RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 ARAP3Q8WWN8 1544 aa29.84■■■□□ 2.37
HLA-DRB1-201ENST00000360004 NCOA2Q15596 1464 aa29.83■■■□□ 2.37
HLA-DRB1-201ENST00000360004 ZNF777Q9ULD5 760 aaPredicted RBP29.83■■■□□ 2.37
HLA-DRB1-201ENST00000360004 PREX2Q70Z35 1606 aa29.82■■■□□ 2.36
HLA-DRB1-201ENST00000360004 CFDP1Q9UEE9 299 aaPredicted RBP29.81■■■□□ 2.36
HLA-DRB1-201ENST00000360004 GPATCH8Q9UKJ3 1502 aaKnown RBP29.78■■■□□ 2.36
HLA-DRB1-201ENST00000360004 CDC42BPAQ5VT25 1732 aa29.78■■■□□ 2.36
HLA-DRB1-201ENST00000360004 ADGRL1O94910 1474 aa29.78■■■□□ 2.36
HLA-DRB1-201ENST00000360004 CDC42BPBQ9Y5S2 1711 aa29.76■■■□□ 2.35
HLA-DRB1-201ENST00000360004 ITSN2Q9NZM3 1697 aa29.76■■■□□ 2.35
HLA-DRB1-201ENST00000360004 COL17A1Q9UMD9 1497 aaPredicted RBP29.75■■■□□ 2.35
HLA-DRB1-201ENST00000360004 DENND4BO75064 1496 aaPredicted RBP29.74■■■□□ 2.35
HLA-DRB1-201ENST00000360004 SCAPERQ9BY12 1400 aa29.73■■■□□ 2.35
HLA-DRB1-201ENST00000360004 RAPGEF3O95398 923 aa29.72■■■□□ 2.35
HLA-DRB1-201ENST00000360004 PPARGC1BQ86YN6 1023 aaKnown RBP29.66■■■□□ 2.34
HLA-DRB1-201ENST00000360004 MYT1LQ9UL68 1186 aa29.66■■■□□ 2.34
HLA-DRB1-201ENST00000360004 PLEKHH2Q8IVE3 1493 aa29.64■■■□□ 2.34
HLA-DRB1-201ENST00000360004 MYOM3Q5VTT5 1437 aa29.62■■■□□ 2.33
HLA-DRB1-201ENST00000360004 ABCC1P33527 1531 aa29.62■■■□□ 2.33
HLA-DRB1-201ENST00000360004 POGZQ7Z3K3 1410 aa29.62■■■□□ 2.33
HLA-DRB1-201ENST00000360004 SAMD9LQ8IVG5 1584 aa29.61■■■□□ 2.33
HLA-DRB1-201ENST00000360004 ZNF518AQ6AHZ1 1483 aa29.59■■■□□ 2.33
HLA-DRB1-201ENST00000360004 HNRNPMP52272 730 aaKnown RBP eCLIP29.58■■■□□ 2.33
HLA-DRB1-201ENST00000360004 ZNF644Q9H582 1327 aaPredicted RBP29.58■■■□□ 2.33
HLA-DRB1-201ENST00000360004 SYCP2Q9BX26 1530 aa29.57■■■□□ 2.32
HLA-DRB1-201ENST00000360004 RICTORQ6R327 1708 aa29.57■■■□□ 2.32
HLA-DRB1-201ENST00000360004 FRMPD1Q5SYB0 1578 aa29.56■■■□□ 2.32
HLA-DRB1-201ENST00000360004 AFAP1Q8N556 730 aa29.55■■■□□ 2.32
HLA-DRB1-201ENST00000360004 CAMSAP2Q08AD1 1489 aa29.55■■■□□ 2.32
HLA-DRB1-201ENST00000360004 MIA2Q96PC5 1412 aa29.54■■■□□ 2.32
HLA-DRB1-201ENST00000360004 KIAA1107Q9UPP5 1409 aa29.54■■■□□ 2.32
HLA-DRB1-201ENST00000360004 ARHGEF12Q9NZN5 1544 aa29.52■■■□□ 2.32
HLA-DRB1-201ENST00000360004 TRAPPC8Q9Y2L5 1435 aa29.52■■■□□ 2.32
HLA-DRB1-201ENST00000360004 ZMYM4Q5VZL5 1548 aa29.49■■■□□ 2.31
HLA-DRB1-201ENST00000360004 FGD6Q6ZV73 1430 aa29.47■■■□□ 2.31
HLA-DRB1-201ENST00000360004 ZFYVE16Q7Z3T8 1539 aa29.47■■■□□ 2.31
HLA-DRB1-201ENST00000360004 MAGI2Q86UL8 1455 aa29.47■■■□□ 2.31
HLA-DRB1-201ENST00000360004 SPAG9O60271 1321 aaKnown RBP29.46■■■□□ 2.31
HLA-DRB1-201ENST00000360004 KDM5CP41229 1560 aa29.44■■■□□ 2.3
HLA-DRB1-201ENST00000360004 RSPH4AQ5TD94 716 aa29.44■■■□□ 2.3
HLA-DRB1-201ENST00000360004 PTPN23Q9H3S7 1636 aa29.44■■■□□ 2.3
HLA-DRB1-201ENST00000360004 HECW2Q9P2P5 1572 aa29.43■■■□□ 2.3
HLA-DRB1-201ENST00000360004 FAM50AQ14320 339 aaKnown RBP29.43■■■□□ 2.3
HLA-DRB1-201ENST00000360004 CCDC141Q6ZP82 1450 aa29.42■■■□□ 2.3
HLA-DRB1-201ENST00000360004 ARHGEF40Q8TER5 1519 aa29.41■■■□□ 2.3
HLA-DRB1-201ENST00000360004 YEATS2Q9ULM3 1422 aa29.4■■■□□ 2.3
HLA-DRB1-201ENST00000360004 TSPY4P0CV99 314 aa29.4■■■□□ 2.3
HLA-DRB1-201ENST00000360004 TSPY10P0CW01 314 aa29.4■■■□□ 2.3
HLA-DRB1-201ENST00000360004 MBD5Q9P267 1494 aa29.4■■■□□ 2.3
HLA-DRB1-201ENST00000360004 ARID4BQ4LE39 1312 aaPredicted RBP29.4■■■□□ 2.3
HLA-DRB1-201ENST00000360004 MLH3Q9UHC1 1453 aa29.38■■■□□ 2.29
HLA-DRB1-201ENST00000360004 ARHGEF5Q12774 1597 aa29.35■■■□□ 2.29
HLA-DRB1-201ENST00000360004 TCOF1Q13428 1488 aaKnown RBP29.34■■■□□ 2.29
HLA-DRB1-201ENST00000360004 ATP7AQ04656 1500 aa29.33■■■□□ 2.29
HLA-DRB1-201ENST00000360004 ATP10AO60312 1499 aa29.32■■■□□ 2.28
HLA-DRB1-201ENST00000360004 C9orf84Q5VXU9 1444 aa29.31■■■□□ 2.28
HLA-DRB1-201ENST00000360004 INO80Q9ULG1 1556 aaPredicted RBP29.28■■■□□ 2.28
HLA-DRB1-201ENST00000360004 DIP2CQ9Y2E4 1556 aa29.28■■■□□ 2.28
HLA-DRB1-201ENST00000360004 KIDINS220Q9ULH0 1771 aa29.28■■■□□ 2.28
HLA-DRB1-201ENST00000360004 ABCA6Q8N139 1617 aa29.27■■■□□ 2.28
HLA-DRB1-201ENST00000360004 RTEL1-TNFRSF6BF6WH68 1400 aa29.26■■■□□ 2.27
HLA-DRB1-201ENST00000360004 DAPK1P53355 1430 aa29.24■■■□□ 2.27
HLA-DRB1-201ENST00000360004 ABCC5O15440 1437 aa29.22■■■□□ 2.27
HLA-DRB1-201ENST00000360004 DNMT1P26358 1616 aaKnown RBP29.22■■■□□ 2.27
HLA-DRB1-201ENST00000360004 ITGAEP38570 1179 aa29.21■■■□□ 2.27
HLA-DRB1-201ENST00000360004 MLECQ14165 292 aa29.21■■■□□ 2.27
HLA-DRB1-201ENST00000360004 CHIC2Q9UKJ5 165 aa29.2■■■□□ 2.26
HLA-DRB1-201ENST00000360004 SHANK2Q9UPX8 1470 aa29.18■■■□□ 2.26
HLA-DRB1-201ENST00000360004 MAST1Q9Y2H9 1570 aa29.18■■■□□ 2.26
HLA-DRB1-201ENST00000360004 A2MP01023 1474 aa29.17■■■□□ 2.26
HLA-DRB1-201ENST00000360004 CROCC2H7BZ55 1655 aa29.17■■■□□ 2.26
HLA-DRB1-201ENST00000360004 ADGBQ8N7X0 1667 aa29.15■■■□□ 2.26
HLA-DRB1-201ENST00000360004 REREQ9P2R6 1566 aa29.15■■■□□ 2.26
HLA-DRB1-201ENST00000360004 RRBP1Q9P2E9 1410 aaKnown RBP29.14■■■□□ 2.26
HLA-DRB1-201ENST00000360004 ANKRD30AQ9BXX3 1397 aa29.13■■■□□ 2.25
HLA-DRB1-201ENST00000360004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.13■■■□□ 2.25
HLA-DRB1-201ENST00000360004 RRP7BPQ9NSQ0 103 aa29.11■■■□□ 2.25
HLA-DRB1-201ENST00000360004 DHX29Q7Z478 1369 aaKnown RBP29.1■■■□□ 2.25
HLA-DRB1-201ENST00000360004 ESF1Q9H501 851 aaKnown RBP29.09■■■□□ 2.25
HLA-DRB1-201ENST00000360004 KDM4FA0A1W2PPD8 638 aa29.08■■■□□ 2.25
HLA-DRB1-201ENST00000360004 AEBP2Q6ZN18 517 aaPredicted RBP29.08■■■□□ 2.25
HLA-DRB1-201ENST00000360004 KIF15Q9NS87 1388 aa29.08■■■□□ 2.25
HLA-DRB1-201ENST00000360004 AGLP35573 1532 aa29.08■■■□□ 2.25
HLA-DRB1-201ENST00000360004 PLXNC1O60486 1568 aa29.08■■■□□ 2.25
HLA-DRB1-201ENST00000360004 BCORL1Q5H9F3 1711 aa29.08■■■□□ 2.25
HLA-DRB1-201ENST00000360004 SIGLEC1Q9BZZ2 1709 aa29.08■■■□□ 2.25
HLA-DRB1-201ENST00000360004 KIF3BO15066 747 aa29.04■■■□□ 2.24
HLA-DRB1-201ENST00000360004 GGT6Q6P531 493 aa29.03■■■□□ 2.24
HLA-DRB1-201ENST00000360004 DUOX2Q9NRD8 1548 aa29.02■■■□□ 2.24
HLA-DRB1-201ENST00000360004 ADGRL2O95490 1459 aa28.99■■■□□ 2.23
HLA-DRB1-201ENST00000360004 NCOA1Q15788 1441 aa28.99■■■□□ 2.23
HLA-DRB1-201ENST00000360004 MADDQ8WXG6 1647 aa28.98■■■□□ 2.23
HLA-DRB1-201ENST00000360004 PTPRKQ15262 1439 aa28.98■■■□□ 2.23
HLA-DRB1-201ENST00000360004 ADAMTSL3P82987 1691 aa28.98■■■□□ 2.23
HLA-DRB1-201ENST00000360004 PLPPR3Q6T4P5 718 aa28.97■■■□□ 2.23
HLA-DRB1-201ENST00000360004 ERBINQ96RT1 1412 aa28.94■■■□□ 2.22
HLA-DRB1-201ENST00000360004 FER1L4A9Z1Z3 1794 aa28.94■■■□□ 2.22
HLA-DRB1-201ENST00000360004 ROCK1Q13464 1354 aa28.94■■■□□ 2.22
HLA-DRB1-201ENST00000360004 RIMS1Q86UR5 1692 aaKnown RBP28.93■■■□□ 2.22
HLA-DRB1-201ENST00000360004 EIF2AK4Q9P2K8 1649 aaKnown RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms