RNA–Protein interactions for RNA: ENST00000360244.8

APH1A-202, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APH1A, Length 2,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-202ENST00000360244 KIF7Q2M1P5 1343 aa24.2■■□□□ 1.46
APH1A-202ENST00000360244 MPHOSPH9Q99550 1183 aa24.2■■□□□ 1.46
APH1A-202ENST00000360244 TCOF1Q13428 1488 aaKnown RBP24.2■■□□□ 1.46
APH1A-202ENST00000360244 RTL5Q5HYW3 569 aaPredicted RBP24.19■■□□□ 1.46
APH1A-202ENST00000360244 NUDCQ9Y266 331 aa24.19■■□□□ 1.46
APH1A-202ENST00000360244 ZBTB47Q9UFB7 747 aaPredicted RBP24.18■■□□□ 1.46
APH1A-202ENST00000360244 SPATA31E1Q6ZUB1 1445 aa24.18■■□□□ 1.46
APH1A-202ENST00000360244 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
APH1A-202ENST00000360244 POLA1P09884 1462 aaPredicted RBP24.15■■□□□ 1.46
APH1A-202ENST00000360244 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
APH1A-202ENST00000360244 NBPF8Q3BBV2 869 aa24.15■■□□□ 1.46
APH1A-202ENST00000360244 MAGI3Q5TCQ9 1506 aa24.14■■□□□ 1.45
APH1A-202ENST00000360244 RPRD2Q5VT52 1461 aaKnown RBP24.13■■□□□ 1.45
APH1A-202ENST00000360244 FOXD1Q16676 465 aa24.13■■□□□ 1.45
APH1A-202ENST00000360244 TEX14Q8IWB6 1497 aa24.12■■□□□ 1.45
APH1A-202ENST00000360244 ANKRD30BQ9BXX2 1392 aa24.09■■□□□ 1.45
APH1A-202ENST00000360244 TOPBP1Q92547 1522 aa24.08■■□□□ 1.45
APH1A-202ENST00000360244 DHX29Q7Z478 1369 aaKnown RBP24.08■■□□□ 1.45
APH1A-202ENST00000360244 ANO8Q9HCE9 1232 aaPredicted RBP24.05■■□□□ 1.44
APH1A-202ENST00000360244 KIF21AQ7Z4S6 1674 aa24.04■■□□□ 1.44
APH1A-202ENST00000360244 MIA2Q96PC5 1412 aa24.02■■□□□ 1.44
APH1A-202ENST00000360244 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
APH1A-202ENST00000360244 IL27Q8NEV9 243 aa23.96■■□□□ 1.43
APH1A-202ENST00000360244 PNISRQ8TF01 805 aaKnown RBP23.95■■□□□ 1.43
APH1A-202ENST00000360244 BCORL1Q5H9F3 1711 aa23.94■■□□□ 1.42
APH1A-202ENST00000360244 SALL2Q9Y467 1007 aaPredicted RBP23.94■■□□□ 1.42
APH1A-202ENST00000360244 ROCK1Q13464 1354 aa23.93■■□□□ 1.42
APH1A-202ENST00000360244 SENP3-EIF4A1A0A087X0R7 540 aa23.92■■□□□ 1.42
APH1A-202ENST00000360244 TCERG1O14776 1098 aaKnown RBP23.91■■□□□ 1.42
APH1A-202ENST00000360244 NPM2Q86SE8 214 aaKnown RBP23.91■■□□□ 1.42
APH1A-202ENST00000360244 USP35Q9P2H5 1018 aa23.91■■□□□ 1.42
APH1A-202ENST00000360244 EPRSP07814 1512 aaKnown RBP23.9■■□□□ 1.42
APH1A-202ENST00000360244 SLC4A1APQ9BWU0 796 aaKnown RBP23.9■■□□□ 1.42
APH1A-202ENST00000360244 USP47Q96K76 1375 aa23.89■■□□□ 1.42
APH1A-202ENST00000360244 DAPK1P53355 1430 aa23.89■■□□□ 1.42
APH1A-202ENST00000360244 NESP48681 1621 aa23.89■■□□□ 1.42
APH1A-202ENST00000360244 POLR3GLQ9BT43 218 aa23.89■■□□□ 1.41
APH1A-202ENST00000360244 MBD5Q9P267 1494 aa23.88■■□□□ 1.41
APH1A-202ENST00000360244 NEFMP07197 916 aa23.88■■□□□ 1.41
APH1A-202ENST00000360244 TMC1Q8TDI8 760 aa23.88■■□□□ 1.41
APH1A-202ENST00000360244 ARID4BQ4LE39 1312 aaPredicted RBP23.88■■□□□ 1.41
APH1A-202ENST00000360244 RRP1P56182 461 aaKnown RBP23.87■■□□□ 1.41
APH1A-202ENST00000360244 PDE4AP27815 886 aa23.86■■□□□ 1.41
APH1A-202ENST00000360244 LAS1LQ9Y4W2 734 aaKnown RBP23.86■■□□□ 1.41
APH1A-202ENST00000360244 TDRD9Q8NDG6 1382 aaKnown RBP23.85■■□□□ 1.41
APH1A-202ENST00000360244 LRPPRCP42704 1394 aaKnown RBP23.85■■□□□ 1.41
APH1A-202ENST00000360244 CDK13Q14004 1512 aaKnown RBP23.85■■□□□ 1.41
APH1A-202ENST00000360244 EXOC6Q8TAG9 804 aa23.85■■□□□ 1.41
APH1A-202ENST00000360244 GAPVD1Q14C86 1478 aa23.84■■□□□ 1.41
APH1A-202ENST00000360244 DNMT1P26358 1616 aaKnown RBP23.84■■□□□ 1.41
APH1A-202ENST00000360244 KDM5CP41229 1560 aa23.83■■□□□ 1.41
APH1A-202ENST00000360244 LAMC3Q9Y6N6 1575 aa23.83■■□□□ 1.41
APH1A-202ENST00000360244 BACH2Q9BYV9 841 aa23.83■■□□□ 1.41
APH1A-202ENST00000360244 ABCC5O15440 1437 aa23.82■■□□□ 1.4
APH1A-202ENST00000360244 RTN4Q9NQC3 1192 aaKnown RBP23.82■■□□□ 1.4
APH1A-202ENST00000360244 KIF14Q15058 1648 aa23.82■■□□□ 1.4
APH1A-202ENST00000360244 ROCK2O75116 1388 aaKnown RBP23.81■■□□□ 1.4
APH1A-202ENST00000360244 MS4A1P11836 297 aa23.81■■□□□ 1.4
APH1A-202ENST00000360244 WASHC2CQ9Y4E1 1318 aa23.8■■□□□ 1.4
APH1A-202ENST00000360244 PPM1GO15355 546 aaPredicted RBP23.79■■□□□ 1.4
APH1A-202ENST00000360244 PZPP20742 1482 aa23.79■■□□□ 1.4
APH1A-202ENST00000360244 RCAN3Q9UKA8 241 aa23.78■■□□□ 1.4
APH1A-202ENST00000360244 KIF15Q9NS87 1388 aa23.77■■□□□ 1.4
APH1A-202ENST00000360244 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
APH1A-202ENST00000360244 BRD4O60885 1362 aaPredicted RBP23.77■■□□□ 1.4
APH1A-202ENST00000360244 ZNF326Q5BKZ1 582 aaKnown RBP23.76■■□□□ 1.39
APH1A-202ENST00000360244 WDR62O43379 1518 aa23.76■■□□□ 1.39
APH1A-202ENST00000360244 MYBBP1AQ9BQG0 1328 aaKnown RBP23.74■■□□□ 1.39
APH1A-202ENST00000360244 KTN1Q86UP2 1357 aaKnown RBP23.73■■□□□ 1.39
APH1A-202ENST00000360244 ZNF644Q9H582 1327 aaPredicted RBP23.71■■□□□ 1.39
APH1A-202ENST00000360244 KIAA1107Q9UPP5 1409 aa23.71■■□□□ 1.39
APH1A-202ENST00000360244 ARID3CA6NKF2 412 aa23.71■■□□□ 1.39
APH1A-202ENST00000360244 RALBP1Q15311 655 aa23.7■■□□□ 1.38
APH1A-202ENST00000360244 IQGAP2Q13576 1575 aa23.68■■□□□ 1.38
APH1A-202ENST00000360244 RALGAPBQ86X10 1494 aa23.68■■□□□ 1.38
APH1A-202ENST00000360244 PDE3BQ13370 1112 aa23.67■■□□□ 1.38
APH1A-202ENST00000360244 UHRF1BP1Q6BDS2 1440 aa23.67■■□□□ 1.38
APH1A-202ENST00000360244 DDRGK1Q96HY6 314 aa23.66■■□□□ 1.38
APH1A-202ENST00000360244 E9PCH4 1651 aa23.64■■□□□ 1.37
APH1A-202ENST00000360244 CARD11Q9BXL7 1154 aa23.63■■□□□ 1.37
APH1A-202ENST00000360244 GSE1Q14687 1217 aa23.62■■□□□ 1.37
APH1A-202ENST00000360244 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.62■■□□□ 1.37
APH1A-202ENST00000360244 PKD2Q13563 968 aa23.61■■□□□ 1.37
APH1A-202ENST00000360244 ADGBQ8N7X0 1667 aa23.6■■□□□ 1.37
APH1A-202ENST00000360244 BRPF3Q9ULD4 1205 aa23.59■■□□□ 1.37
APH1A-202ENST00000360244 ST20-MTHFSA0A0A6YYL1 179 aa23.58■■□□□ 1.37
APH1A-202ENST00000360244 NLRP13Q86W25 1043 aa23.58■■□□□ 1.37
APH1A-202ENST00000360244 CDCA7LQ96GN5 454 aa23.57■■□□□ 1.36
APH1A-202ENST00000360244 ARHGEF12Q9NZN5 1544 aa23.56■■□□□ 1.36
APH1A-202ENST00000360244 NFKBIBQ15653 356 aa23.56■■□□□ 1.36
APH1A-202ENST00000360244 CAMSAP2Q08AD1 1489 aa23.56■■□□□ 1.36
APH1A-202ENST00000360244 SKAP1Q86WV1 359 aa23.55■■□□□ 1.36
APH1A-202ENST00000360244 PARD3Q8TEW0 1356 aa23.55■■□□□ 1.36
APH1A-202ENST00000360244 PLIN1O60240 522 aa23.55■■□□□ 1.36
APH1A-202ENST00000360244 ADGRL2O95490 1459 aa23.54■■□□□ 1.36
APH1A-202ENST00000360244 CRBNQ96SW2 442 aa23.53■■□□□ 1.36
APH1A-202ENST00000360244 TARBP1Q13395 1621 aaKnown RBP23.52■■□□□ 1.36
APH1A-202ENST00000360244 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
APH1A-202ENST00000360244 NUP153P49790 1475 aaKnown RBP23.51■■□□□ 1.35
APH1A-202ENST00000360244 CROCC2H7BZ55 1655 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms