RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 MS4A1P11836 297 aa15.82■□□□□ 0.12
DNMT1-202ENST00000359526 KIF21BO75037 1637 aa15.81■□□□□ 0.12
DNMT1-202ENST00000359526 PLPPR3Q6T4P5 718 aa15.81■□□□□ 0.12
DNMT1-202ENST00000359526 POGKQ9P215 609 aa15.81■□□□□ 0.12
DNMT1-202ENST00000359526 RBM19Q9Y4C8 960 aaKnown RBP15.81■□□□□ 0.12
DNMT1-202ENST00000359526 RGL3Q3MIN7 710 aa15.81■□□□□ 0.12
DNMT1-202ENST00000359526 NUDCQ9Y266 331 aa15.81■□□□□ 0.12
DNMT1-202ENST00000359526 FTSJ3Q8IY81 847 aaKnown RBP15.8■□□□□ 0.12
DNMT1-202ENST00000359526 SPAG9O60271 1321 aaKnown RBP15.79■□□□□ 0.12
DNMT1-202ENST00000359526 STAC3Q96MF2 364 aa15.79■□□□□ 0.12
DNMT1-202ENST00000359526 TOP2BQ02880 1626 aa15.78■□□□□ 0.12
DNMT1-202ENST00000359526 TMF1P82094 1093 aa15.77■□□□□ 0.12
DNMT1-202ENST00000359526 BICRAQ9NZM4 1560 aa15.77■□□□□ 0.12
DNMT1-202ENST00000359526 IGF1RP08069 1367 aa15.77■□□□□ 0.11
DNMT1-202ENST00000359526 PLEKHH2Q8IVE3 1493 aa15.76■□□□□ 0.11
DNMT1-202ENST00000359526 HAP1P54257 671 aaPredicted RBP15.76■□□□□ 0.11
DNMT1-202ENST00000359526 CHMP4AQ9BY43 222 aa15.75■□□□□ 0.11
DNMT1-202ENST00000359526 FHOD3Q2V2M9 1422 aa15.75■□□□□ 0.11
DNMT1-202ENST00000359526 MAPK8IP3Q9UPT6 1336 aa15.74■□□□□ 0.11
DNMT1-202ENST00000359526 TOPBP1Q92547 1522 aa15.74■□□□□ 0.11
DNMT1-202ENST00000359526 EID1Q9Y6B2 187 aa15.73■□□□□ 0.11
DNMT1-202ENST00000359526 SYNJ2O15056 1496 aa15.72■□□□□ 0.11
DNMT1-202ENST00000359526 TSHZ2Q9NRE2 1034 aa15.71■□□□□ 0.11
DNMT1-202ENST00000359526 PTMAP06454 111 aaKnown RBP15.71■□□□□ 0.1
DNMT1-202ENST00000359526 CUL7Q14999 1698 aa15.7■□□□□ 0.1
DNMT1-202ENST00000359526 MYOM3Q5VTT5 1437 aa15.7■□□□□ 0.1
DNMT1-202ENST00000359526 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.69■□□□□ 0.1
DNMT1-202ENST00000359526 DNTTIP2Q5QJE6 756 aaKnown RBP15.69■□□□□ 0.1
DNMT1-202ENST00000359526 B4GALNT3Q6L9W6 998 aa15.69■□□□□ 0.1
DNMT1-202ENST00000359526 CASKIN1Q8WXD9 1431 aa15.68■□□□□ 0.1
DNMT1-202ENST00000359526 FYCO1Q9BQS8 1478 aa15.68■□□□□ 0.1
DNMT1-202ENST00000359526 RGS3P49796 1198 aa15.68■□□□□ 0.1
DNMT1-202ENST00000359526 ZRSR1Q15695 479 aaKnown RBP15.66■□□□□ 0.1
DNMT1-202ENST00000359526 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
DNMT1-202ENST00000359526 CFAP44Q96MT7 982 aa15.66■□□□□ 0.1
DNMT1-202ENST00000359526 NUP155O75694 1391 aa15.66■□□□□ 0.1
DNMT1-202ENST00000359526 SENP3-EIF4A1A0A087X0R7 540 aa15.65■□□□□ 0.1
DNMT1-202ENST00000359526 HDGFL2Q7Z4V5 671 aaPredicted RBP15.65■□□□□ 0.1
DNMT1-202ENST00000359526 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
DNMT1-202ENST00000359526 CDK11BP21127 795 aaKnown RBP15.65■□□□□ 0.1
DNMT1-202ENST00000359526 L1TD1Q5T7N2 865 aaKnown RBP15.65■□□□□ 0.1
DNMT1-202ENST00000359526 ABCA10Q8WWZ4 1543 aa15.64■□□□□ 0.09
DNMT1-202ENST00000359526 HSPA5P11021 654 aaKnown RBP15.64■□□□□ 0.09
DNMT1-202ENST00000359526 CC2D1BQ5T0F9 858 aaKnown RBP15.64■□□□□ 0.09
DNMT1-202ENST00000359526 FRAT1Q92837 279 aaPredicted RBP15.63■□□□□ 0.09
DNMT1-202ENST00000359526 ROCK2O75116 1388 aaKnown RBP15.63■□□□□ 0.09
DNMT1-202ENST00000359526 HECW1Q76N89 1606 aa15.63■□□□□ 0.09
DNMT1-202ENST00000359526 HSP90AB1P08238 724 aaKnown RBP15.63■□□□□ 0.09
DNMT1-202ENST00000359526 NEUROD2Q15784 382 aa15.62■□□□□ 0.09
DNMT1-202ENST00000359526 GGT6Q6P531 493 aa15.61■□□□□ 0.09
DNMT1-202ENST00000359526 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.61■□□□□ 0.09
DNMT1-202ENST00000359526 DCAF11Q8TEB1 546 aa15.61■□□□□ 0.09
DNMT1-202ENST00000359526 PKD2Q13563 968 aa15.61■□□□□ 0.09
DNMT1-202ENST00000359526 POLA1P09884 1462 aaPredicted RBP15.6■□□□□ 0.09
DNMT1-202ENST00000359526 KTN1Q86UP2 1357 aaKnown RBP15.6■□□□□ 0.09
DNMT1-202ENST00000359526 HSCBQ8IWL3 235 aa15.6■□□□□ 0.09
DNMT1-202ENST00000359526 WASHC2CQ9Y4E1 1318 aa15.6■□□□□ 0.09
DNMT1-202ENST00000359526 RALBP1Q15311 655 aa15.6■□□□□ 0.09
DNMT1-202ENST00000359526 CALD1Q05682 793 aaKnown RBP15.6■□□□□ 0.09
DNMT1-202ENST00000359526 EHBP1L1Q8N3D4 1523 aa15.59■□□□□ 0.09
DNMT1-202ENST00000359526 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.092e-7■■■■■ 31.8
DNMT1-202ENST00000359526 RAB3GAP2Q9H2M9 1393 aa15.58■□□□□ 0.08
DNMT1-202ENST00000359526 KIAA0586Q9BVV6 1533 aa15.58■□□□□ 0.08
DNMT1-202ENST00000359526 TCERG1O14776 1098 aaKnown RBP15.58■□□□□ 0.08
DNMT1-202ENST00000359526 KIF3BO15066 747 aa15.58■□□□□ 0.08
DNMT1-202ENST00000359526 MPHOSPH9Q99550 1183 aa15.57■□□□□ 0.08
DNMT1-202ENST00000359526 PTMSP20962 102 aa15.57■□□□□ 0.08
DNMT1-202ENST00000359526 SYNJ1O43426 1573 aa15.56■□□□□ 0.08
DNMT1-202ENST00000359526 GOLGA6L6A8MZA4 724 aa15.56■□□□□ 0.08
DNMT1-202ENST00000359526 PRG4Q92954 1404 aaPredicted RBP15.55■□□□□ 0.08
DNMT1-202ENST00000359526 SNAPC4Q5SXM2 1469 aa15.55■□□□□ 0.08
DNMT1-202ENST00000359526 KANK4Q5T7N3 995 aaPredicted RBP15.54■□□□□ 0.08
DNMT1-202ENST00000359526 CCDC144AA2RUR9 1427 aa15.53■□□□□ 0.08
DNMT1-202ENST00000359526 ZBTB7CA1YPR0 619 aa15.53■□□□□ 0.08
DNMT1-202ENST00000359526 VGFO15240 615 aaPredicted RBP15.53■□□□□ 0.08
DNMT1-202ENST00000359526 MIA2Q96PC5 1412 aa15.53■□□□□ 0.08
DNMT1-202ENST00000359526 PRDM2Q13029 1718 aa15.53■□□□□ 0.08
DNMT1-202ENST00000359526 U2SURPO15042 1029 aaKnown RBP15.53■□□□□ 0.08
DNMT1-202ENST00000359526 TERF2IPQ9NYB0 399 aa15.52■□□□□ 0.08
DNMT1-202ENST00000359526 RCAN3Q9UKA8 241 aa15.52■□□□□ 0.08
DNMT1-202ENST00000359526 MLECQ14165 292 aa15.52■□□□□ 0.08
DNMT1-202ENST00000359526 POGZQ7Z3K3 1410 aa15.51■□□□□ 0.07
DNMT1-202ENST00000359526 NRDCO43847 1150 aa15.51■□□□□ 0.07
DNMT1-202ENST00000359526 MORC1Q86VD1 984 aa15.51■□□□□ 0.07
DNMT1-202ENST00000359526 MCCP23508 829 aa15.51■□□□□ 0.07
DNMT1-202ENST00000359526 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
DNMT1-202ENST00000359526 IPO8O15397 1037 aaKnown RBP15.5■□□□□ 0.07
DNMT1-202ENST00000359526 SRPK2P78362 688 aaKnown RBP15.5■□□□□ 0.07
DNMT1-202ENST00000359526 HNRNPMP52272 730 aaKnown RBP eCLIP15.5■□□□□ 0.07
DNMT1-202ENST00000359526 UNC13AQ9UPW8 1703 aa15.49■□□□□ 0.07
DNMT1-202ENST00000359526 PHLDB1Q86UU1 1377 aa15.49■□□□□ 0.07
DNMT1-202ENST00000359526 PDE3BQ13370 1112 aa15.49■□□□□ 0.07
DNMT1-202ENST00000359526 NESP48681 1621 aa15.48■□□□□ 0.07
DNMT1-202ENST00000359526 MSNP26038 577 aaKnown RBP15.48■□□□□ 0.07
DNMT1-202ENST00000359526 CYB5RLQ6IPT4 315 aa15.47■□□□□ 0.07
DNMT1-202ENST00000359526 RWDD1Q9H446 243 aaPredicted RBP15.47■□□□□ 0.07
DNMT1-202ENST00000359526 HDAC5Q9UQL6 1122 aa15.47■□□□□ 0.07
DNMT1-202ENST00000359526 IQGAP2Q13576 1575 aa15.47■□□□□ 0.07
DNMT1-202ENST00000359526 FGD6Q6ZV73 1430 aa15.47■□□□□ 0.07
DNMT1-202ENST00000359526 PLCB2Q00722 1185 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms