RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 PCGF6Q9BYE7 350 aa6.45□□□□□ -1.38
CNGA1-201ENST00000358519 RIMBP3CA6NJZ7 1639 aa6.44□□□□□ -1.38
CNGA1-201ENST00000358519 RIMBP3BA6NNM3 1639 aa6.44□□□□□ -1.38
CNGA1-201ENST00000358519 RIMBP3Q9UFD9 1639 aa6.44□□□□□ -1.38
CNGA1-201ENST00000358519 ZBTB47Q9UFB7 747 aaPredicted RBP6.44□□□□□ -1.38
CNGA1-201ENST00000358519 HOXB3P14651 431 aaPredicted RBP6.43□□□□□ -1.38
CNGA1-201ENST00000358519 FAM212AQ96EL1 285 aa6.43□□□□□ -1.38
CNGA1-201ENST00000358519 WDR62O43379 1518 aa6.42□□□□□ -1.38
CNGA1-201ENST00000358519 ZNF710Q8N1W2 664 aa6.41□□□□□ -1.38
CNGA1-201ENST00000358519 EEA1Q15075 1411 aa6.4□□□□□ -1.38
CNGA1-201ENST00000358519 DOK7Q18PE1 504 aa6.4□□□□□ -1.39
CNGA1-201ENST00000358519 CYB5RLQ6IPT4 315 aa6.39□□□□□ -1.39
CNGA1-201ENST00000358519 WDR97A6NE52 1622 aa6.39□□□□□ -1.39
CNGA1-201ENST00000358519 CADPSQ9ULU8 1353 aa6.39□□□□□ -1.39
CNGA1-201ENST00000358519 ARHGEF11O15085 1522 aa6.39□□□□□ -1.39
CNGA1-201ENST00000358519 MKRN3Q13064 507 aaKnown RBP6.39□□□□□ -1.39
CNGA1-201ENST00000358519 ZNF687Q8N1G0 1237 aa6.39□□□□□ -1.39
CNGA1-201ENST00000358519 BIVM-ERCC5R4GMW8 1640 aa6.38□□□□□ -1.39
CNGA1-201ENST00000358519 PLCD3Q8N3E9 789 aa6.37□□□□□ -1.39
CNGA1-201ENST00000358519 VARS2Q5ST30 1063 aaKnown RBP6.37□□□□□ -1.39
CNGA1-201ENST00000358519 PLA2G2EQ9NZK7 142 aa6.37□□□□□ -1.39
CNGA1-201ENST00000358519 CEP164Q9UPV0 1460 aa6.37□□□□□ -1.39
CNGA1-201ENST00000358519 GOLGA2Q08379 1002 aa6.36□□□□□ -1.39
CNGA1-201ENST00000358519 ABCC8Q09428 1581 aa6.36□□□□□ -1.39
CNGA1-201ENST00000358519 CCDC88BA6NC98 1476 aa6.36□□□□□ -1.39
CNGA1-201ENST00000358519 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.35□□□□□ -1.39
CNGA1-201ENST00000358519 RIMBP2O15034 1052 aa6.35□□□□□ -1.39
CNGA1-201ENST00000358519 PCDHB8Q9UN66 801 aa6.33□□□□□ -1.4
CNGA1-201ENST00000358519 CFTRP13569 1480 aa6.33□□□□□ -1.4
CNGA1-201ENST00000358519 G3V3G9 751 aa6.32□□□□□ -1.4
CNGA1-201ENST00000358519 DCAF8Q5TAQ9 597 aa6.32□□□□□ -1.4
CNGA1-201ENST00000358519 TOP2BQ02880 1626 aa6.32□□□□□ -1.4
CNGA1-201ENST00000358519 ZSWIM6Q9HCJ5 1215 aa6.31□□□□□ -1.4
CNGA1-201ENST00000358519 ILDR1Q86SU0 546 aaPredicted RBP6.31□□□□□ -1.4
CNGA1-201ENST00000358519 FANCD2Q9BXW9 1451 aa6.31□□□□□ -1.4
CNGA1-201ENST00000358519 PYGBP11216 843 aa6.29□□□□□ -1.4
CNGA1-201ENST00000358519 ANKRD13DQ6ZTN6 518 aa6.29□□□□□ -1.4
CNGA1-201ENST00000358519 HCSTQ9UBK5 93 aa6.29□□□□□ -1.4
CNGA1-201ENST00000358519 ARAP1Q96P48 1450 aa6.29□□□□□ -1.4
CNGA1-201ENST00000358519 BOLA1Q9Y3E2 137 aa6.29□□□□□ -1.4
CNGA1-201ENST00000358519 ZNF467Q7Z7K2 595 aaPredicted RBP6.28□□□□□ -1.4
CNGA1-201ENST00000358519 SUPT5HO00267 1087 aaKnown RBP6.27□□□□□ -1.41
CNGA1-201ENST00000358519 CSRNP3Q8WYN3 585 aa6.27□□□□□ -1.41
CNGA1-201ENST00000358519 KIF21BO75037 1637 aa6.27□□□□□ -1.41
CNGA1-201ENST00000358519 IFT140Q96RY7 1462 aa6.26□□□□□ -1.41
CNGA1-201ENST00000358519 RGS20O76081 388 aa6.26□□□□□ -1.41
CNGA1-201ENST00000358519 TTBK1Q5TCY1 1321 aaPredicted RBP6.25□□□□□ -1.41
CNGA1-201ENST00000358519 DPY19L2Q6NUT2 758 aa6.25□□□□□ -1.41
CNGA1-201ENST00000358519 DNMBPQ6XZF7 1577 aa6.24□□□□□ -1.41
CNGA1-201ENST00000358519 ERICH3Q5RHP9 1530 aa6.24□□□□□ -1.41
CNGA1-201ENST00000358519 URB2Q14146 1524 aaKnown RBP6.24□□□□□ -1.41
CNGA1-201ENST00000358519 LSM11P83369 360 aaKnown RBP eCLIP6.23□□□□□ -1.41
CNGA1-201ENST00000358519 ACIN1Q9UKV3 1341 aaKnown RBP6.22□□□□□ -1.41
CNGA1-201ENST00000358519 WRNQ14191 1432 aaPredicted RBP eCLIP6.22□□□□□ -1.41
CNGA1-201ENST00000358519 GPR153Q6NV75 609 aa6.22□□□□□ -1.41
CNGA1-201ENST00000358519 CUL7Q14999 1698 aa6.22□□□□□ -1.41
CNGA1-201ENST00000358519 ZNF608Q9ULD9 1512 aaPredicted RBP6.21□□□□□ -1.41
CNGA1-201ENST00000358519 PSEN1P49768 467 aa6.21□□□□□ -1.42
CNGA1-201ENST00000358519 IRX2Q9BZI1 471 aaPredicted RBP6.2□□□□□ -1.42
CNGA1-201ENST00000358519 NEUROD1Q13562 356 aa6.2□□□□□ -1.42
CNGA1-201ENST00000358519 ZEB1P37275 1124 aaPredicted RBP6.19□□□□□ -1.42
CNGA1-201ENST00000358519 GTF3C3Q9Y5Q9 886 aa6.19□□□□□ -1.42
CNGA1-201ENST00000358519 CHD1O14646 1710 aa6.19□□□□□ -1.42
CNGA1-201ENST00000358519 CHRM1P11229 460 aaPredicted RBP6.18□□□□□ -1.42
CNGA1-201ENST00000358519 PBX2P40425 430 aa6.18□□□□□ -1.42
CNGA1-201ENST00000358519 EIF4G3O43432 1585 aaKnown RBP6.18□□□□□ -1.42
CNGA1-201ENST00000358519 TRIM26Q12899 539 aaPredicted RBP6.17□□□□□ -1.42
CNGA1-201ENST00000358519 SYNJ1O43426 1573 aa6.17□□□□□ -1.42
CNGA1-201ENST00000358519 ZNF316A6NFI3 1004 aaPredicted RBP6.17□□□□□ -1.42
CNGA1-201ENST00000358519 GSE1Q14687 1217 aa6.14□□□□□ -1.43
CNGA1-201ENST00000358519 ABCA10Q8WWZ4 1543 aa6.14□□□□□ -1.43
CNGA1-201ENST00000358519 CUX1P39880 1505 aa6.14□□□□□ -1.43
CNGA1-201ENST00000358519 BCL11AQ9H165 835 aa6.14□□□□□ -1.43
CNGA1-201ENST00000358519 PDAP1Q13442 181 aaKnown RBP6.13□□□□□ -1.43
CNGA1-201ENST00000358519 CHMP7Q8WUX9 453 aaPredicted RBP6.13□□□□□ -1.43
CNGA1-201ENST00000358519 GOLGA3Q08378 1498 aa6.13□□□□□ -1.43
CNGA1-201ENST00000358519 TOPBP1Q92547 1522 aa6.13□□□□□ -1.43
CNGA1-201ENST00000358519 AQRO60306 1485 aaKnown RBP eCLIP6.13□□□□□ -1.43
CNGA1-201ENST00000358519 ABCA5Q8WWZ7 1642 aa6.13□□□□□ -1.43
CNGA1-201ENST00000358519 CLASP1Q7Z460 1538 aa6.12□□□□□ -1.43
CNGA1-201ENST00000358519 ARSIQ5FYB1 569 aa6.12□□□□□ -1.43
CNGA1-201ENST00000358519 KIF27Q86VH2 1401 aa6.12□□□□□ -1.43
CNGA1-201ENST00000358519 GAPVD1Q14C86 1478 aa6.12□□□□□ -1.43
CNGA1-201ENST00000358519 CENPBP07199 599 aaPredicted RBP6.12□□□□□ -1.43
CNGA1-201ENST00000358519 TNIKQ9UKE5 1360 aa6.11□□□□□ -1.43
CNGA1-201ENST00000358519 IFFO2Q5TF58 517 aa6.11□□□□□ -1.43
CNGA1-201ENST00000358519 CABP2Q9NPB3 220 aa6.11□□□□□ -1.43
CNGA1-201ENST00000358519 CTTNBP2Q8WZ74 1663 aa6.1□□□□□ -1.43
CNGA1-201ENST00000358519 EFCAB5A4FU69 1503 aa6.1□□□□□ -1.43
CNGA1-201ENST00000358519 PRXQ9BXM0 1461 aa6.09□□□□□ -1.43
CNGA1-201ENST00000358519 MAP3K1Q13233 1512 aa6.09□□□□□ -1.43
CNGA1-201ENST00000358519 TARBP1Q13395 1621 aaKnown RBP6.09□□□□□ -1.44
CNGA1-201ENST00000358519 TMEM92Q6UXU6 159 aa6.09□□□□□ -1.44
CNGA1-201ENST00000358519 FAM9AQ8IZU1 332 aaPredicted RBP6.09□□□□□ -1.44
CNGA1-201ENST00000358519 PBRM1Q86U86 1689 aa6.09□□□□□ -1.44
CNGA1-201ENST00000358519 KDM4FA0A1W2PPD8 638 aa6.08□□□□□ -1.44
CNGA1-201ENST00000358519 SNAPC4Q5SXM2 1469 aa6.08□□□□□ -1.44
CNGA1-201ENST00000358519 MAGI1Q96QZ7 1491 aaPredicted RBP6.08□□□□□ -1.44
CNGA1-201ENST00000358519 FBXO41Q8TF61 875 aa6.07□□□□□ -1.44
CNGA1-201ENST00000358519 ERCC6L2Q5T890 1561 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms