5Q13017 1502 aa26.8■■□□□ 1.88
CKLF-204ENST00000362093 KDM4FA0A1W2PPD8 638 aa26.79■■□□□ 1.88
CKLF-204ENST00000362093 CDC42BPBQ9Y5S2 1711 aa26.78■■□□□ 1.88
CKLF-204ENST00000362093 RICTORQ6R327 1708 aa26.76■■□□□ 1.88
CKLF-204ENST00000362093 GPATCH8Q9UKJ3 1502 aaKnown RBP26.76■■□□□ 1.87
CKLF-204ENST00000362093 PREX2Q70Z35 1606 aa26.76■■□□□ 1.87
CKLF-204ENST00000362093 EHBP1L1Q8N3D4 1523 aa26.75■■□□□ 1.87
CKLF-204ENST00000362093 TIAM1Q13009 1591 aa26.74■■□□□ 1.87
CKLF-204ENST00000362093 CDC42BPAQ5VT25 1732 aa26.73■■□□□ 1.87
CKLF-204ENST00000362093 POGZQ7Z3K3 1410 aa26.73■■□□□ 1.87
CKLF-204ENST00000362093 CCNB3Q8WWL7 1395 aa26.72■■□□□ 1.87
CKLF-204ENST00000362093 MAP3K1Q13233 1512 aa26.72■■□□□ 1.87
CKLF-204ENST00000362093 AFAP1Q8N556 730 aa26.69■■□□□ 1.86
CKLF-204ENST00000362093 CFDP1Q9UEE9 299 aaPredicted RBP26.69■■□□□ 1.86
CKLF-204ENST00000362093 ZMYM4Q5VZL5 1548 aa26.69■■□□□ 1.86
CKLF-204ENST00000362093 LRRC9Q6ZRR7 1453 aa26.68■■□□□ 1.86
CKLF-204ENST00000362093 KANK4Q5T7N3 995 aaPredicted RBP26.67■■□□□ 1.86
CKLF-204ENST00000362093 ZNF777Q9ULD5 760 aaPredicted RBP26.67■■□□□ 1.86
CKLF-204ENST00000362093 MAGI2Q86UL8 1455 aa26.67■■□□□ 1.86
CKLF-204ENST00000362093 ARHGEF12Q9NZN5 1544 aa26.66■■□□□ 1.86
CKLF-204ENST00000362093 ZNF518AQ6AHZ1 1483 aa26.64■■□□□ 1.86
CKLF-204ENST00000362093 ABCC1P33527 1531 aa26.64■■□□□ 1.85
CKLF-204ENST00000362093 NCOA2Q15596 1464 aa26.63■■□□□ 1.85
CKLF-204ENST00000362093 YEATS2Q9ULM3 1422 aa26.63■■□□□ 1.85
CKLF-204ENST00000362093 TRAPPC8Q9Y2L5 1435 aa26.62■■□□□ 1.85
CKLF-204ENST00000362093 SUPT6HQ7KZ85 1726 aaKnown RBP26.6■■□□□ 1.85
CKLF-204ENST00000362093 SAMD9LQ8IVG5 1584 aa26.6■■□□□ 1.85
CKLF-204ENST00000362093 APLP2Q06481 763 aa26.6■■□□□ 1.85
CKLF-204ENST00000362093 ZFYVE16Q7Z3T8 1539 aa26.6■■□□□ 1.85
CKLF-204ENST00000362093 ARHGEF40Q8TER5 1519 aa26.6■■□□□ 1.85
CKLF-204ENST00000362093 KDM5CP41229 1560 aa26.59■■□□□ 1.85
CKLF-204ENST00000362093 KIAA1107Q9UPP5 1409 aa26.59■■□□□ 1.85
CKLF-204ENST00000362093 HNRNPMP52272 730 aaKnown RBP eCLIP26.59■■□□□ 1.85
CKLF-204ENST00000362093 ZNF644Q9H582 1327 aaPredicted RBP26.57■■□□□ 1.84
CKLF-204ENST00000362093 ITSN2Q9NZM3 1697 aa26.56■■□□□ 1.84
CKLF-204ENST00000362093 PLEKHH2Q8IVE3 1493 aa26.55■■□□□ 1.84
CKLF-204ENST00000362093 MLH3Q9UHC1 1453 aa26.55■■□□□ 1.84
CKLF-204ENST00000362093 ARID4BQ4LE39 1312 aaPredicted RBP26.53■■□□□ 1.84
CKLF-204ENST00000362093 ATP10AO60312 1499 aa26.53■■□□□ 1.84
CKLF-204ENST00000362093 SYCP2Q9BX26 1530 aa26.52■■□□□ 1.84
CKLF-204ENST00000362093 MYT1LQ9UL68 1186 aa26.52■■□□□ 1.84
CKLF-204ENST00000362093 HECW2Q9P2P5 1572 aa26.49■■□□□ 1.83
CKLF-204ENST00000362093 MBD5Q9P267 1494 aa26.48■■□□□ 1.83
CKLF-204ENST00000362093 C9orf84Q5VXU9 1444 aa26.48■■□□□ 1.83
CKLF-204ENST00000362093 SPAG9O60271 1321 aaKnown RBP26.46■■□□□ 1.83
CKLF-204ENST00000362093 SIGLEC1Q9BZZ2 1709 aa26.44■■□□□ 1.82
CKLF-204ENST00000362093 ADAMTSL3P82987 1691 aa26.44■■□□□ 1.82
CKLF-204ENST00000362093 BCORL1Q5H9F3 1711 aa26.43■■□□□ 1.82
CKLF-204ENST00000362093 KIDINS220Q9ULH0 1771 aa26.43■■□□□ 1.82
CKLF-204ENST00000362093 DIP2CQ9Y2E4 1556 aa26.42■■□□□ 1.82
CKLF-204ENST00000362093 RSPH4AQ5TD94 716 aa26.42■■□□□ 1.82
CKLF-204ENST00000362093 MYOM3Q5VTT5 1437 aa26.41■■□□□ 1.82
CKLF-204ENST00000362093 CAMSAP2Q08AD1 1489 aa26.41■■□□□ 1.82
CKLF-204ENST00000362093 MIA2Q96PC5 1412 aa26.4■■□□□ 1.82
CKLF-204ENST00000362093 ABCA6Q8N139 1617 aa26.39■■□□□ 1.82
CKLF-204ENST00000362093 REREQ9P2R6 1566 aa26.37■■□□□ 1.81
CKLF-204ENST00000362093 MLECQ14165 292 aa26.36■■□□□ 1.81
CKLF-204ENST00000362093 ATP7AQ04656 1500 aa26.34■■□□□ 1.81
CKLF-204ENST00000362093 RTEL1-TNFRSF6BF6WH68 1400 aa26.34■■□□□ 1.81
CKLF-204ENST00000362093 INO80Q9ULG1 1556 aaPredicted RBP26.33■■□□□ 1.8
CKLF-204ENST00000362093 CCDC141Q6ZP82 1450 aa26.32■■□□□ 1.8
CKLF-204ENST00000362093 AGLP35573 1532 aa26.32■■□□□ 1.8
CKLF-204ENST00000362093 PTPRMP28827 1452 aa26.31■■□□□ 1.8
CKLF-204ENST00000362093 MADDQ8WXG6 1647 aa26.31■■□□□ 1.8
CKLF-204ENST00000362093 ARHGEF5Q12774 1597 aa26.3■■□□□ 1.8
CKLF-204ENST00000362093 TSPY4P0CV99 314 aa26.29■■□□□ 1.8
CKLF-204ENST00000362093 TSPY10P0CW01 314 aa26.29■■□□□ 1.8
CKLF-204ENST00000362093 A2MP01023 1474 aa26.26■■□□□ 1.79
CKLF-204ENST00000362093 FGD6Q6ZV73 1430 aa26.25■■□□□ 1.79
CKLF-204ENST00000362093 PTPN23Q9H3S7 1636 aa26.22■■□□□ 1.79
CKLF-204ENST00000362093 RIMS1Q86UR5 1692 aaKnown RBP26.22■■□□□ 1.79
CKLF-204ENST00000362093 DHX29Q7Z478 1369 aaKnown RBP26.21■■□□□ 1.79
CKLF-204ENST00000362093 TCOF1Q13428 1488 aaKnown RBP26.21■■□□□ 1.79
CKLF-204ENST00000362093 PLXNC1O60486 1568 aa26.2■■□□□ 1.78
CKLF-204ENST00000362093 ADGBQ8N7X0 1667 aa26.19■■□□□ 1.78
CKLF-204ENST00000362093 FER1L4A9Z1Z3 1794 aa26.18■■□□□ 1.78
CKLF-204ENST00000362093 ABCC5O15440 1437 aa26.17■■□□□ 1.78
CKLF-204ENST00000362093 MAST1Q9Y2H9 1570 aa26.16■■□□□ 1.78
CKLF-204ENST00000362093 PPARGC1BQ86YN6 1023 aaKnown RBP26.16■■□□□ 1.78
CKLF-204ENST00000362093 CEBPAP49715 358 aaPredicted RBP26.12■■□□□ 1.77
CKLF-204ENST00000362093 GGT6Q6P531 493 aa26.12■■□□□ 1.77
CKLF-204ENST00000362093 PLPPR3Q6T4P5 718 aa26.12■■□□□ 1.77
CKLF-204ENST00000362093 ESF1Q9H501 851 aaKnown RBP26.12■■□□□ 1.77
CKLF-204ENST00000362093 PPP6R1Q9UPN7 881 aa26.11■■□□□ 1.77
CKLF-204ENST00000362093 DAPK1P53355 1430 aa26.11■■□□□ 1.77
CKLF-204ENST00000362093 KIF3BO15066 747 aa26.09■■□□□ 1.77
CKLF-204ENST00000362093 FAM50AQ14320 339 aaKnown RBP26.09■■□□□ 1.77
CKLF-204ENST00000362093 CNTLNQ9NXG0 1405 aa26.08■■□□□ 1.77
CKLF-204ENST00000362093 SHANK2Q9UPX8 1470 aa26.08■■□□□ 1.77
CKLF-204ENST00000362093 DNMT1P26358 1616 aaKnown RBP26.07■■□□□ 1.76
CKLF-204ENST00000362093 RRP7BPQ9NSQ0 103 aa26.03■■□□□ 1.76
CKLF-204ENST00000362093 ZMYM3Q14202 1370 aa26.03■■□□□ 1.76
CKLF-204ENST00000362093 CROCC2H7BZ55 1655 aa26.03■■□□□ 1.76
CKLF-204ENST00000362093 CHIC2Q9UKJ5 165 aa26.02■■□□□ 1.76
CKLF-204ENST00000362093 KIF15Q9NS87 1388 aa25.99■■□□□ 1.75
CKLF-204ENST00000362093 DUOX2Q9NRD8 1548 aa25.98■■□□□ 1.75
CKLF-204ENST00000362093 ANKRD30AQ9BXX3 1397 aa25.98■■□□□ 1.75
CKLF-204ENST00000362093 C3P01024 1663 aa25.98■■□□□ 1.75
CKLF-204ENST00000362093 NCOA1Q15788 1441 aa25.97■■□□□ 1.75
CKLF-204ENST00000362093 LMTK3Q96Q04 1460 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms