RNA–Protein interactions for RNA: ENST00000357248.8

SMARCA2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMARCA2, Length 5,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-204ENST00000357248 DRC7Q8IY82 874 aa17.7■□□□□ 0.42
SMARCA2-204ENST00000357248 RAPGEF2Q9Y4G8 1499 aa17.7■□□□□ 0.42
SMARCA2-204ENST00000357248 PLEKHD1A6NEE1 506 aa17.69■□□□□ 0.42
SMARCA2-204ENST00000357248 GNL2Q13823 731 aaKnown RBP17.68■□□□□ 0.42
SMARCA2-204ENST00000357248 MCCP23508 829 aa17.68■□□□□ 0.42
SMARCA2-204ENST00000357248 MIER1Q8N108 512 aa17.67■□□□□ 0.42
SMARCA2-204ENST00000357248 CFTRP13569 1480 aa17.66■□□□□ 0.42
SMARCA2-204ENST00000357248 NOC3LQ8WTT2 800 aaKnown RBP17.66■□□□□ 0.42
SMARCA2-204ENST00000357248 U2SURPO15042 1029 aaKnown RBP17.65■□□□□ 0.42
SMARCA2-204ENST00000357248 HSCBQ8IWL3 235 aa17.65■□□□□ 0.42
SMARCA2-204ENST00000357248 MSNP26038 577 aaKnown RBP17.65■□□□□ 0.42
SMARCA2-204ENST00000357248 CARD11Q9BXL7 1154 aa17.65■□□□□ 0.42
SMARCA2-204ENST00000357248 RTN4Q9NQC3 1192 aaKnown RBP17.64■□□□□ 0.41
SMARCA2-204ENST00000357248 AMER1Q5JTC6 1135 aaPredicted RBP17.61■□□□□ 0.41
SMARCA2-204ENST00000357248 PRXQ9BXM0 1461 aa17.61■□□□□ 0.41
SMARCA2-204ENST00000357248 SUPT16HQ9Y5B9 1047 aaKnown RBP17.6■□□□□ 0.41
SMARCA2-204ENST00000357248 CFAP44Q96MT7 982 aa17.57■□□□□ 0.4
SMARCA2-204ENST00000357248 CADPSQ9ULU8 1353 aa17.57■□□□□ 0.4
SMARCA2-204ENST00000357248 TMX4Q9H1E5 349 aaPredicted RBP17.55■□□□□ 0.4
SMARCA2-204ENST00000357248 NOP58Q9Y2X3 529 aaKnown RBP17.55■□□□□ 0.4
SMARCA2-204ENST00000357248 CUX1P39880 1505 aa17.54■□□□□ 0.4
SMARCA2-204ENST00000357248 PPP4R2Q9NY27 417 aa17.54■□□□□ 0.4
SMARCA2-204ENST00000357248 SOX12O15370 315 aa17.53■□□□□ 0.4
SMARCA2-204ENST00000357248 KIAA1211Q6ZU35 1233 aa17.52■□□□□ 0.4
SMARCA2-204ENST00000357248 CFDP1Q9UEE9 299 aaPredicted RBP17.52■□□□□ 0.4
SMARCA2-204ENST00000357248 CC2D1BQ5T0F9 858 aaKnown RBP17.52■□□□□ 0.4
SMARCA2-204ENST00000357248 RTF1Q92541 710 aaKnown RBP17.51■□□□□ 0.39
SMARCA2-204ENST00000357248 A0A0U1RQG5 324 aaPredicted RBP17.51■□□□□ 0.39
SMARCA2-204ENST00000357248 HDGFP51858 240 aaKnown RBP17.5■□□□□ 0.39
SMARCA2-204ENST00000357248 HTATSF1O43719 755 aaKnown RBP17.5■□□□□ 0.39
SMARCA2-204ENST00000357248 CUX2O14529 1486 aa17.49■□□□□ 0.39
SMARCA2-204ENST00000357248 PDE4CQ08493 712 aa17.48■□□□□ 0.39
SMARCA2-204ENST00000357248 SPRYD3Q8NCJ5 442 aa17.48■□□□□ 0.39
SMARCA2-204ENST00000357248 TPM4P67936 248 aa17.47■□□□□ 0.39
SMARCA2-204ENST00000357248 ZNF330Q9Y3S2 320 aaPredicted RBP17.46■□□□□ 0.38
SMARCA2-204ENST00000357248 CCDC34Q96HJ3 373 aa17.45■□□□□ 0.38
SMARCA2-204ENST00000357248 SRPK2P78362 688 aaKnown RBP17.44■□□□□ 0.38
SMARCA2-204ENST00000357248 CARMIL1Q5VZK9 1371 aa17.44■□□□□ 0.38
SMARCA2-204ENST00000357248 APBB1O00213 710 aa17.43■□□□□ 0.38
SMARCA2-204ENST00000357248 GOLGA6L1Q8N7Z2 621 aa17.43■□□□□ 0.38
SMARCA2-204ENST00000357248 PRDM2Q13029 1718 aa17.43■□□□□ 0.38
SMARCA2-204ENST00000357248 TNNT3P45378 269 aaPredicted RBP17.43■□□□□ 0.38
SMARCA2-204ENST00000357248 CEP89Q96ST8 783 aa17.42■□□□□ 0.38
SMARCA2-204ENST00000357248 PTMSP20962 102 aa17.42■□□□□ 0.38
SMARCA2-204ENST00000357248 TMF1P82094 1093 aa17.42■□□□□ 0.38
SMARCA2-204ENST00000357248 ARAP1Q96P48 1450 aa17.42■□□□□ 0.38
SMARCA2-204ENST00000357248 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
SMARCA2-204ENST00000357248 CSB-PGBD3P0DP91 1061 aa17.41■□□□□ 0.38
SMARCA2-204ENST00000357248 MORC1Q86VD1 984 aa17.41■□□□□ 0.38
SMARCA2-204ENST00000357248 GORABQ5T7V8 394 aa17.4■□□□□ 0.38
SMARCA2-204ENST00000357248 RASSF8Q8NHQ8 419 aa17.4■□□□□ 0.38
SMARCA2-204ENST00000357248 GBP4Q96PP9 640 aa17.4■□□□□ 0.38
SMARCA2-204ENST00000357248 G3V3G9 751 aa17.39■□□□□ 0.37
SMARCA2-204ENST00000357248 DCAF8Q5TAQ9 597 aa17.39■□□□□ 0.37
SMARCA2-204ENST00000357248 HSP90B1P14625 803 aaKnown RBP17.39■□□□□ 0.37
SMARCA2-204ENST00000357248 IPO8O15397 1037 aaKnown RBP17.39■□□□□ 0.37
SMARCA2-204ENST00000357248 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
SMARCA2-204ENST00000357248 SYAP1Q96A49 352 aaPredicted RBP17.38■□□□□ 0.37
SMARCA2-204ENST00000357248 IGF1RP08069 1367 aa17.37■□□□□ 0.37
SMARCA2-204ENST00000357248 MLECQ14165 292 aa17.37■□□□□ 0.37
SMARCA2-204ENST00000357248 USP35Q9P2H5 1018 aa17.36■□□□□ 0.37
SMARCA2-204ENST00000357248 KANK1Q14678 1352 aa17.36■□□□□ 0.37
SMARCA2-204ENST00000357248 CCNB3Q8WWL7 1395 aa17.36■□□□□ 0.37
SMARCA2-204ENST00000357248 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
SMARCA2-204ENST00000357248 TAF7LQ5H9L4 462 aa17.35■□□□□ 0.37
SMARCA2-204ENST00000357248 B4GALNT3Q6L9W6 998 aa17.35■□□□□ 0.37
SMARCA2-204ENST00000357248 FANCD2Q9BXW9 1451 aa17.34■□□□□ 0.37
SMARCA2-204ENST00000357248 RRBP1Q9P2E9 1410 aaKnown RBP17.34■□□□□ 0.37
SMARCA2-204ENST00000357248 CCDC9Q9Y3X0 531 aaKnown RBP17.34■□□□□ 0.37
SMARCA2-204ENST00000357248 PAK3O75914 559 aaPredicted RBP17.33■□□□□ 0.37
SMARCA2-204ENST00000357248 KRI1Q8N9T8 703 aaKnown RBP17.33■□□□□ 0.37
SMARCA2-204ENST00000357248 SAFB2Q14151 953 aaKnown RBP eCLIP17.33■□□□□ 0.37
SMARCA2-204ENST00000357248 CHMP3Q9Y3E7 222 aa17.33■□□□□ 0.37
SMARCA2-204ENST00000357248 HDGFL2Q7Z4V5 671 aaPredicted RBP17.33■□□□□ 0.36
SMARCA2-204ENST00000357248 CREBRFQ8IUR6 639 aa17.33■□□□□ 0.36
SMARCA2-204ENST00000357248 CALD1Q05682 793 aaKnown RBP17.33■□□□□ 0.36
SMARCA2-204ENST00000357248 ARID3AQ99856 593 aa17.33■□□□□ 0.36
SMARCA2-204ENST00000357248 GPATCH3Q96I76 525 aa17.32■□□□□ 0.36
SMARCA2-204ENST00000357248 CHMP4AQ9BY43 222 aa17.32■□□□□ 0.36
SMARCA2-204ENST00000357248 MAP3K1Q13233 1512 aa17.32■□□□□ 0.36
SMARCA2-204ENST00000357248 ARHGAP35Q9NRY4 1499 aa17.32■□□□□ 0.36
SMARCA2-204ENST00000357248 TPM3P06753 285 aa17.32■□□□□ 0.36
SMARCA2-204ENST00000357248 MARCH6O60337 910 aa17.31■□□□□ 0.36
SMARCA2-204ENST00000357248 VPS53Q5VIR6 699 aa17.31■□□□□ 0.36
SMARCA2-204ENST00000357248 CC2D2AQ9P2K1 1620 aa17.3■□□□□ 0.36
SMARCA2-204ENST00000357248 KANK4Q5T7N3 995 aaPredicted RBP17.29■□□□□ 0.36
SMARCA2-204ENST00000357248 DCAF11Q8TEB1 546 aa17.29■□□□□ 0.36
SMARCA2-204ENST00000357248 HDAC5Q9UQL6 1122 aa17.28■□□□□ 0.36
SMARCA2-204ENST00000357248 CSPP1Q1MSJ5 1256 aa17.28■□□□□ 0.36
SMARCA2-204ENST00000357248 ITPRIPQ8IWB1 547 aa17.27■□□□□ 0.36
SMARCA2-204ENST00000357248 STK31Q9BXU1 1019 aa17.27■□□□□ 0.35
SMARCA2-204ENST00000357248 RWDD1Q9H446 243 aaPredicted RBP17.27■□□□□ 0.35
SMARCA2-204ENST00000357248 DNMBPQ6XZF7 1577 aa17.26■□□□□ 0.35
SMARCA2-204ENST00000357248 GZF1Q9H116 711 aaPredicted RBP17.26■□□□□ 0.35
SMARCA2-204ENST00000357248 TOMM22Q9NS69 142 aa17.26■□□□□ 0.35
SMARCA2-204ENST00000357248 STK26Q9P289 416 aa17.25■□□□□ 0.35
SMARCA2-204ENST00000357248 DHX57Q6P158 1386 aaKnown RBP17.24■□□□□ 0.35
SMARCA2-204ENST00000357248 FRAT2O75474 233 aaPredicted RBP17.24■□□□□ 0.35
SMARCA2-204ENST00000357248 TRIM6-TRIM34B2RNG4 842 aa17.24■□□□□ 0.35
SMARCA2-204ENST00000357248 SPAG9O60271 1321 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms