RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 CC2D2AQ9P2K1 1620 aa18.03■□□□□ 0.48
NCDN-201ENST00000356090 PAK3O75914 559 aaPredicted RBP18.02■□□□□ 0.47
NCDN-201ENST00000356090 SUPT6HQ7KZ85 1726 aaKnown RBP18.01■□□□□ 0.47
NCDN-201ENST00000356090 DNAJC5BQ9UF47 199 aa18.01■□□□□ 0.47
NCDN-201ENST00000356090 CFDP1Q9UEE9 299 aaPredicted RBP18■□□□□ 0.47
NCDN-201ENST00000356090 CDK13Q14004 1512 aaKnown RBP17.99■□□□□ 0.47
NCDN-201ENST00000356090 EHBP1L1Q8N3D4 1523 aa17.99■□□□□ 0.47
NCDN-201ENST00000356090 PKD2Q13563 968 aa17.98■□□□□ 0.47
NCDN-201ENST00000356090 ZBTB47Q9UFB7 747 aaPredicted RBP17.98■□□□□ 0.47
NCDN-201ENST00000356090 CARD11Q9BXL7 1154 aa17.98■□□□□ 0.47
NCDN-201ENST00000356090 NUDCQ9Y266 331 aa17.98■□□□□ 0.47
NCDN-201ENST00000356090 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
NCDN-201ENST00000356090 GRIN2BQ13224 1484 aa17.97■□□□□ 0.47
NCDN-201ENST00000356090 CTTNBP2Q8WZ74 1663 aa17.96■□□□□ 0.47
NCDN-201ENST00000356090 NCOA1Q15788 1441 aa17.96■□□□□ 0.47
NCDN-201ENST00000356090 CUL7Q14999 1698 aa17.96■□□□□ 0.47
NCDN-201ENST00000356090 KDM6BO15054 1643 aa17.94■□□□□ 0.46
NCDN-201ENST00000356090 MAGI3Q5TCQ9 1506 aa17.94■□□□□ 0.46
NCDN-201ENST00000356090 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
NCDN-201ENST00000356090 KDM5BQ9UGL1 1544 aa17.93■□□□□ 0.46
NCDN-201ENST00000356090 USP47Q96K76 1375 aa17.92■□□□□ 0.46
NCDN-201ENST00000356090 ANKRD30BQ9BXX2 1392 aa17.92■□□□□ 0.46
NCDN-201ENST00000356090 UGGT2Q9NYU1 1516 aa17.91■□□□□ 0.46
NCDN-201ENST00000356090 EPRSP07814 1512 aaKnown RBP17.9■□□□□ 0.46
NCDN-201ENST00000356090 RGL3Q3MIN7 710 aa17.89■□□□□ 0.46
NCDN-201ENST00000356090 DENND4BO75064 1496 aaPredicted RBP17.89■□□□□ 0.46
NCDN-201ENST00000356090 DCAF11Q8TEB1 546 aa17.89■□□□□ 0.45
NCDN-201ENST00000356090 LAS1LQ9Y4W2 734 aaKnown RBP17.89■□□□□ 0.45
NCDN-201ENST00000356090 PDS5BQ9NTI5 1447 aa17.87■□□□□ 0.45
NCDN-201ENST00000356090 ST20-MTHFSA0A0A6YYL1 179 aa17.87■□□□□ 0.45
NCDN-201ENST00000356090 MYT1LQ9UL68 1186 aa17.87■□□□□ 0.45
NCDN-201ENST00000356090 EXOC6Q8TAG9 804 aa17.85■□□□□ 0.45
NCDN-201ENST00000356090 IPO9Q96P70 1041 aaKnown RBP17.85■□□□□ 0.45
NCDN-201ENST00000356090 DAPK1P53355 1430 aa17.85■□□□□ 0.45
NCDN-201ENST00000356090 RPRD2Q5VT52 1461 aaKnown RBP17.84■□□□□ 0.45
NCDN-201ENST00000356090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.84■□□□□ 0.45
NCDN-201ENST00000356090 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.45
NCDN-201ENST00000356090 LRRIQ1Q96JM4 1722 aa17.83■□□□□ 0.44
NCDN-201ENST00000356090 CC2D1BQ5T0F9 858 aaKnown RBP17.82■□□□□ 0.44
NCDN-201ENST00000356090 MIA2Q96PC5 1412 aa17.82■□□□□ 0.44
NCDN-201ENST00000356090 PNISRQ8TF01 805 aaKnown RBP17.82■□□□□ 0.44
NCDN-201ENST00000356090 ABCC5O15440 1437 aa17.82■□□□□ 0.44
NCDN-201ENST00000356090 NUP155O75694 1391 aa17.82■□□□□ 0.44
NCDN-201ENST00000356090 SAMD9Q5K651 1589 aa17.81■□□□□ 0.44
NCDN-201ENST00000356090 RTN4Q9NQC3 1192 aaKnown RBP17.81■□□□□ 0.44
NCDN-201ENST00000356090 SMG6Q86US8 1419 aaKnown RBP17.8■□□□□ 0.44
NCDN-201ENST00000356090 HECW1Q76N89 1606 aa17.8■□□□□ 0.44
NCDN-201ENST00000356090 PLIN1O60240 522 aa17.8■□□□□ 0.44
NCDN-201ENST00000356090 TSPY4P0CV99 314 aa17.8■□□□□ 0.44
NCDN-201ENST00000356090 TSPY10P0CW01 314 aa17.8■□□□□ 0.44
NCDN-201ENST00000356090 RCAN3Q9UKA8 241 aa17.79■□□□□ 0.44
NCDN-201ENST00000356090 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
NCDN-201ENST00000356090 TCOF1Q13428 1488 aaKnown RBP17.78■□□□□ 0.44
NCDN-201ENST00000356090 SKAP1Q86WV1 359 aa17.77■□□□□ 0.44
NCDN-201ENST00000356090 PRG4Q92954 1404 aaPredicted RBP17.77■□□□□ 0.44
NCDN-201ENST00000356090 RRP1P56182 461 aaKnown RBP17.76■□□□□ 0.43
NCDN-201ENST00000356090 TEX14Q8IWB6 1497 aa17.76■□□□□ 0.43
NCDN-201ENST00000356090 CDCA7LQ96GN5 454 aa17.75■□□□□ 0.43
NCDN-201ENST00000356090 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
NCDN-201ENST00000356090 DHX29Q7Z478 1369 aaKnown RBP17.75■□□□□ 0.43
NCDN-201ENST00000356090 NEFMP07197 916 aa17.75■□□□□ 0.43
NCDN-201ENST00000356090 DAXXQ9UER7 740 aaPredicted RBP17.74■□□□□ 0.43
NCDN-201ENST00000356090 PLEKHD1A6NEE1 506 aa17.73■□□□□ 0.43
NCDN-201ENST00000356090 IQGAP2Q13576 1575 aa17.73■□□□□ 0.43
NCDN-201ENST00000356090 HNRNPMP52272 730 aaKnown RBP eCLIP17.73■□□□□ 0.43
NCDN-201ENST00000356090 SPATA31E1Q6ZUB1 1445 aa17.73■□□□□ 0.43
NCDN-201ENST00000356090 GCC2Q8IWJ2 1684 aa17.72■□□□□ 0.43
NCDN-201ENST00000356090 ANKRD30AQ9BXX3 1397 aa17.72■□□□□ 0.43
NCDN-201ENST00000356090 KIF15Q9NS87 1388 aa17.72■□□□□ 0.43
NCDN-201ENST00000356090 MYBBP1AQ9BQG0 1328 aaKnown RBP17.72■□□□□ 0.43
NCDN-201ENST00000356090 ROCK2O75116 1388 aaKnown RBP17.72■□□□□ 0.43
NCDN-201ENST00000356090 ROCK1Q13464 1354 aa17.72■□□□□ 0.43
NCDN-201ENST00000356090 PDE4AP27815 886 aa17.7■□□□□ 0.42
NCDN-201ENST00000356090 ARHGEF11O15085 1522 aa17.7■□□□□ 0.42
NCDN-201ENST00000356090 KIAA1107Q9UPP5 1409 aa17.7■□□□□ 0.42
NCDN-201ENST00000356090 ABCA5Q8WWZ7 1642 aa17.7■□□□□ 0.42
NCDN-201ENST00000356090 RALBP1Q15311 655 aa17.69■□□□□ 0.42
NCDN-201ENST00000356090 ANKRD50Q9ULJ7 1429 aa17.68■□□□□ 0.42
NCDN-201ENST00000356090 NLRP13Q86W25 1043 aa17.67■□□□□ 0.42
NCDN-201ENST00000356090 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
NCDN-201ENST00000356090 TCERG1O14776 1098 aaKnown RBP17.66■□□□□ 0.42
NCDN-201ENST00000356090 SLC4A3P48751 1232 aa17.66■□□□□ 0.42
NCDN-201ENST00000356090 NBPF1Q3BBV0 1214 aa17.66■□□□□ 0.42
NCDN-201ENST00000356090 PZPP20742 1482 aa17.64■□□□□ 0.42
NCDN-201ENST00000356090 WDR62O43379 1518 aa17.64■□□□□ 0.41
NCDN-201ENST00000356090 CRBNQ96SW2 442 aa17.63■□□□□ 0.41
NCDN-201ENST00000356090 CAMSAP2Q08AD1 1489 aa17.63■□□□□ 0.41
NCDN-201ENST00000356090 NUP153P49790 1475 aaKnown RBP17.61■□□□□ 0.41
NCDN-201ENST00000356090 PLB1Q6P1J6 1458 aa17.61■□□□□ 0.41
NCDN-201ENST00000356090 IL27Q8NEV9 243 aa17.61■□□□□ 0.41
NCDN-201ENST00000356090 BRD4O60885 1362 aaPredicted RBP17.6■□□□□ 0.41
NCDN-201ENST00000356090 RGS3P49796 1198 aa17.6■□□□□ 0.41
NCDN-201ENST00000356090 PANK3Q9H999 370 aa17.6■□□□□ 0.41
NCDN-201ENST00000356090 ZNF608Q9ULD9 1512 aaPredicted RBP17.6■□□□□ 0.41
NCDN-201ENST00000356090 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
NCDN-201ENST00000356090 TROQ12816 1431 aaPredicted RBP17.59■□□□□ 0.41
NCDN-201ENST00000356090 ARID4BQ4LE39 1312 aaPredicted RBP17.59■□□□□ 0.41
NCDN-201ENST00000356090 WDR43Q15061 677 aaKnown RBP eCLIP17.59■□□□□ 0.41
NCDN-201ENST00000356090 JPH4Q96JJ6 628 aa17.59■□□□□ 0.41
NCDN-201ENST00000356090 BCORL1Q5H9F3 1711 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms