RNA–Protein interactions for RNA: ENST00000359865.7

MTCL1-202, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene MTCL1, Length 6,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-202ENST00000359865 IRX6P78412 446 aaPredicted RBP18.36■□□□□ 0.53
MTCL1-202ENST00000359865 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
MTCL1-202ENST00000359865 ANP32BQ92688 251 aaKnown RBP18.35■□□□□ 0.53
MTCL1-202ENST00000359865 ROCK2O75116 1388 aaKnown RBP18.35■□□□□ 0.53
MTCL1-202ENST00000359865 RAD54L2Q9Y4B4 1467 aa18.35■□□□□ 0.53
MTCL1-202ENST00000359865 RAB3GAP2Q9H2M9 1393 aa18.34■□□□□ 0.53
MTCL1-202ENST00000359865 EIF3AQ14152 1382 aaKnown RBP18.33■□□□□ 0.53
MTCL1-202ENST00000359865 SOX12O15370 315 aa18.33■□□□□ 0.52
MTCL1-202ENST00000359865 NPHP1O15259 732 aa18.32■□□□□ 0.52
MTCL1-202ENST00000359865 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
MTCL1-202ENST00000359865 HSPA5P11021 654 aaKnown RBP18.29■□□□□ 0.52
MTCL1-202ENST00000359865 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
MTCL1-202ENST00000359865 PAK3O75914 559 aaPredicted RBP18.27■□□□□ 0.52
MTCL1-202ENST00000359865 CHMP4BQ9H444 224 aaKnown RBP18.27■□□□□ 0.52
MTCL1-202ENST00000359865 CC2D2AQ9P2K1 1620 aa18.26■□□□□ 0.51
MTCL1-202ENST00000359865 AQRO60306 1485 aaKnown RBP eCLIP18.25■□□□□ 0.513e-6■■■□□ 19
MTCL1-202ENST00000359865 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
MTCL1-202ENST00000359865 IGF1RP08069 1367 aa18.25■□□□□ 0.51
MTCL1-202ENST00000359865 MS4A1P11836 297 aa18.24■□□□□ 0.51
MTCL1-202ENST00000359865 MRC2Q9UBG0 1479 aa18.24■□□□□ 0.51
MTCL1-202ENST00000359865 KTN1Q86UP2 1357 aaKnown RBP18.24■□□□□ 0.51
MTCL1-202ENST00000359865 EIF5BO60841 1220 aaKnown RBP18.22■□□□□ 0.51
MTCL1-202ENST00000359865 RTF1Q92541 710 aaKnown RBP18.22■□□□□ 0.51
MTCL1-202ENST00000359865 GRIN2BQ13224 1484 aa18.21■□□□□ 0.51
MTCL1-202ENST00000359865 FRAT1Q92837 279 aaPredicted RBP18.2■□□□□ 0.5
MTCL1-202ENST00000359865 CSB-PGBD3P0DP91 1061 aa18.19■□□□□ 0.5
MTCL1-202ENST00000359865 NUTM2DQ5VT03 806 aaPredicted RBP18.18■□□□□ 0.5
MTCL1-202ENST00000359865 UACAQ9BZF9 1416 aa18.18■□□□□ 0.5
MTCL1-202ENST00000359865 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
MTCL1-202ENST00000359865 OS9Q13438 667 aaPredicted RBP18.17■□□□□ 0.5
MTCL1-202ENST00000359865 TERF2IPQ9NYB0 399 aa18.16■□□□□ 0.5
MTCL1-202ENST00000359865 FAM69CQ0P6D2 419 aa18.16■□□□□ 0.5
MTCL1-202ENST00000359865 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
MTCL1-202ENST00000359865 BECN1Q14457 450 aa18.16■□□□□ 0.5
MTCL1-202ENST00000359865 CFTRP13569 1480 aa18.15■□□□□ 0.5
MTCL1-202ENST00000359865 IFT140Q96RY7 1462 aa18.15■□□□□ 0.5
MTCL1-202ENST00000359865 CCDC144AA2RUR9 1427 aa18.15■□□□□ 0.5
MTCL1-202ENST00000359865 SUPT16HQ9Y5B9 1047 aaKnown RBP18.13■□□□□ 0.49
MTCL1-202ENST00000359865 DDRGK1Q96HY6 314 aa18.13■□□□□ 0.49
MTCL1-202ENST00000359865 NGDNQ8NEJ9 315 aaKnown RBP18.12■□□□□ 0.49
MTCL1-202ENST00000359865 NESP48681 1621 aa18.12■□□□□ 0.49
MTCL1-202ENST00000359865 CUX1P39880 1505 aa18.11■□□□□ 0.49
MTCL1-202ENST00000359865 RALBP1Q15311 655 aa18.11■□□□□ 0.49
MTCL1-202ENST00000359865 CALD1Q05682 793 aaKnown RBP18.11■□□□□ 0.49
MTCL1-202ENST00000359865 L3MBTL2Q969R5 705 aa18.1■□□□□ 0.49
MTCL1-202ENST00000359865 CCER2I3L3R5 266 aa18.1■□□□□ 0.49
MTCL1-202ENST00000359865 GOLGA2Q08379 1002 aa18.09■□□□□ 0.49
MTCL1-202ENST00000359865 CCDC9Q9Y3X0 531 aaKnown RBP18.08■□□□□ 0.48
MTCL1-202ENST00000359865 MYOM3Q5VTT5 1437 aa18.08■□□□□ 0.48
MTCL1-202ENST00000359865 VGFO15240 615 aaPredicted RBP18.07■□□□□ 0.48
MTCL1-202ENST00000359865 U2AF1L5P0DN76 240 aaPredicted RBP18.07■□□□□ 0.48
MTCL1-202ENST00000359865 U2AF1Q01081 240 aaKnown RBP eCLIP18.07■□□□□ 0.48
MTCL1-202ENST00000359865 NCLP19338 710 aaKnown RBP18.07■□□□□ 0.48
MTCL1-202ENST00000359865 TRAK1Q9UPV9 953 aa18.05■□□□□ 0.48
MTCL1-202ENST00000359865 PRG4Q92954 1404 aaPredicted RBP18.04■□□□□ 0.48
MTCL1-202ENST00000359865 GLIPR1L2Q4G1C9 344 aa18.02■□□□□ 0.48
MTCL1-202ENST00000359865 TOPBP1Q92547 1522 aa18.02■□□□□ 0.48
MTCL1-202ENST00000359865 SYNJ2O15056 1496 aa18.02■□□□□ 0.48
MTCL1-202ENST00000359865 PPP4R2Q9NY27 417 aa18.01■□□□□ 0.47
MTCL1-202ENST00000359865 CHMP4AQ9BY43 222 aa18.01■□□□□ 0.47
MTCL1-202ENST00000359865 AMPHP49418 695 aa18■□□□□ 0.47
MTCL1-202ENST00000359865 GOLGA6L22H0YM25 854 aa17.99■□□□□ 0.47
MTCL1-202ENST00000359865 IPO8O15397 1037 aaKnown RBP17.99■□□□□ 0.47
MTCL1-202ENST00000359865 ARHGAP5Q13017 1502 aa17.99■□□□□ 0.47
MTCL1-202ENST00000359865 CASKIN1Q8WXD9 1431 aa17.99■□□□□ 0.47
MTCL1-202ENST00000359865 NUTM2FA1L443 756 aa17.98■□□□□ 0.47
MTCL1-202ENST00000359865 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.98■□□□□ 0.47
MTCL1-202ENST00000359865 CDK11BP21127 795 aaKnown RBP17.98■□□□□ 0.47
MTCL1-202ENST00000359865 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.98■□□□□ 0.47
MTCL1-202ENST00000359865 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
MTCL1-202ENST00000359865 RGS3P49796 1198 aa17.98■□□□□ 0.47
MTCL1-202ENST00000359865 SYNJ1O43426 1573 aa17.97■□□□□ 0.47
MTCL1-202ENST00000359865 SNAPC4Q5SXM2 1469 aa17.97■□□□□ 0.47
MTCL1-202ENST00000359865 KIF21BO75037 1637 aa17.96■□□□□ 0.47
MTCL1-202ENST00000359865 FYCO1Q9BQS8 1478 aa17.96■□□□□ 0.47
MTCL1-202ENST00000359865 FGD6Q6ZV73 1430 aa17.96■□□□□ 0.47
MTCL1-202ENST00000359865 EVC2Q86UK5 1308 aa17.96■□□□□ 0.47
MTCL1-202ENST00000359865 NBR1Q14596 966 aa17.96■□□□□ 0.47
MTCL1-202ENST00000359865 KIF15Q9NS87 1388 aa17.96■□□□□ 0.47
MTCL1-202ENST00000359865 DNMBPQ6XZF7 1577 aa17.96■□□□□ 0.47
MTCL1-202ENST00000359865 KCNJ4P48050 445 aa17.95■□□□□ 0.46
MTCL1-202ENST00000359865 ZNF330Q9Y3S2 320 aaPredicted RBP17.95■□□□□ 0.46
MTCL1-202ENST00000359865 AEBP2Q6ZN18 517 aaPredicted RBP17.95■□□□□ 0.46
MTCL1-202ENST00000359865 POLA1P09884 1462 aaPredicted RBP17.93■□□□□ 0.46
MTCL1-202ENST00000359865 TOP2BQ02880 1626 aa17.93■□□□□ 0.46
MTCL1-202ENST00000359865 FGD1P98174 961 aa17.93■□□□□ 0.46
MTCL1-202ENST00000359865 LMOD3Q0VAK6 560 aa17.93■□□□□ 0.46
MTCL1-202ENST00000359865 STK31Q9BXU1 1019 aa17.92■□□□□ 0.46
MTCL1-202ENST00000359865 LRRC9Q6ZRR7 1453 aa17.92■□□□□ 0.46
MTCL1-202ENST00000359865 EFCAB5A4FU69 1503 aa17.91■□□□□ 0.46
MTCL1-202ENST00000359865 ZRSR1Q15695 479 aaKnown RBP17.91■□□□□ 0.46
MTCL1-202ENST00000359865 LTV1Q96GA3 475 aaPredicted RBP17.91■□□□□ 0.46
MTCL1-202ENST00000359865 NCOA2Q15596 1464 aa17.9■□□□□ 0.46
MTCL1-202ENST00000359865 COG3Q96JB2 828 aa17.9■□□□□ 0.46
MTCL1-202ENST00000359865 DHX57Q6P158 1386 aaKnown RBP17.89■□□□□ 0.45
MTCL1-202ENST00000359865 PHLDB1Q86UU1 1377 aa17.89■□□□□ 0.45
MTCL1-202ENST00000359865 ZNF644Q9H582 1327 aaPredicted RBP17.89■□□□□ 0.45
MTCL1-202ENST00000359865 LAMC3Q9Y6N6 1575 aa17.89■□□□□ 0.45
MTCL1-202ENST00000359865 TMX4Q9H1E5 349 aaPredicted RBP17.89■□□□□ 0.45
MTCL1-202ENST00000359865 ST20-MTHFSA0A0A6YYL1 179 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms