RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 AEBP2Q6ZN18 517 aaPredicted RBP14.92□□□□□ -0.02
CNGA1-201ENST00000358519 CHIC1Q5VXU3 224 aa14.03□□□□□ -0.16
CNGA1-201ENST00000358519 SENP3Q9H4L4 574 aaPredicted RBP12.91□□□□□ -0.34
CNGA1-201ENST00000358519 PHF23Q9BUL5 403 aaPredicted RBP12.62□□□□□ -0.39
CNGA1-201ENST00000358519 POTEDQ86YR6 584 aa12.28□□□□□ -0.44
CNGA1-201ENST00000358519 FOXD1Q16676 465 aa12.05□□□□□ -0.48
CNGA1-201ENST00000358519 MSH5O43196 834 aa11.59□□□□□ -0.55
CNGA1-201ENST00000358519 PIAS4Q8N2W9 510 aaPredicted RBP11.11□□□□□ -0.63
CNGA1-201ENST00000358519 PPP6R1Q9UPN7 881 aa10.75□□□□□ -0.69
CNGA1-201ENST00000358519 ADRA2BP18089 450 aa10.7□□□□□ -0.7
CNGA1-201ENST00000358519 PLPPR3Q6T4P5 718 aa10.64□□□□□ -0.71
CNGA1-201ENST00000358519 CACNB1Q02641 598 aaPredicted RBP10.28□□□□□ -0.76
CNGA1-201ENST00000358519 DMRT2Q9Y5R5 561 aa10.13□□□□□ -0.79
CNGA1-201ENST00000358519 MAPK8IP2Q13387 824 aaPredicted RBP10□□□□□ -0.81
CNGA1-201ENST00000358519 SCAF1Q9H7N4 1312 aaKnown RBP9.92□□□□□ -0.82
CNGA1-201ENST00000358519 RNF39Q9H2S5 420 aa9.79□□□□□ -0.84
CNGA1-201ENST00000358519 DCAF8L1A6NGE4 600 aa9.69□□□□□ -0.86
CNGA1-201ENST00000358519 C1QBPQ07021 282 aaKnown RBP9.66□□□□□ -0.86
CNGA1-201ENST00000358519 HOXD11P31277 338 aaPredicted RBP9.53□□□□□ -0.88
CNGA1-201ENST00000358519 POTEHQ6S545 545 aa9.51□□□□□ -0.89
CNGA1-201ENST00000358519 DNAJC5BQ9UF47 199 aa9.4□□□□□ -0.9
CNGA1-201ENST00000358519 RNF216Q9NWF9 866 aaPredicted RBP9.3□□□□□ -0.92
CNGA1-201ENST00000358519 PPP4R3CPQ6ZMV5 832 aa9.22□□□□□ -0.93
CNGA1-201ENST00000358519 CNKSR2Q8WXI2 1034 aa9.22□□□□□ -0.93
CNGA1-201ENST00000358519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.06□□□□□ -0.96
CNGA1-201ENST00000358519 DSG3P32926 999 aa8.95□□□□□ -0.98
CNGA1-201ENST00000358519 CAPN15O75808 1086 aa8.85□□□□□ -0.99
CNGA1-201ENST00000358519 SPINK5Q9NQ38 1064 aaPredicted RBP8.79□□□□□ -1
CNGA1-201ENST00000358519 U3KPZ7 1027 aaPredicted RBP8.77□□□□□ -1.01
CNGA1-201ENST00000358519 NCBP3Q53F19 620 aaKnown RBP8.75□□□□□ -1.01
CNGA1-201ENST00000358519 SP7Q8TDD2 431 aaPredicted RBP8.64□□□□□ -1.03
CNGA1-201ENST00000358519 NISCHQ9Y2I1 1504 aa8.63□□□□□ -1.03
CNGA1-201ENST00000358519 RBM42Q9BTD8 480 aaKnown RBP8.62□□□□□ -1.03
CNGA1-201ENST00000358519 CHRDL2Q6WN34 429 aa8.62□□□□□ -1.03
CNGA1-201ENST00000358519 APLP2Q06481 763 aa8.6□□□□□ -1.03
CNGA1-201ENST00000358519 ZNF219Q9P2Y4 722 aaPredicted RBP8.57□□□□□ -1.04
CNGA1-201ENST00000358519 ABCB7O75027 752 aa8.55□□□□□ -1.04
CNGA1-201ENST00000358519 TRHP20396 242 aaPredicted RBP8.54□□□□□ -1.04
CNGA1-201ENST00000358519 NPM3O75607 178 aaKnown RBP8.53□□□□□ -1.04
CNGA1-201ENST00000358519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.4□□□□□ -1.06
CNGA1-201ENST00000358519 HNRNPUL2Q1KMD3 747 aaKnown RBP8.4□□□□□ -1.06
CNGA1-201ENST00000358519 SAMD1Q6SPF0 538 aaPredicted RBP8.3□□□□□ -1.08
CNGA1-201ENST00000358519 HAX1O00165 279 aa8.3□□□□□ -1.08
CNGA1-201ENST00000358519 SLC4A2P04920 1241 aa8.3□□□□□ -1.08
CNGA1-201ENST00000358519 AKT1S1Q96B36 256 aa8.28□□□□□ -1.08
CNGA1-201ENST00000358519 PIP4P2Q8N4L2 257 aa8.27□□□□□ -1.09
CNGA1-201ENST00000358519 POLA2Q14181 598 aa8.18□□□□□ -1.1
CNGA1-201ENST00000358519 REM2Q8IYK8 340 aaPredicted RBP8.16□□□□□ -1.1
CNGA1-201ENST00000358519 FXR2P51116 673 aaKnown RBP eCLIP8.16□□□□□ -1.1
CNGA1-201ENST00000358519 LHX8Q68G74 356 aa8.1□□□□□ -1.11
CNGA1-201ENST00000358519 EVX2Q03828 476 aa8.09□□□□□ -1.11
CNGA1-201ENST00000358519 ZBTB12Q9Y330 459 aaPredicted RBP8.07□□□□□ -1.12
CNGA1-201ENST00000358519 PLSCR2Q9NRY7 297 aa8.06□□□□□ -1.12
CNGA1-201ENST00000358519 PITPNM1O00562 1244 aa8.06□□□□□ -1.12
CNGA1-201ENST00000358519 MYCNP04198 464 aaPredicted RBP7.95□□□□□ -1.14
CNGA1-201ENST00000358519 GABBR2O75899 941 aa7.94□□□□□ -1.14
CNGA1-201ENST00000358519 C19orf67A6NJJ6 358 aa7.92□□□□□ -1.14
CNGA1-201ENST00000358519 OSCARQ8IYS5 282 aa7.92□□□□□ -1.14
CNGA1-201ENST00000358519 PRKAR2AP13861 404 aaKnown RBP7.85□□□□□ -1.15
CNGA1-201ENST00000358519 CCDC180Q9P1Z9 1646 aa7.83□□□□□ -1.16
CNGA1-201ENST00000358519 KCNA4P22459 653 aa7.79□□□□□ -1.16
CNGA1-201ENST00000358519 ABCC9O60706 1549 aa7.78□□□□□ -1.16
CNGA1-201ENST00000358519 SPDYE1Q8NFV5 336 aaPredicted RBP7.75□□□□□ -1.17
CNGA1-201ENST00000358519 SPDYE2BA6NHP3 402 aa7.73□□□□□ -1.17
CNGA1-201ENST00000358519 SPDYE6P0CI01 402 aa7.73□□□□□ -1.17
CNGA1-201ENST00000358519 SPDYE2Q495Y8 402 aa7.73□□□□□ -1.17
CNGA1-201ENST00000358519 POTEIP0CG38 1075 aa7.73□□□□□ -1.17
CNGA1-201ENST00000358519 ATF5Q9Y2D1 282 aaPredicted RBP7.73□□□□□ -1.17
CNGA1-201ENST00000358519 CLCN6P51797 869 aa7.72□□□□□ -1.17
CNGA1-201ENST00000358519 CLEC11AQ9Y240 323 aa7.7□□□□□ -1.18
CNGA1-201ENST00000358519 PCDH10Q9P2E7 1040 aa7.66□□□□□ -1.18
CNGA1-201ENST00000358519 POTEMA6NI47 508 aa7.64□□□□□ -1.19
CNGA1-201ENST00000358519 DCBLD2Q96PD2 775 aa7.61□□□□□ -1.19
CNGA1-201ENST00000358519 POTEGQ6S5H5 508 aa7.6□□□□□ -1.19
CNGA1-201ENST00000358519 CHADLQ6NUI6 762 aa7.59□□□□□ -1.19
CNGA1-201ENST00000358519 FBLN2P98095 1184 aa7.58□□□□□ -1.2
CNGA1-201ENST00000358519 CD44P16070 742 aaKnown RBP7.57□□□□□ -1.2
CNGA1-201ENST00000358519 OTUD5Q96G74 571 aa7.57□□□□□ -1.2
CNGA1-201ENST00000358519 SSUH2Q9Y2M2 353 aa7.53□□□□□ -1.2
CNGA1-201ENST00000358519 PRR29P0C7W0 189 aa7.52□□□□□ -1.21
CNGA1-201ENST00000358519 FOXD4L1Q9NU39 408 aa7.52□□□□□ -1.21
CNGA1-201ENST00000358519 ZNF692Q9BU19 519 aaPredicted RBP7.5□□□□□ -1.21
CNGA1-201ENST00000358519 FARP1Q9Y4F1 1045 aaPredicted RBP7.48□□□□□ -1.21
CNGA1-201ENST00000358519 ZNF579Q8NAF0 562 aaKnown RBP7.46□□□□□ -1.22
CNGA1-201ENST00000358519 POTEB2H3BUK9 544 aa7.44□□□□□ -1.22
CNGA1-201ENST00000358519 DCAF1Q9Y4B6 1507 aa7.43□□□□□ -1.22
CNGA1-201ENST00000358519 ATXN8OSP0DMR3 200 aa7.42□□□□□ -1.22
CNGA1-201ENST00000358519 MYO15BQ96JP2 1530 aa7.4□□□□□ -1.22
CNGA1-201ENST00000358519 ZRANB1Q9UGI0 708 aa7.38□□□□□ -1.23
CNGA1-201ENST00000358519 MKRN4PQ13434 485 aaPredicted RBP7.36□□□□□ -1.23
CNGA1-201ENST00000358519 PABPN1Q86U42 306 aaKnown RBP eCLIP7.36□□□□□ -1.23
CNGA1-201ENST00000358519 MAMSTRQ6ZN01 415 aa7.35□□□□□ -1.23
CNGA1-201ENST00000358519 GALR2O43603 387 aaPredicted RBP7.34□□□□□ -1.23
CNGA1-201ENST00000358519 RB1CC1Q8TDY2 1594 aa7.3□□□□□ -1.24
CNGA1-201ENST00000358519 ZCCHC6Q5VYS8 1495 aaKnown RBP7.3□□□□□ -1.24
CNGA1-201ENST00000358519 DNAJC5Q9H3Z4 198 aa7.3□□□□□ -1.24
CNGA1-201ENST00000358519 LCE2DQ5TA82 110 aaPredicted RBP7.3□□□□□ -1.24
CNGA1-201ENST00000358519 FAM163AQ96GL9 167 aaPredicted RBP7.3□□□□□ -1.24
CNGA1-201ENST00000358519 SLC4A1APQ9BWU0 796 aaKnown RBP7.28□□□□□ -1.24
CNGA1-201ENST00000358519 PELP1Q8IZL8 1130 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms