RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 NPM1P06748 294 aaKnown RBP eCLIP25.58■■□□□ 1.69
TPM1-205ENST00000357980 HRCP23327 699 aa25.58■■□□□ 1.69
TPM1-205ENST00000357980 CYB5RLQ6IPT4 315 aa25.58■■□□□ 1.69
TPM1-205ENST00000357980 ABCA9Q8IUA7 1624 aa25.58■■□□□ 1.69
TPM1-205ENST00000357980 DAPK1P53355 1430 aa25.57■■□□□ 1.68
TPM1-205ENST00000357980 SAMD9LQ8IVG5 1584 aa25.56■■□□□ 1.68
TPM1-205ENST00000357980 ABCC5O15440 1437 aa25.55■■□□□ 1.68
TPM1-205ENST00000357980 CROCC2H7BZ55 1655 aa25.55■■□□□ 1.68
TPM1-205ENST00000357980 SETD5Q9C0A6 1442 aa25.55■■□□□ 1.68
TPM1-205ENST00000357980 ARHGAP5Q13017 1502 aa25.54■■□□□ 1.68
TPM1-205ENST00000357980 HFM1A2PYH4 1435 aa25.53■■□□□ 1.68
TPM1-205ENST00000357980 PLCH2O75038 1416 aa25.53■■□□□ 1.68
TPM1-205ENST00000357980 ARAP3Q8WWN8 1544 aa25.53■■□□□ 1.68
TPM1-205ENST00000357980 MAPKBP1O60336 1514 aa25.53■■□□□ 1.68
TPM1-205ENST00000357980 RAB3GAP2Q9H2M9 1393 aa25.52■■□□□ 1.68
TPM1-205ENST00000357980 AKNAQ7Z591 1439 aa25.52■■□□□ 1.68
TPM1-205ENST00000357980 ZNF777Q9ULD5 760 aaPredicted RBP25.51■■□□□ 1.67
TPM1-205ENST00000357980 ARHGEF5Q12774 1597 aa25.5■■□□□ 1.67
TPM1-205ENST00000357980 GCC2Q8IWJ2 1684 aa25.49■■□□□ 1.67
TPM1-205ENST00000357980 CCER1Q8TC90 406 aaPredicted RBP25.49■■□□□ 1.67
TPM1-205ENST00000357980 NAIPQ13075 1403 aa25.48■■□□□ 1.67
TPM1-205ENST00000357980 MBD5Q9P267 1494 aa25.47■■□□□ 1.67
TPM1-205ENST00000357980 ROCK1Q13464 1354 aa25.46■■□□□ 1.67
TPM1-205ENST00000357980 ADGBQ8N7X0 1667 aa25.46■■□□□ 1.67
TPM1-205ENST00000357980 SHANK2Q9UPX8 1470 aa25.44■■□□□ 1.66
TPM1-205ENST00000357980 SYCP2Q9BX26 1530 aa25.43■■□□□ 1.66
TPM1-205ENST00000357980 PLEKHH2Q8IVE3 1493 aa25.43■■□□□ 1.66
TPM1-205ENST00000357980 CHIC2Q9UKJ5 165 aa25.42■■□□□ 1.66
TPM1-205ENST00000357980 KIAA1107Q9UPP5 1409 aa25.42■■□□□ 1.66
TPM1-205ENST00000357980 ADGRL2O95490 1459 aa25.41■■□□□ 1.66
TPM1-205ENST00000357980 ABCC1P33527 1531 aa25.4■■□□□ 1.66
TPM1-205ENST00000357980 DHX57Q6P158 1386 aaKnown RBP25.39■■□□□ 1.66
TPM1-205ENST00000357980 CCDC141Q6ZP82 1450 aa25.39■■□□□ 1.66
TPM1-205ENST00000357980 EFCAB2Q5VUJ9 269 aa25.39■■□□□ 1.65
TPM1-205ENST00000357980 HNRNPMP52272 730 aaKnown RBP eCLIP25.37■■□□□ 1.65
TPM1-205ENST00000357980 ARHGEF12Q9NZN5 1544 aa25.37■■□□□ 1.65
TPM1-205ENST00000357980 RRP7BPQ9NSQ0 103 aa25.37■■□□□ 1.65
TPM1-205ENST00000357980 NCOA1Q15788 1441 aa25.36■■□□□ 1.65
TPM1-205ENST00000357980 FANCAO15360 1455 aa25.36■■□□□ 1.65
TPM1-205ENST00000357980 C9orf84Q5VXU9 1444 aa25.35■■□□□ 1.65
TPM1-205ENST00000357980 ZEB1P37275 1124 aaPredicted RBP25.35■■□□□ 1.65
TPM1-205ENST00000357980 KDM6BO15054 1643 aa25.34■■□□□ 1.65
TPM1-205ENST00000357980 RSPH4AQ5TD94 716 aa25.34■■□□□ 1.65
TPM1-205ENST00000357980 GLI2P10070 1586 aa25.33■■□□□ 1.65
TPM1-205ENST00000357980 MAST1Q9Y2H9 1570 aa25.33■■□□□ 1.65
TPM1-205ENST00000357980 CD109Q6YHK3 1445 aa25.32■■□□□ 1.64
TPM1-205ENST00000357980 MAP3K4Q9Y6R4 1608 aa25.31■■□□□ 1.64
TPM1-205ENST00000357980 ANKRD30AQ9BXX3 1397 aa25.3■■□□□ 1.64
TPM1-205ENST00000357980 CFAP74Q9C0B2 1584 aa25.3■■□□□ 1.64
TPM1-205ENST00000357980 DIP2BQ9P265 1576 aa25.29■■□□□ 1.64
TPM1-205ENST00000357980 TSPY4P0CV99 314 aa25.28■■□□□ 1.64
TPM1-205ENST00000357980 TSPY10P0CW01 314 aa25.28■■□□□ 1.64
TPM1-205ENST00000357980 CLSPNQ9HAW4 1339 aa25.26■■□□□ 1.63
TPM1-205ENST00000357980 TRAPPC8Q9Y2L5 1435 aa25.25■■□□□ 1.63
TPM1-205ENST00000357980 ADGRL1O94910 1474 aa25.24■■□□□ 1.63
TPM1-205ENST00000357980 PLXNC1O60486 1568 aa25.24■■□□□ 1.63
TPM1-205ENST00000357980 KIF15Q9NS87 1388 aa25.19■■□□□ 1.62
TPM1-205ENST00000357980 SCAPERQ9BY12 1400 aa25.18■■□□□ 1.62
TPM1-205ENST00000357980 NEO1Q92859 1461 aa25.18■■□□□ 1.62
TPM1-205ENST00000357980 ANKRD50Q9ULJ7 1429 aa25.18■■□□□ 1.62
TPM1-205ENST00000357980 ZFYVE16Q7Z3T8 1539 aa25.17■■□□□ 1.62
TPM1-205ENST00000357980 ACIN1Q9UKV3 1341 aaKnown RBP25.16■■□□□ 1.62
TPM1-205ENST00000357980 INO80Q9ULG1 1556 aaPredicted RBP25.16■■□□□ 1.62
TPM1-205ENST00000357980 KIF13AQ9H1H9 1805 aa25.16■■□□□ 1.62
TPM1-205ENST00000357980 RTEL1-TNFRSF6BF6WH68 1400 aa25.15■■□□□ 1.62
TPM1-205ENST00000357980 FAM69CQ0P6D2 419 aa25.13■■□□□ 1.61
TPM1-205ENST00000357980 AFAP1Q8N556 730 aa25.13■■□□□ 1.61
TPM1-205ENST00000357980 PPRC1Q5VV67 1664 aaKnown RBP25.13■■□□□ 1.61
TPM1-205ENST00000357980 ZNF518AQ6AHZ1 1483 aa25.11■■□□□ 1.61
TPM1-205ENST00000357980 ATP7AQ04656 1500 aa25.1■■□□□ 1.61
TPM1-205ENST00000357980 KDM5CP41229 1560 aa25.1■■□□□ 1.61
TPM1-205ENST00000357980 DUOX2Q9NRD8 1548 aa25.1■■□□□ 1.61
TPM1-205ENST00000357980 DENND4BO75064 1496 aaPredicted RBP25.1■■□□□ 1.61
TPM1-205ENST00000357980 POGZQ7Z3K3 1410 aa25.1■■□□□ 1.61
TPM1-205ENST00000357980 SPAG9O60271 1321 aaKnown RBP25.1■■□□□ 1.61
TPM1-205ENST00000357980 TSPOAP1O95153 1857 aa25.07■■□□□ 1.6
TPM1-205ENST00000357980 TRIM52Q96A61 297 aa25.07■■□□□ 1.6
TPM1-205ENST00000357980 KIDINS220Q9ULH0 1771 aa25.06■■□□□ 1.6
TPM1-205ENST00000357980 PZPP20742 1482 aa25.04■■□□□ 1.6
TPM1-205ENST00000357980 KDM5DQ9BY66 1539 aa25.04■■□□□ 1.6
TPM1-205ENST00000357980 ERBINQ96RT1 1412 aa25.03■■□□□ 1.6
TPM1-205ENST00000357980 RICTORQ6R327 1708 aa25.03■■□□□ 1.6
TPM1-205ENST00000357980 UNC13BO14795 1591 aa25.02■■□□□ 1.6
TPM1-205ENST00000357980 TEX14Q8IWB6 1497 aa25.01■■□□□ 1.59
TPM1-205ENST00000357980 MPHOSPH9Q99550 1183 aa25.01■■□□□ 1.59
TPM1-205ENST00000357980 DNAJC5Q9H3Z4 198 aa25.01■■□□□ 1.59
TPM1-205ENST00000357980 HECW2Q9P2P5 1572 aa25.01■■□□□ 1.59
TPM1-205ENST00000357980 MLH3Q9UHC1 1453 aa25■■□□□ 1.59
TPM1-205ENST00000357980 FRMPD1Q5SYB0 1578 aa24.97■■□□□ 1.59
TPM1-205ENST00000357980 MAGI2Q86UL8 1455 aa24.96■■□□□ 1.59
TPM1-205ENST00000357980 EIF2AK4Q9P2K8 1649 aaKnown RBP24.94■■□□□ 1.58
TPM1-205ENST00000357980 NUP155O75694 1391 aa24.93■■□□□ 1.58
TPM1-205ENST00000357980 SLC4A1APQ9BWU0 796 aaKnown RBP24.93■■□□□ 1.58
TPM1-205ENST00000357980 RAPGEF3O95398 923 aa24.92■■□□□ 1.58
TPM1-205ENST00000357980 DEPDC5O75140 1603 aa24.92■■□□□ 1.58
TPM1-205ENST00000357980 ABCA6Q8N139 1617 aa24.92■■□□□ 1.58
TPM1-205ENST00000357980 IQGAP3Q86VI3 1631 aa24.91■■□□□ 1.58
TPM1-205ENST00000357980 SIN3AQ96ST3 1273 aa24.91■■□□□ 1.58
TPM1-205ENST00000357980 ZMYM4Q5VZL5 1548 aa24.91■■□□□ 1.58
TPM1-205ENST00000357980 FAM135AQ9P2D6 1515 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms