RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 JPH4Q96JJ6 628 aa24.76■■□□□ 1.55
GYPC-202ENST00000356887 ROCK1Q13464 1354 aa24.76■■□□□ 1.55
GYPC-202ENST00000356887 FKBP8Q14318 412 aa24.76■■□□□ 1.55
GYPC-202ENST00000356887 HSPA5P11021 654 aaKnown RBP24.74■■□□□ 1.55
GYPC-202ENST00000356887 DAPK1P53355 1430 aa24.74■■□□□ 1.55
GYPC-202ENST00000356887 NUP153P49790 1475 aaKnown RBP24.72■■□□□ 1.55
GYPC-202ENST00000356887 WASHC2AQ641Q2 1341 aa24.71■■□□□ 1.55
GYPC-202ENST00000356887 DNMT1P26358 1616 aaKnown RBP24.71■■□□□ 1.55
GYPC-202ENST00000356887 ABCC5O15440 1437 aa24.71■■□□□ 1.55
GYPC-202ENST00000356887 CLASP1Q7Z460 1538 aa24.69■■□□□ 1.54
GYPC-202ENST00000356887 SHROOM2Q13796 1616 aa24.69■■□□□ 1.54
GYPC-202ENST00000356887 RAPGEF6Q8TEU7 1601 aa24.69■■□□□ 1.54
GYPC-202ENST00000356887 L3MBTL2Q969R5 705 aa24.69■■□□□ 1.54
GYPC-202ENST00000356887 EIF4G2P78344 907 aaKnown RBP eCLIP24.68■■□□□ 1.542e-8■■■■■ 45.9
GYPC-202ENST00000356887 CARMIL2Q6F5E8 1435 aa24.68■■□□□ 1.54
GYPC-202ENST00000356887 BCANQ96GW7 911 aa24.68■■□□□ 1.54
GYPC-202ENST00000356887 ANKRD30BQ9BXX2 1392 aa24.67■■□□□ 1.54
GYPC-202ENST00000356887 NEFLP07196 543 aa24.65■■□□□ 1.54
GYPC-202ENST00000356887 FOXD1Q16676 465 aa24.65■■□□□ 1.54
GYPC-202ENST00000356887 PRG4Q92954 1404 aaPredicted RBP24.65■■□□□ 1.54
GYPC-202ENST00000356887 CDK11AQ9UQ88 783 aaPredicted RBP24.64■■□□□ 1.53
GYPC-202ENST00000356887 ZNF644Q9H582 1327 aaPredicted RBP24.64■■□□□ 1.53
GYPC-202ENST00000356887 RPRD2Q5VT52 1461 aaKnown RBP24.63■■□□□ 1.53
GYPC-202ENST00000356887 BCL11AQ9H165 835 aa24.62■■□□□ 1.53
GYPC-202ENST00000356887 CNTLNQ9NXG0 1405 aa24.58■■□□□ 1.53
GYPC-202ENST00000356887 TEX14Q8IWB6 1497 aa24.58■■□□□ 1.52
GYPC-202ENST00000356887 TROQ12816 1431 aaPredicted RBP24.57■■□□□ 1.52
GYPC-202ENST00000356887 NCOA1Q15788 1441 aa24.57■■□□□ 1.52
GYPC-202ENST00000356887 ERCC6L2Q5T890 1561 aa24.57■■□□□ 1.52
GYPC-202ENST00000356887 NBPF8Q3BBV2 869 aa24.55■■□□□ 1.52
GYPC-202ENST00000356887 C11orf95C9JLR9 678 aaPredicted RBP24.54■■□□□ 1.52
GYPC-202ENST00000356887 CCDC7Q96M83 1385 aa24.54■■□□□ 1.52
GYPC-202ENST00000356887 SLC4A1APQ9BWU0 796 aaKnown RBP24.54■■□□□ 1.52
GYPC-202ENST00000356887 HNRNPUQ00839 825 aaKnown RBP eCLIP24.52■■□□□ 1.52
GYPC-202ENST00000356887 CAMSAP2Q08AD1 1489 aa24.52■■□□□ 1.52
GYPC-202ENST00000356887 PLB1Q6P1J6 1458 aa24.51■■□□□ 1.51
GYPC-202ENST00000356887 ITSN2Q9NZM3 1697 aa24.5■■□□□ 1.51
GYPC-202ENST00000356887 PZPP20742 1482 aa24.5■■□□□ 1.51
GYPC-202ENST00000356887 GPATCH8Q9UKJ3 1502 aaKnown RBP24.5■■□□□ 1.51
GYPC-202ENST00000356887 CFDP1Q9UEE9 299 aaPredicted RBP24.49■■□□□ 1.51
GYPC-202ENST00000356887 ADCY10Q96PN6 1610 aa24.49■■□□□ 1.51
GYPC-202ENST00000356887 SPATA31E1Q6ZUB1 1445 aa24.49■■□□□ 1.51
GYPC-202ENST00000356887 ADGBQ8N7X0 1667 aa24.48■■□□□ 1.51
GYPC-202ENST00000356887 OSCARQ8IYS5 282 aa24.47■■□□□ 1.51
GYPC-202ENST00000356887 PRKCSHP14314 528 aaPredicted RBP24.47■■□□□ 1.51
GYPC-202ENST00000356887 PTPRGP23470 1445 aa24.46■■□□□ 1.51
GYPC-202ENST00000356887 ADGRL2O95490 1459 aa24.46■■□□□ 1.51
GYPC-202ENST00000356887 ABCA8O94911 1581 aa24.46■■□□□ 1.51
GYPC-202ENST00000356887 ERICH6Q7L0X2 663 aa24.46■■□□□ 1.51
GYPC-202ENST00000356887 KIF14Q15058 1648 aa24.45■■□□□ 1.5
GYPC-202ENST00000356887 PRKRIP1Q9H875 184 aaPredicted RBP24.44■■□□□ 1.5
GYPC-202ENST00000356887 POLR1AO95602 1720 aaPredicted RBP24.43■■□□□ 1.5
GYPC-202ENST00000356887 CCDC184Q52MB2 194 aa24.42■■□□□ 1.5
GYPC-202ENST00000356887 CROCC2H7BZ55 1655 aa24.42■■□□□ 1.5
GYPC-202ENST00000356887 KIF7Q2M1P5 1343 aa24.4■■□□□ 1.5
GYPC-202ENST00000356887 KIAA1107Q9UPP5 1409 aa24.4■■□□□ 1.5
GYPC-202ENST00000356887 MBD5Q9P267 1494 aa24.38■■□□□ 1.49
GYPC-202ENST00000356887 ZNF777Q9ULD5 760 aaPredicted RBP24.37■■□□□ 1.49
GYPC-202ENST00000356887 ANKRD30AQ9BXX3 1397 aa24.37■■□□□ 1.49
GYPC-202ENST00000356887 PKD2Q13563 968 aa24.32■■□□□ 1.48
GYPC-202ENST00000356887 MRS2Q9HD23 443 aa24.31■■□□□ 1.48
GYPC-202ENST00000356887 ANKRD50Q9ULJ7 1429 aa24.31■■□□□ 1.48
GYPC-202ENST00000356887 ABCC10Q5T3U5 1492 aa24.31■■□□□ 1.48
GYPC-202ENST00000356887 CDC42BPAQ5VT25 1732 aa24.3■■□□□ 1.48
GYPC-202ENST00000356887 RBM19Q9Y4C8 960 aaKnown RBP24.3■■□□□ 1.48
GYPC-202ENST00000356887 PLEKHD1A6NEE1 506 aa24.3■■□□□ 1.48
GYPC-202ENST00000356887 SHANK2Q9UPX8 1470 aa24.28■■□□□ 1.48
GYPC-202ENST00000356887 ATP10BO94823 1461 aa24.28■■□□□ 1.48
GYPC-202ENST00000356887 ERICH6BQ5W0A0 696 aa24.28■■□□□ 1.48
GYPC-202ENST00000356887 FAM9BQ8IZU0 186 aa24.28■■□□□ 1.48
GYPC-202ENST00000356887 ABCC2Q92887 1545 aa24.27■■□□□ 1.48
GYPC-202ENST00000356887 ZBED9Q6R2W3 1325 aa24.26■■□□□ 1.47
GYPC-202ENST00000356887 ANP32EQ9BTT0 268 aa24.25■■□□□ 1.47
GYPC-202ENST00000356887 USP47Q96K76 1375 aa24.24■■□□□ 1.47
GYPC-202ENST00000356887 BCORL1Q5H9F3 1711 aa24.24■■□□□ 1.47
GYPC-202ENST00000356887 IRX6P78412 446 aaPredicted RBP24.24■■□□□ 1.47
GYPC-202ENST00000356887 C9orf84Q5VXU9 1444 aa24.24■■□□□ 1.47
GYPC-202ENST00000356887 UHRF1BP1Q6BDS2 1440 aa24.23■■□□□ 1.47
GYPC-202ENST00000356887 DHX29Q7Z478 1369 aaKnown RBP24.23■■□□□ 1.47
GYPC-202ENST00000356887 KDM5CP41229 1560 aa24.22■■□□□ 1.47
GYPC-202ENST00000356887 ARID4BQ4LE39 1312 aaPredicted RBP24.21■■□□□ 1.47
GYPC-202ENST00000356887 KDM5DQ9BY66 1539 aa24.21■■□□□ 1.47
GYPC-202ENST00000356887 NUP155O75694 1391 aa24.21■■□□□ 1.47
GYPC-202ENST00000356887 UHRF1BP1LA0JNW5 1464 aa24.19■■□□□ 1.46
GYPC-202ENST00000356887 ZNF326Q5BKZ1 582 aaKnown RBP24.18■■□□□ 1.46
GYPC-202ENST00000356887 RALGAPBQ86X10 1494 aa24.17■■□□□ 1.46
GYPC-202ENST00000356887 TSPY4P0CV99 314 aa24.17■■□□□ 1.46
GYPC-202ENST00000356887 TSPY10P0CW01 314 aa24.17■■□□□ 1.46
GYPC-202ENST00000356887 ARHGEF12Q9NZN5 1544 aa24.17■■□□□ 1.46
GYPC-202ENST00000356887 ARHGEF5Q12774 1597 aa24.16■■□□□ 1.46
GYPC-202ENST00000356887 PPP4R2Q9NY27 417 aa24.15■■□□□ 1.46
GYPC-202ENST00000356887 ZCCHC11Q5TAX3 1644 aaKnown RBP24.15■■□□□ 1.46
GYPC-202ENST00000356887 KIF15Q9NS87 1388 aa24.12■■□□□ 1.45
GYPC-202ENST00000356887 HNRNPMP52272 730 aaKnown RBP eCLIP24.11■■□□□ 1.451e-8■■■■■ 30.5
GYPC-202ENST00000356887 ROCK2O75116 1388 aaKnown RBP24.1■■□□□ 1.45
GYPC-202ENST00000356887 POLR3GLQ9BT43 218 aa24.08■■□□□ 1.45
GYPC-202ENST00000356887 CARD11Q9BXL7 1154 aa24.07■■□□□ 1.44
GYPC-202ENST00000356887 RIMBP3CA6NJZ7 1639 aa24.05■■□□□ 1.44
GYPC-202ENST00000356887 RIMBP3BA6NNM3 1639 aa24.05■■□□□ 1.44
GYPC-202ENST00000356887 RIMBP3Q9UFD9 1639 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms